| Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
|---|---|
| Accession | NC_005861 |
| Length | 2,414,465 |
Click here to switch to the map view.
The map label for this gene is 46447215
Identifier: 46447215
GI number: 46447215
Start: 1897953
End: 1898858
Strand: Direct
Name: 46447215
Synonym: pc1581
Alternate gene names: NA
Gene position: 1897953-1898858 (Clockwise)
Preceding gene: 46447212
Following gene: 46447217
Centisome position: 78.61
GC content: 34.77
Gene sequence:
>906_bases ATGAATAAACGCTTATTATACATTTTATTTTTCATGTGTATAAATATTTTTCTCTACGCTGAAAAAAAGGACCCTCTCAA AAAAATCTATCCTCTTAAAGCCGATCCTATCGATGTTGTGATTGTTTCTCATCCAAAAGATAGAAATACCCTGGATTATT GCATTCAAGGAATTAAAGATAATGGTGCTTTAATTAGACGTGTGATTGTGGTTTCCGAAACTAAATTAACAGACTGTGCC GAATGGTTTGACGAACATCAATTTCCCTTCAGCAAAGACACTATTACAAAAGTCATTGGGAGAGGAGACAAAAAAAAGGC AGAGACTTTTTTTAAAAAAACGGGACGAGGAGCTGGCTGGTATTTTCAACAACTTCTCAAACTTTATTCCGCTTTTGTTA TCCCCGATATTTCTTCTAATGTGTTAGTCATCGATGCCGACACCCTCTTTATGAATCCTGTAAGCTTTATTAATGAGAGG CAGGGAGGTTTATTTTGCGTCAGCCCTTTTCCAGGTAAAAAACCGTATTTCAGACATGCAGAAAAACTACTTCCCGATTA CCAAAGAATTTATCCAGAAGTTTATAGTGTTTGTCATCATATGCTATTTCAAAAACCCATTTTAAAAGAGATGTTCAAGA CAGTTGAGAATTACCATAAAAAAGCTTTTTGGATTGCTTTCTGTAACTGTGTGGATGTGGAAGCAGAAAAGAAAGGTGCT TCCGAATACGAAATTTATTATAATTATGCTTTAAGGCACACTGATCAAGTTCAAATTCGCCCTTTAATATGGGCCAATAG TGCTCATTTAGCTGATTGGGCTTATTATAAAAGAGATGGATATCACTTTGTCTCTTTTCATACTTATATGATTGGTAAAT GGCCAAGTATTTATGGAACTCAATAA
Upstream 100 bases:
>100_bases AATGTTGTTCCGTTCTAGAAATCTTATTTACGAAAAATCTTTATATTGTTAATAACTCTTCTGATTATAAAAAATTCAAG ACAAATGACGGGGAGCTTGT
Downstream 100 bases:
>100_bases TAATTGTTAGAAAATGCATTTCTCACCTTATGTTTTTGTAAACTAAGAAATGCATTGAATATTTATATGAGCTCAAAAAC AAATTTAAGGGCTACCTCTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 301; Mature: 301
Protein sequence:
>301_residues MNKRLLYILFFMCINIFLYAEKKDPLKKIYPLKADPIDVVIVSHPKDRNTLDYCIQGIKDNGALIRRVIVVSETKLTDCA EWFDEHQFPFSKDTITKVIGRGDKKKAETFFKKTGRGAGWYFQQLLKLYSAFVIPDISSNVLVIDADTLFMNPVSFINER QGGLFCVSPFPGKKPYFRHAEKLLPDYQRIYPEVYSVCHHMLFQKPILKEMFKTVENYHKKAFWIAFCNCVDVEAEKKGA SEYEIYYNYALRHTDQVQIRPLIWANSAHLADWAYYKRDGYHFVSFHTYMIGKWPSIYGTQ
Sequences:
>Translated_301_residues MNKRLLYILFFMCINIFLYAEKKDPLKKIYPLKADPIDVVIVSHPKDRNTLDYCIQGIKDNGALIRRVIVVSETKLTDCA EWFDEHQFPFSKDTITKVIGRGDKKKAETFFKKTGRGAGWYFQQLLKLYSAFVIPDISSNVLVIDADTLFMNPVSFINER QGGLFCVSPFPGKKPYFRHAEKLLPDYQRIYPEVYSVCHHMLFQKPILKEMFKTVENYHKKAFWIAFCNCVDVEAEKKGA SEYEIYYNYALRHTDQVQIRPLIWANSAHLADWAYYKRDGYHFVSFHTYMIGKWPSIYGTQ >Mature_301_residues MNKRLLYILFFMCINIFLYAEKKDPLKKIYPLKADPIDVVIVSHPKDRNTLDYCIQGIKDNGALIRRVIVVSETKLTDCA EWFDEHQFPFSKDTITKVIGRGDKKKAETFFKKTGRGAGWYFQQLLKLYSAFVIPDISSNVLVIDADTLFMNPVSFINER QGGLFCVSPFPGKKPYFRHAEKLLPDYQRIYPEVYSVCHHMLFQKPILKEMFKTVENYHKKAFWIAFCNCVDVEAEKKGA SEYEIYYNYALRHTDQVQIRPLIWANSAHLADWAYYKRDGYHFVSFHTYMIGKWPSIYGTQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35346; Mature: 35346
Theoretical pI: Translated: 9.13; Mature: 9.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKRLLYILFFMCINIFLYAEKKDPLKKIYPLKADPIDVVIVSHPKDRNTLDYCIQGIKD CCCHHHHHHHHHHHHHEEEECCCCCHHHHCCCCCCCEEEEEEECCCCCCHHHHHHHCCCC NGALIRRVIVVSETKLTDCAEWFDEHQFPFSKDTITKVIGRGDKKKAETFFKKTGRGAGW CCCEEHHHHEECCCCHHHHHHHHHHCCCCCCHHHHHHHHCCCCHHHHHHHHHHCCCCCCH YFQQLLKLYSAFVIPDISSNVLVIDADTLFMNPVSFINERQGGLFCVSPFPGKKPYFRHA HHHHHHHHHHHHCCCCCCCCEEEEECCHHHHCCHHHHHCCCCCEEEECCCCCCCCHHHHH EKLLPDYQRIYPEVYSVCHHMLFQKPILKEMFKTVENYHKKAFWIAFCNCVDVEAEKKGA HHHCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHEEEEEEECEECCCHHHCCC SEYEIYYNYALRHTDQVQIRPLIWANSAHLADWAYYKRDGYHFVSFHTYMIGKWPSIYGT CEEEEEEEEEECCCCCEEEEEEEEECCCCHHHHHHHHCCCEEEEEEEEEEEECCCCCCCC Q C >Mature Secondary Structure MNKRLLYILFFMCINIFLYAEKKDPLKKIYPLKADPIDVVIVSHPKDRNTLDYCIQGIKD CCCHHHHHHHHHHHHHEEEECCCCCHHHHCCCCCCCEEEEEEECCCCCCHHHHHHHCCCC NGALIRRVIVVSETKLTDCAEWFDEHQFPFSKDTITKVIGRGDKKKAETFFKKTGRGAGW CCCEEHHHHEECCCCHHHHHHHHHHCCCCCCHHHHHHHHCCCCHHHHHHHHHHCCCCCCH YFQQLLKLYSAFVIPDISSNVLVIDADTLFMNPVSFINERQGGLFCVSPFPGKKPYFRHA HHHHHHHHHHHHCCCCCCCCEEEEECCHHHHCCHHHHHCCCCCEEEECCCCCCCCHHHHH EKLLPDYQRIYPEVYSVCHHMLFQKPILKEMFKTVENYHKKAFWIAFCNCVDVEAEKKGA HHHCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHEEEEEEECEECCCHHHCCC SEYEIYYNYALRHTDQVQIRPLIWANSAHLADWAYYKRDGYHFVSFHTYMIGKWPSIYGT CEEEEEEEEEECCCCCEEEEEEEEECCCCHHHHHHHHCCCEEEEEEEEEEEECCCCCCCC Q C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA