| Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
|---|---|
| Accession | NC_005861 |
| Length | 2,414,465 |
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The map label for this gene is 46447249
Identifier: 46447249
GI number: 46447249
Start: 1932011
End: 1932223
Strand: Direct
Name: 46447249
Synonym: pc1615
Alternate gene names: NA
Gene position: 1932011-1932223 (Clockwise)
Preceding gene: 46447248
Following gene: 46447250
Centisome position: 80.02
GC content: 36.15
Gene sequence:
>213_bases ATGAATAGTCTTTGCCTCGCATCTCTAGCCTTAGGCATTAATGATCCTAAAATTTGCCATTATAGTTCAAAACTTGGAGA TTTTGTAGGAAATAAGAAAAATGATCATTGGTTATGGCTCGTCTTACATAAAAAAAGTCGCCAAGTGCTTGCTAGGCAAG TGAGTCTTCGAGATAAAAAAAACAGCAGTGCTTCTTTTTGCAAAACTACCTGA
Upstream 100 bases:
>100_bases CCAGGCCTGGGCGCTCGTTGTCTATCCTATAAGTATATCGCATTAACGTAAGCGTTATGAGTATTCAAAAGAGGATATTA TAAATTTTTTATAGTATACT
Downstream 100 bases:
>100_bases ATCATTAAAAAAATCCTCTATTTCATTGATAAATTTAATGTCTATTATGAAACCATTCCTTGGAGCCAACATCAACCAGT TAGCAAGCAATCAGGTCAGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 70; Mature: 70
Protein sequence:
>70_residues MNSLCLASLALGINDPKICHYSSKLGDFVGNKKNDHWLWLVLHKKSRQVLARQVSLRDKKNSSASFCKTT
Sequences:
>Translated_70_residues MNSLCLASLALGINDPKICHYSSKLGDFVGNKKNDHWLWLVLHKKSRQVLARQVSLRDKKNSSASFCKTT >Mature_70_residues MNSLCLASLALGINDPKICHYSSKLGDFVGNKKNDHWLWLVLHKKSRQVLARQVSLRDKKNSSASFCKTT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7902; Mature: 7902
Theoretical pI: Translated: 10.56; Mature: 10.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.3 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 4.3 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNSLCLASLALGINDPKICHYSSKLGDFVGNKKNDHWLWLVLHKKSRQVLARQVSLRDKK CCCHHHHHHHCCCCCCCEEEECHHHHHHHCCCCCCCEEEEEEECCCHHHHHHHHHHCCCC NSSASFCKTT CCCCCCEECC >Mature Secondary Structure MNSLCLASLALGINDPKICHYSSKLGDFVGNKKNDHWLWLVLHKKSRQVLARQVSLRDKK CCCHHHHHHHCCCCCCCEEEECHHHHHHHCCCCCCCEEEEEEECCCHHHHHHHHHHCCCC NSSASFCKTT CCCCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA