Definition Candidatus Protochlamydia amoebophila UWE25, complete genome.
Accession NC_005861
Length 2,414,465

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The map label for this gene is 46447338

Identifier: 46447338

GI number: 46447338

Start: 2042177

End: 2043535

Strand: Direct

Name: 46447338

Synonym: pc1704

Alternate gene names: NA

Gene position: 2042177-2043535 (Clockwise)

Preceding gene: 46447336

Following gene: 46447339

Centisome position: 84.58

GC content: 31.42

Gene sequence:

>1359_bases
ATGCCTCCAATAGGGCGTAAAACTAAAATTGTGTTAAGTGATTATCCTTACAAAAGAGATATCGAAAATCGTTTATTACT
TTCACATTTAAGTATTCTAGAAGTCAAAATCTTGCAAGAAATCCTTCACTCTTCCCTGAAGATCTCTATTAAAGAGTTAG
CAGAAGAATTAGAAATTTCTTCACCTATACTGATTTCGCACCTAGATAAACTTAGTGCAACGAAATTGTTCAAACGAAAT
GAGTTGACTTTAATTGTTGATAAAGAAGTACGAAAGTATTTTGAAATTCAATTAGAGAAATTTGAAGAAGATTTTGAACC
TAATCTAGAATTTTTGCAAAGCCTTCTTAATAAAGTTCCTATTCACGTTCTTCCTGTTTGGTATGCTATTCCTAGAAGTT
CAGATCATATCTTTTCTTCTATTATTGAAAAATATTTTCAAACACCCAAAATGTATCGAGAATATTTAGGAGATCTTCAA
TTTGAAGATCCTATTTTAAAAGAAATAATGAAAGATGTTTACGAAGCGCCAGATTTTACTATAACTGCAGTCGCTCTTAT
TGATAAATATAAGCTCTCTAGAGAAAAATTCGAAGAGAACCTTTTACTACTCGAATACTACTTTGTATGTTGTTTAAGAT
ATAAAAAAGTTGGTGAATACTGGGAAGAAATTGTTACTCCTTTTCATGAATACCATGAATACCTTCTCGTTAAAGCTCAG
AATACGCCAAAAGCAATCGCTGATAAGTCAACAATTCAACATACACTTTCTACAGAATTTGGATATATCAGAGAAGTTGA
AGCTATTCTTTCTAATTGTAAAAGTAAAAAAGAACTACATCTTCTATCAATGAATTATTTATCTAATTCAACAGAATTTA
AATCATTAATTGATAAACTCGTTTATTTTGGTTTCCTAAAAAAAATTCAAGATATGATGGTTGCAACTGAAAAAGGAATG
CTATGGTTAAAAAGACCTCCCATTGCGCAAATGACTTCACTTGCTTGGGATTGGTTAAGCGAACCTTTCGAAGCAGACGA
TTTATCAATTTATTGGAATCCACGTAATTTTCGTTTAATTGAAAAATATCTCAAGCAATTCAAATATCATGATTGGGTTT
ATTTGGAAGATTTCATTAAAAGTTTTATGGGCCCTATGGGAGATCGCGGACCTATCAATCTTGTTAACAAAGGAAAAAAA
TGGAAATATGCTCTTCCCGTTTACCAATCGGAAGAGCTTAATTTTATTCGGGAAGTGATTACCAAAACTCTTTTCCAACT
AGGGATTGTTTCAACAGGAATACATCAAAATCAAGTCTGTTTTACTGTCACTGCATTTGGACATCAGTTTATCCACTAA

Upstream 100 bases:

>100_bases
AATAATTTCAATCAATAATCTTGTGATTCATGGGAATGAAATTTTTAAACATCCCCCGAAACTTCAGTAATTTTTTGTTA
AAATAGGTGTGCCAATGAAT

Downstream 100 bases:

>100_bases
AAACTAACCACCATTAACTTTTTGCGTATGTAGCTAACAAAAAATTTAATTTTGAAATTAGCACATACGTAAATTGCGCT
ATTAGGATGGAAGGGAAAAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 452; Mature: 451

Protein sequence:

>452_residues
MPPIGRKTKIVLSDYPYKRDIENRLLLSHLSILEVKILQEILHSSLKISIKELAEELEISSPILISHLDKLSATKLFKRN
ELTLIVDKEVRKYFEIQLEKFEEDFEPNLEFLQSLLNKVPIHVLPVWYAIPRSSDHIFSSIIEKYFQTPKMYREYLGDLQ
FEDPILKEIMKDVYEAPDFTITAVALIDKYKLSREKFEENLLLLEYYFVCCLRYKKVGEYWEEIVTPFHEYHEYLLVKAQ
NTPKAIADKSTIQHTLSTEFGYIREVEAILSNCKSKKELHLLSMNYLSNSTEFKSLIDKLVYFGFLKKIQDMMVATEKGM
LWLKRPPIAQMTSLAWDWLSEPFEADDLSIYWNPRNFRLIEKYLKQFKYHDWVYLEDFIKSFMGPMGDRGPINLVNKGKK
WKYALPVYQSEELNFIREVITKTLFQLGIVSTGIHQNQVCFTVTAFGHQFIH

Sequences:

>Translated_452_residues
MPPIGRKTKIVLSDYPYKRDIENRLLLSHLSILEVKILQEILHSSLKISIKELAEELEISSPILISHLDKLSATKLFKRN
ELTLIVDKEVRKYFEIQLEKFEEDFEPNLEFLQSLLNKVPIHVLPVWYAIPRSSDHIFSSIIEKYFQTPKMYREYLGDLQ
FEDPILKEIMKDVYEAPDFTITAVALIDKYKLSREKFEENLLLLEYYFVCCLRYKKVGEYWEEIVTPFHEYHEYLLVKAQ
NTPKAIADKSTIQHTLSTEFGYIREVEAILSNCKSKKELHLLSMNYLSNSTEFKSLIDKLVYFGFLKKIQDMMVATEKGM
LWLKRPPIAQMTSLAWDWLSEPFEADDLSIYWNPRNFRLIEKYLKQFKYHDWVYLEDFIKSFMGPMGDRGPINLVNKGKK
WKYALPVYQSEELNFIREVITKTLFQLGIVSTGIHQNQVCFTVTAFGHQFIH
>Mature_451_residues
PPIGRKTKIVLSDYPYKRDIENRLLLSHLSILEVKILQEILHSSLKISIKELAEELEISSPILISHLDKLSATKLFKRNE
LTLIVDKEVRKYFEIQLEKFEEDFEPNLEFLQSLLNKVPIHVLPVWYAIPRSSDHIFSSIIEKYFQTPKMYREYLGDLQF
EDPILKEIMKDVYEAPDFTITAVALIDKYKLSREKFEENLLLLEYYFVCCLRYKKVGEYWEEIVTPFHEYHEYLLVKAQN
TPKAIADKSTIQHTLSTEFGYIREVEAILSNCKSKKELHLLSMNYLSNSTEFKSLIDKLVYFGFLKKIQDMMVATEKGML
WLKRPPIAQMTSLAWDWLSEPFEADDLSIYWNPRNFRLIEKYLKQFKYHDWVYLEDFIKSFMGPMGDRGPINLVNKGKKW
KYALPVYQSEELNFIREVITKTLFQLGIVSTGIHQNQVCFTVTAFGHQFIH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 53469; Mature: 53338

Theoretical pI: Translated: 6.85; Mature: 6.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPPIGRKTKIVLSDYPYKRDIENRLLLSHLSILEVKILQEILHSSLKISIKELAEELEIS
CCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
SPILISHLDKLSATKLFKRNELTLIVDKEVRKYFEIQLEKFEEDFEPNLEFLQSLLNKVP
CCHHHHHHHHHHHHHHHHCCCEEEEECHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCC
IHVLPVWYAIPRSSDHIFSSIIEKYFQTPKMYREYLGDLQFEDPILKEIMKDVYEAPDFT
EEEEEHHHCCCCCCHHHHHHHHHHHHHCHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCE
ITAVALIDKYKLSREKFEENLLLLEYYFVCCLRYKKVGEYWEEIVTPFHEYHEYLLVKAQ
EHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECC
NTPKAIADKSTIQHTLSTEFGYIREVEAILSNCKSKKELHLLSMNYLSNSTEFKSLIDKL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEHHHHCCCHHHHHHHHHH
VYFGFLKKIQDMMVATEKGMLWLKRPPIAQMTSLAWDWLSEPFEADDLSIYWNPRNFRLI
HHHHHHHHHHHHHHHHHCCEEEECCCCHHHHHHHHHHHHCCCCCCCCEEEEECCCCHHHH
EKYLKQFKYHDWVYLEDFIKSFMGPMGDRGPINLVNKGKKWKYALPVYQSEELNFIREVI
HHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHH
TKTLFQLGIVSTGIHQNQVCFTVTAFGHQFIH
HHHHHHHHHHHCCCCCCCEEEEEEHHHHHHCC
>Mature Secondary Structure 
PPIGRKTKIVLSDYPYKRDIENRLLLSHLSILEVKILQEILHSSLKISIKELAEELEIS
CCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
SPILISHLDKLSATKLFKRNELTLIVDKEVRKYFEIQLEKFEEDFEPNLEFLQSLLNKVP
CCHHHHHHHHHHHHHHHHCCCEEEEECHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCC
IHVLPVWYAIPRSSDHIFSSIIEKYFQTPKMYREYLGDLQFEDPILKEIMKDVYEAPDFT
EEEEEHHHCCCCCCHHHHHHHHHHHHHCHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCE
ITAVALIDKYKLSREKFEENLLLLEYYFVCCLRYKKVGEYWEEIVTPFHEYHEYLLVKAQ
EHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECC
NTPKAIADKSTIQHTLSTEFGYIREVEAILSNCKSKKELHLLSMNYLSNSTEFKSLIDKL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEHHHHCCCHHHHHHHHHH
VYFGFLKKIQDMMVATEKGMLWLKRPPIAQMTSLAWDWLSEPFEADDLSIYWNPRNFRLI
HHHHHHHHHHHHHHHHHCCEEEECCCCHHHHHHHHHHHHCCCCCCCCEEEEECCCCHHHH
EKYLKQFKYHDWVYLEDFIKSFMGPMGDRGPINLVNKGKKWKYALPVYQSEELNFIREVI
HHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHH
TKTLFQLGIVSTGIHQNQVCFTVTAFGHQFIH
HHHHHHHHHHHCCCCCCCEEEEEEHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA