| Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
|---|---|
| Accession | NC_005861 |
| Length | 2,414,465 |
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The map label for this gene is talB
Identifier: 46447325
GI number: 46447325
Start: 2027480
End: 2028448
Strand: Direct
Name: talB
Synonym: pc1691
Alternate gene names: 46447325
Gene position: 2027480-2028448 (Clockwise)
Preceding gene: 46447324
Following gene: 46447329
Centisome position: 83.97
GC content: 36.64
Gene sequence:
>969_bases ATGGAAAAAAATAAATTAGATCAACTTAAAAGCATGACAACTATCGTCATCGATACAGGTGACATTGAAGCTATCAAGGA ATACAGCCCAACTGACGCTACAACAAACCCATCATTGATCTTATCTGCTGTAGAAAAACCTGCCTACAAACCTTTGATGG AAGAAGCTTACCACTACAGCCAAAAAGCTAAATCTTCTGGGGAGCAAATTTCTTTATTCTTAGATAAATTATTTGTTAAT GTCGGTTGTGAAATTCTAAAACTCATTCCAGGTCGTGTTTCAACAGAAGTGGATGCTCGTCTTTCTTTTGATGTAGAAGG AAGTATTCAAAAAGCACAATCTCTTATCGCCCTTTATAAAGAAATGGGCATAGAAAAAGAACGGATACTTATTAAGCTGG CTTCCACGTGGGAAGGTGGCCTTGCGGCTAAACAATTAGAAAAAATGGGTATCCACTGCAACATGACACTTCTTTTTAGT ATGCCACAAGCAATCCATTGTGCAGAAGCACAAGCCACTTTAATTTCCCCTTTTGTTGGACGCATTCTTGACTGGTATAA AAAACACGATAATGTTCCAGGTTATGCTCCTGCAGAAGATCCTGGTGTTAAATCTGTAACAACTATTTATCACTATTTCA AAAAATTTAGCTATAAAACGCAAATTATGGGAGCTAGCTTTCGTAATAAAGAAGAAATCTTAGAACTCGCTGGCTGTGAT TTATTAACCATTTCACCTCACTTTTTACAAGAACTTCATGATGCAAGCGGAAATGTCGAACAAAAACTCGATGCAGCTAA ATCTAAACAATTGAATATTGAGCCTATCAAAATGAACGAAAAAGCATTTCGGCTCGCCCTTAATGATGATGCTATGGCTA CCGAAAAACTTTCTGAAGGAATTCGTAATTTTGCTAAAGATGCGCAGAAGTTAGAAAAAATGCTTCGAACTACATACAAA ATTGGTTAA
Upstream 100 bases:
>100_bases ATCGCCCTTTAACGATTACATTTCGAATTGAACCAACTTTAGAAATGCCCTCTTTAGACACTTTTTCAAAAACACATTAA AGCCCAGGAAGGAGATCTTC
Downstream 100 bases:
>100_bases AGAACTTTTCATGTCATCGTTAAGTATGTTTTTACAAAATTTTACTTGACGATGCTTCTTATCTTACTTCATTCAATAAA AAAATCTTATTTATTGCGAA
Product: transaldolase B
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 322; Mature: 322
Protein sequence:
>322_residues MEKNKLDQLKSMTTIVIDTGDIEAIKEYSPTDATTNPSLILSAVEKPAYKPLMEEAYHYSQKAKSSGEQISLFLDKLFVN VGCEILKLIPGRVSTEVDARLSFDVEGSIQKAQSLIALYKEMGIEKERILIKLASTWEGGLAAKQLEKMGIHCNMTLLFS MPQAIHCAEAQATLISPFVGRILDWYKKHDNVPGYAPAEDPGVKSVTTIYHYFKKFSYKTQIMGASFRNKEEILELAGCD LLTISPHFLQELHDASGNVEQKLDAAKSKQLNIEPIKMNEKAFRLALNDDAMATEKLSEGIRNFAKDAQKLEKMLRTTYK IG
Sequences:
>Translated_322_residues MEKNKLDQLKSMTTIVIDTGDIEAIKEYSPTDATTNPSLILSAVEKPAYKPLMEEAYHYSQKAKSSGEQISLFLDKLFVN VGCEILKLIPGRVSTEVDARLSFDVEGSIQKAQSLIALYKEMGIEKERILIKLASTWEGGLAAKQLEKMGIHCNMTLLFS MPQAIHCAEAQATLISPFVGRILDWYKKHDNVPGYAPAEDPGVKSVTTIYHYFKKFSYKTQIMGASFRNKEEILELAGCD LLTISPHFLQELHDASGNVEQKLDAAKSKQLNIEPIKMNEKAFRLALNDDAMATEKLSEGIRNFAKDAQKLEKMLRTTYK IG >Mature_322_residues MEKNKLDQLKSMTTIVIDTGDIEAIKEYSPTDATTNPSLILSAVEKPAYKPLMEEAYHYSQKAKSSGEQISLFLDKLFVN VGCEILKLIPGRVSTEVDARLSFDVEGSIQKAQSLIALYKEMGIEKERILIKLASTWEGGLAAKQLEKMGIHCNMTLLFS MPQAIHCAEAQATLISPFVGRILDWYKKHDNVPGYAPAEDPGVKSVTTIYHYFKKFSYKTQIMGASFRNKEEILELAGCD LLTISPHFLQELHDASGNVEQKLDAAKSKQLNIEPIKMNEKAFRLALNDDAMATEKLSEGIRNFAKDAQKLEKMLRTTYK IG
Specific function: Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
COG id: COG0176
COG function: function code G; Transaldolase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transaldolase family. Type 1 subfamily
Homologues:
Organism=Homo sapiens, GI5803187, Length=312, Percent_Identity=61.8589743589744, Blast_Score=374, Evalue=1e-104, Organism=Escherichia coli, GI1786189, Length=313, Percent_Identity=57.1884984025559, Blast_Score=357, Evalue=1e-100, Organism=Escherichia coli, GI1788807, Length=313, Percent_Identity=55.9105431309904, Blast_Score=337, Evalue=7e-94, Organism=Caenorhabditis elegans, GI25153750, Length=313, Percent_Identity=58.4664536741214, Blast_Score=360, Evalue=1e-100, Organism=Caenorhabditis elegans, GI25153752, Length=161, Percent_Identity=57.1428571428571, Blast_Score=196, Evalue=2e-50, Organism=Caenorhabditis elegans, GI17570473, Length=93, Percent_Identity=58.0645161290323, Blast_Score=107, Evalue=6e-24, Organism=Saccharomyces cerevisiae, GI6321480, Length=315, Percent_Identity=50.4761904761905, Blast_Score=309, Evalue=4e-85, Organism=Saccharomyces cerevisiae, GI6323386, Length=309, Percent_Identity=54.6925566343042, Blast_Score=305, Evalue=5e-84, Organism=Drosophila melanogaster, GI45549185, Length=317, Percent_Identity=58.9905362776025, Blast_Score=368, Evalue=1e-102,
Paralogues:
None
Copy number: 380 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 900 Molecules/Cell In: Stationary-Phase, Rich-Media (Based on E. coli). 100 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 60 Molecules/Cell In: Stationary Phase,
Swissprot (AC and ID): TAL_PARUW (Q6MAI4)
Other databases:
- EMBL: BX908798 - RefSeq: YP_008690.1 - ProteinModelPortal: Q6MAI4 - SMR: Q6MAI4 - STRING: Q6MAI4 - GeneID: 2781130 - GenomeReviews: BX908798_GR - KEGG: pcu:pc1691 - NMPDR: fig|264201.1.peg.1691 - eggNOG: COG0176 - HOGENOM: HBG286747 - OMA: DTGDFHA - PhylomeDB: Q6MAI4 - ProtClustDB: PRK05269 - BioCyc: CPRO264201:PC1691-MONOMER - GO: GO:0005737 - HAMAP: MF_00492 - InterPro: IPR013785 - InterPro: IPR001585 - InterPro: IPR004730 - InterPro: IPR018225 - Gene3D: G3DSA:3.20.20.70 - PANTHER: PTHR10683 - PANTHER: PTHR10683:SF3 - TIGRFAMs: TIGR00874
Pfam domain/function: PF00923 Transaldolase
EC number: =2.2.1.2
Molecular weight: Translated: 36045; Mature: 36045
Theoretical pI: Translated: 6.88; Mature: 6.88
Prosite motif: PS01054 TRANSALDOLASE_1; PS00958 TRANSALDOLASE_2
Important sites: ACT_SITE 132-132
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEKNKLDQLKSMTTIVIDTGDIEAIKEYSPTDATTNPSLILSAVEKPAYKPLMEEAYHYS CCCHHHHHHHCCEEEEEECCCHHHHHHCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHH QKAKSSGEQISLFLDKLFVNVGCEILKLIPGRVSTEVDARLSFDVEGSIQKAQSLIALYK HHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHH EMGIEKERILIKLASTWEGGLAAKQLEKMGIHCNMTLLFSMPQAIHCAEAQATLISPFVG HHCCCHHHEEEEEECCCCCCHHHHHHHHCCCCCCCHHEECCCHHHHHHHHHHHHHHHHHH RILDWYKKHDNVPGYAPAEDPGVKSVTTIYHYFKKFSYKTQIMGASFRNKEEILELAGCD HHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCC LLTISPHFLQELHDASGNVEQKLDAAKSKQLNIEPIKMNEKAFRLALNDDAMATEKLSEG EEEECHHHHHHHHHCCCCHHHHHHHHHCCCCCCCEEEECCCCEEEEECCCHHHHHHHHHH IRNFAKDAQKLEKMLRTTYKIG HHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MEKNKLDQLKSMTTIVIDTGDIEAIKEYSPTDATTNPSLILSAVEKPAYKPLMEEAYHYS CCCHHHHHHHCCEEEEEECCCHHHHHHCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHH QKAKSSGEQISLFLDKLFVNVGCEILKLIPGRVSTEVDARLSFDVEGSIQKAQSLIALYK HHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHH EMGIEKERILIKLASTWEGGLAAKQLEKMGIHCNMTLLFSMPQAIHCAEAQATLISPFVG HHCCCHHHEEEEEECCCCCCHHHHHHHHCCCCCCCHHEECCCHHHHHHHHHHHHHHHHHH RILDWYKKHDNVPGYAPAEDPGVKSVTTIYHYFKKFSYKTQIMGASFRNKEEILELAGCD HHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCC LLTISPHFLQELHDASGNVEQKLDAAKSKQLNIEPIKMNEKAFRLALNDDAMATEKLSEG EEEECHHHHHHHHHCCCCHHHHHHHHHCCCCCCCEEEECCCCEEEEECCCHHHHHHHHHH IRNFAKDAQKLEKMLRTTYKIG HHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA