Definition Candidatus Protochlamydia amoebophila UWE25, complete genome.
Accession NC_005861
Length 2,414,465

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The map label for this gene is 46447324

Identifier: 46447324

GI number: 46447324

Start: 2027067

End: 2027459

Strand: Direct

Name: 46447324

Synonym: pc1690

Alternate gene names: NA

Gene position: 2027067-2027459 (Clockwise)

Preceding gene: 46447321

Following gene: 46447325

Centisome position: 83.96

GC content: 33.33

Gene sequence:

>393_bases
ATGCAAAAAGGACATCTTCTTCAATTTTGTTGCCAGACATGTCAACATCTCATTCAATTTTCGGTATTTGAATTAGAAAA
AGCAGAACAAGGGAGAATCCCTTGTCATGAATGTGGAATAATTTATGACTTCAGTGATGAATCTTTGTTAAGGCAACTAC
GTAAGTTTGAAAAACTTTGTCGCCAAATACATCTTTCTGAAGAAATTTTATCTAACACTTCAGTCGGTATTTATCTCAAT
GATCGAGAAATCAAAATTCCCTATAAATTACTCCTAACTCGTTTGAATTCTACTTTGGATTTAACTGTGGGGGATCGCCC
TTTAACGATTACATTTCGAATTGAACCAACTTTAGAAATGCCCTCTTTAGACACTTTTTCAAAAACACATTAA

Upstream 100 bases:

>100_bases
TTATTAAATAATTAAAAAATTTAGTTAAAAAATGGAAAGCTATTGCTTAGACCATTTAAACCTGATAAGATAAATAAAAA
TCAGTAAGGTCTTAATTTTT

Downstream 100 bases:

>100_bases
AGCCCAGGAAGGAGATCTTCATGGAAAAAAATAAATTAGATCAACTTAAAAGCATGACAACTATCGTCATCGATACAGGT
GACATTGAAGCTATCAAGGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 130; Mature: 130

Protein sequence:

>130_residues
MQKGHLLQFCCQTCQHLIQFSVFELEKAEQGRIPCHECGIIYDFSDESLLRQLRKFEKLCRQIHLSEEILSNTSVGIYLN
DREIKIPYKLLLTRLNSTLDLTVGDRPLTITFRIEPTLEMPSLDTFSKTH

Sequences:

>Translated_130_residues
MQKGHLLQFCCQTCQHLIQFSVFELEKAEQGRIPCHECGIIYDFSDESLLRQLRKFEKLCRQIHLSEEILSNTSVGIYLN
DREIKIPYKLLLTRLNSTLDLTVGDRPLTITFRIEPTLEMPSLDTFSKTH
>Mature_130_residues
MQKGHLLQFCCQTCQHLIQFSVFELEKAEQGRIPCHECGIIYDFSDESLLRQLRKFEKLCRQIHLSEEILSNTSVGIYLN
DREIKIPYKLLLTRLNSTLDLTVGDRPLTITFRIEPTLEMPSLDTFSKTH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15172; Mature: 15172

Theoretical pI: Translated: 6.66; Mature: 6.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.6 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
4.6 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQKGHLLQFCCQTCQHLIQFSVFELEKAEQGRIPCHECGIIYDFSDESLLRQLRKFEKLC
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCEEEECCCHHHHHHHHHHHHHH
RQIHLSEEILSNTSVGIYLNDREIKIPYKLLLTRLNSTLDLTVGDRPLTITFRIEPTLEM
HHHHHHHHHHCCCCEEEEECCCEEECHHHHHHHHHCCEEEEEECCCEEEEEEEECCCCCC
PSLDTFSKTH
CCCCCCCCCC
>Mature Secondary Structure
MQKGHLLQFCCQTCQHLIQFSVFELEKAEQGRIPCHECGIIYDFSDESLLRQLRKFEKLC
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCEEEECCCHHHHHHHHHHHHHH
RQIHLSEEILSNTSVGIYLNDREIKIPYKLLLTRLNSTLDLTVGDRPLTITFRIEPTLEM
HHHHHHHHHHCCCCEEEEECCCEEECHHHHHHHHHCCEEEEEECCCEEEEEEEECCCCCC
PSLDTFSKTH
CCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA