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The map label for this gene is rpmJ

Identifier: 46447239

GI number: 46447239

Start: 1921054

End: 1921191

Strand: Direct

Name: rpmJ

Synonym: pc1605

Alternate gene names: 46447239

Gene position: 1921054-1921191 (Clockwise)

Preceding gene: 46447236

Following gene: 46447240

Centisome position: 79.56

GC content: 40.58

Gene sequence:

>138_bases
ATGAAAGTCAAAGCATCGATCAAAGCTGATCCTTCTAAAGGCGATATACTTGTTCGTCGCAGTGGTCGTTTGTATGTTAT
TAACAAAAAAGATCCTAATCGCAAACAGCGCCAGAAAGGCCCAGCCCGTAAAAAATAA

Upstream 100 bases:

>100_bases
GCCTCATTTGATTGAGAAAATTCTTGAATAAAATTGAATCTTGATTTATAAACAATGCTTACTTTATAACCTTCACTGAT
TAACTCAATAGGGAATTCTC

Downstream 100 bases:

>100_bases
GGAATAAAACATGGCGAAGAAGTCATCGGTAGAAAAGCAAAAGCGCCGCGAAAGGCTCGTCCAATTAAAATGGGATAAAA
GAAAAGAGCTCCGCGAAAAA

Product: 50S ribosomal protein L36

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 45; Mature: 45

Protein sequence:

>45_residues
MKVKASIKADPSKGDILVRRSGRLYVINKKDPNRKQRQKGPARKK

Sequences:

>Translated_45_residues
MKVKASIKADPSKGDILVRRSGRLYVINKKDPNRKQRQKGPARKK
>Mature_45_residues
MKVKASIKADPSKGDILVRRSGRLYVINKKDPNRKQRQKGPARKK

Specific function: Unknown

COG id: COG0257

COG function: function code J; Ribosomal protein L36

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L36P family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RL36_PARUW (Q6MAS0)

Other databases:

- EMBL:   BX908798
- RefSeq:   YP_008604.1
- ProteinModelPortal:   Q6MAS0
- SMR:   Q6MAS0
- GeneID:   2781451
- GenomeReviews:   BX908798_GR
- KEGG:   pcu:pc1605
- NMPDR:   fig|264201.1.peg.1605
- eggNOG:   COG0257
- HOGENOM:   HBG056259
- ProtClustDB:   PRK00831
- BioCyc:   CPRO264201:PC1605-MONOMER
- GO:   GO:0005840
- GO:   GO:0006412
- HAMAP:   MF_00251
- InterPro:   IPR000473
- TIGRFAMs:   TIGR01022

Pfam domain/function: PF00444 Ribosomal_L36; SSF57840 Ribosomal_L36

EC number: NA

Molecular weight: Translated: 5161; Mature: 5161

Theoretical pI: Translated: 12.04; Mature: 12.04

Prosite motif: PS00828 RIBOSOMAL_L36

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVKASIKADPSKGDILVRRSGRLYVINKKDPNRKQRQKGPARKK
CCCCCCCCCCCCCCCEEEECCCCEEEEECCCCCHHHHHCCCCCCC
>Mature Secondary Structure
MKVKASIKADPSKGDILVRRSGRLYVINKKDPNRKQRQKGPARKK
CCCCCCCCCCCCCCCEEEECCCCEEEEECCCCCHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA