| Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
|---|---|
| Accession | NC_005861 |
| Length | 2,414,465 |
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The map label for this gene is 46447348
Identifier: 46447348
GI number: 46447348
Start: 2052603
End: 2053100
Strand: Direct
Name: 46447348
Synonym: pc1714
Alternate gene names: NA
Gene position: 2052603-2053100 (Clockwise)
Preceding gene: 46447345
Following gene: 46447349
Centisome position: 85.01
GC content: 31.12
Gene sequence:
>498_bases ATGAATGTTTATGTAAGTACTGGAACTGTTATTAATCATCAATTCAATTATCGTGTTGATATGATTTATTCAAAATTACG GACTCACACGAATATCATAACTTCTTCATTATCTAATACTTTAAAAAAGATCGAGATATTTATTAGAAATAATTTGCATA ATATTTTATTTCTAAGCGCTTCTTGTGCAACGGCTTATTTTTCACCTTCTTTATTTATAATGGGCGCAGTATTAGCCATT GTCTTGCGATTTGAAGTAAGATATTTATTTAACGAATATATCAAGAAAGAACATAACCCCTACTTAGATGGCACAAAATT CGGCCCAAATTATGTCAATAACACTAGTTTGCTTATTGCAACAGTAGCTGCTATAGATTCAATCGCCTTAGGAACATTTT TTACTACTAATTACATCGGGGTTAGTTTATTTCCATTTGCTGGTGGTTTAGCAGCCGGTAATATTTTAGCCCAAAAGGGA ATAGATTTACTTGTCTAA
Upstream 100 bases:
>100_bases ATAATAAATTAATAAATTAATACTAAAATTATAATTAAAAAACATAAATAAATGAAATAAAACTAATTTTTTAAAAAACA AAAAAAAGGTGAAGTTTAAT
Downstream 100 bases:
>100_bases TCCTATCTAATTATCTGGCTAAGCTTATTATTCTTTAAAAAATAAGCTTAGTCTTTTTGCTTTTGATAAAATTTACTTTT CAAGAATAAATTTGCTCCGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 165; Mature: 165
Protein sequence:
>165_residues MNVYVSTGTVINHQFNYRVDMIYSKLRTHTNIITSSLSNTLKKIEIFIRNNLHNILFLSASCATAYFSPSLFIMGAVLAI VLRFEVRYLFNEYIKKEHNPYLDGTKFGPNYVNNTSLLIATVAAIDSIALGTFFTTNYIGVSLFPFAGGLAAGNILAQKG IDLLV
Sequences:
>Translated_165_residues MNVYVSTGTVINHQFNYRVDMIYSKLRTHTNIITSSLSNTLKKIEIFIRNNLHNILFLSASCATAYFSPSLFIMGAVLAI VLRFEVRYLFNEYIKKEHNPYLDGTKFGPNYVNNTSLLIATVAAIDSIALGTFFTTNYIGVSLFPFAGGLAAGNILAQKG IDLLV >Mature_165_residues MNVYVSTGTVINHQFNYRVDMIYSKLRTHTNIITSSLSNTLKKIEIFIRNNLHNILFLSASCATAYFSPSLFIMGAVLAI VLRFEVRYLFNEYIKKEHNPYLDGTKFGPNYVNNTSLLIATVAAIDSIALGTFFTTNYIGVSLFPFAGGLAAGNILAQKG IDLLV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18328; Mature: 18328
Theoretical pI: Translated: 9.51; Mature: 9.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNVYVSTGTVINHQFNYRVDMIYSKLRTHTNIITSSLSNTLKKIEIFIRNNLHNILFLSA CEEEEECCEEEECEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEC SCATAYFSPSLFIMGAVLAIVLRFEVRYLFNEYIKKEHNPYLDGTKFGPNYVNNTSLLIA HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHH TVAAIDSIALGTFFTTNYIGVSLFPFAGGLAAGNILAQKGIDLLV HHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHCCCCCCC >Mature Secondary Structure MNVYVSTGTVINHQFNYRVDMIYSKLRTHTNIITSSLSNTLKKIEIFIRNNLHNILFLSA CEEEEECCEEEECEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEC SCATAYFSPSLFIMGAVLAIVLRFEVRYLFNEYIKKEHNPYLDGTKFGPNYVNNTSLLIA HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHH TVAAIDSIALGTFFTTNYIGVSLFPFAGGLAAGNILAQKGIDLLV HHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA