Definition Candidatus Protochlamydia amoebophila UWE25, complete genome.
Accession NC_005861
Length 2,414,465

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The map label for this gene is 46447284

Identifier: 46447284

GI number: 46447284

Start: 1982447

End: 1982719

Strand: Direct

Name: 46447284

Synonym: pc1650

Alternate gene names: NA

Gene position: 1982447-1982719 (Clockwise)

Preceding gene: 46447282

Following gene: 46447285

Centisome position: 82.11

GC content: 37.0

Gene sequence:

>273_bases
TTGTCTCAAAAAAAAGTGGTAAGCTCACAAGCTCAAAGGAAAGCGACCGGTTATCTGAAAAAGCATTTTGAGATAAGCGA
AAGAAGAGGCTGTGAACTCATCAAAGTAGTGCGATCGACCATGCATAAAAGTCATGCTCGAGAGAACAAAGACTTAAAAG
AGCGTATTTTTCAGATTTCTTTAAAGCATAAAAGCTATGGCTATAGAAGAATCTCCGCTCTTCTTAAAAGAGAAGGATGC
TCGGTAAATCATAAAAATGTTTATCGCCTATAA

Upstream 100 bases:

>100_bases
AGTTTCGGAAGCCAAGTATCTAAAGGCTTTAGAAGAAGACGCAAAGCTAAAAGCGATGCTTGTGAAAGCGCTATTAAACA
ATTGAGCCCTTAAGGTTATA

Downstream 100 bases:

>100_bases
GTCGAAGAGTCGTTAAGTTTAAAAAGAAGAGTTAAGAAGAAGTTTGCCAATCGATTGAGAAAACCTCCTTTGAAAAAGGT
CACTGCTCAAATTGAAAATA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 90; Mature: 89

Protein sequence:

>90_residues
MSQKKVVSSQAQRKATGYLKKHFEISERRGCELIKVVRSTMHKSHARENKDLKERIFQISLKHKSYGYRRISALLKREGC
SVNHKNVYRL

Sequences:

>Translated_90_residues
MSQKKVVSSQAQRKATGYLKKHFEISERRGCELIKVVRSTMHKSHARENKDLKERIFQISLKHKSYGYRRISALLKREGC
SVNHKNVYRL
>Mature_89_residues
SQKKVVSSQAQRKATGYLKKHFEISERRGCELIKVVRSTMHKSHARENKDLKERIFQISLKHKSYGYRRISALLKREGCS
VNHKNVYRL

Specific function: Unknown

COG id: COG2801

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10631; Mature: 10499

Theoretical pI: Translated: 11.14; Mature: 11.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQKKVVSSQAQRKATGYLKKHFEISERRGCELIKVVRSTMHKSHARENKDLKERIFQIS
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
LKHKSYGYRRISALLKREGCSVNHKNVYRL
HHHCCCHHHHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure 
SQKKVVSSQAQRKATGYLKKHFEISERRGCELIKVVRSTMHKSHARENKDLKERIFQIS
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
LKHKSYGYRRISALLKREGCSVNHKNVYRL
HHHCCCHHHHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA