| Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
|---|---|
| Accession | NC_005861 |
| Length | 2,414,465 |
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The map label for this gene is 46447324
Identifier: 46447324
GI number: 46447324
Start: 2027067
End: 2027459
Strand: Direct
Name: 46447324
Synonym: pc1690
Alternate gene names: NA
Gene position: 2027067-2027459 (Clockwise)
Preceding gene: 46447321
Following gene: 46447325
Centisome position: 83.96
GC content: 33.33
Gene sequence:
>393_bases ATGCAAAAAGGACATCTTCTTCAATTTTGTTGCCAGACATGTCAACATCTCATTCAATTTTCGGTATTTGAATTAGAAAA AGCAGAACAAGGGAGAATCCCTTGTCATGAATGTGGAATAATTTATGACTTCAGTGATGAATCTTTGTTAAGGCAACTAC GTAAGTTTGAAAAACTTTGTCGCCAAATACATCTTTCTGAAGAAATTTTATCTAACACTTCAGTCGGTATTTATCTCAAT GATCGAGAAATCAAAATTCCCTATAAATTACTCCTAACTCGTTTGAATTCTACTTTGGATTTAACTGTGGGGGATCGCCC TTTAACGATTACATTTCGAATTGAACCAACTTTAGAAATGCCCTCTTTAGACACTTTTTCAAAAACACATTAA
Upstream 100 bases:
>100_bases TTATTAAATAATTAAAAAATTTAGTTAAAAAATGGAAAGCTATTGCTTAGACCATTTAAACCTGATAAGATAAATAAAAA TCAGTAAGGTCTTAATTTTT
Downstream 100 bases:
>100_bases AGCCCAGGAAGGAGATCTTCATGGAAAAAAATAAATTAGATCAACTTAAAAGCATGACAACTATCGTCATCGATACAGGT GACATTGAAGCTATCAAGGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 130; Mature: 130
Protein sequence:
>130_residues MQKGHLLQFCCQTCQHLIQFSVFELEKAEQGRIPCHECGIIYDFSDESLLRQLRKFEKLCRQIHLSEEILSNTSVGIYLN DREIKIPYKLLLTRLNSTLDLTVGDRPLTITFRIEPTLEMPSLDTFSKTH
Sequences:
>Translated_130_residues MQKGHLLQFCCQTCQHLIQFSVFELEKAEQGRIPCHECGIIYDFSDESLLRQLRKFEKLCRQIHLSEEILSNTSVGIYLN DREIKIPYKLLLTRLNSTLDLTVGDRPLTITFRIEPTLEMPSLDTFSKTH >Mature_130_residues MQKGHLLQFCCQTCQHLIQFSVFELEKAEQGRIPCHECGIIYDFSDESLLRQLRKFEKLCRQIHLSEEILSNTSVGIYLN DREIKIPYKLLLTRLNSTLDLTVGDRPLTITFRIEPTLEMPSLDTFSKTH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15172; Mature: 15172
Theoretical pI: Translated: 6.66; Mature: 6.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.6 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 4.6 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQKGHLLQFCCQTCQHLIQFSVFELEKAEQGRIPCHECGIIYDFSDESLLRQLRKFEKLC CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCEEEECCCHHHHHHHHHHHHHH RQIHLSEEILSNTSVGIYLNDREIKIPYKLLLTRLNSTLDLTVGDRPLTITFRIEPTLEM HHHHHHHHHHCCCCEEEEECCCEEECHHHHHHHHHCCEEEEEECCCEEEEEEEECCCCCC PSLDTFSKTH CCCCCCCCCC >Mature Secondary Structure MQKGHLLQFCCQTCQHLIQFSVFELEKAEQGRIPCHECGIIYDFSDESLLRQLRKFEKLC CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCEEEECCCHHHHHHHHHHHHHH RQIHLSEEILSNTSVGIYLNDREIKIPYKLLLTRLNSTLDLTVGDRPLTITFRIEPTLEM HHHHHHHHHHCCCCEEEEECCCEEECHHHHHHHHHCCEEEEEECCCEEEEEEEECCCCCC PSLDTFSKTH CCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA