| Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
|---|---|
| Accession | NC_005861 |
| Length | 2,414,465 |
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The map label for this gene is 46447211
Identifier: 46447211
GI number: 46447211
Start: 1893085
End: 1894290
Strand: Direct
Name: 46447211
Synonym: pc1577
Alternate gene names: NA
Gene position: 1893085-1894290 (Clockwise)
Preceding gene: 46447210
Following gene: 46447212
Centisome position: 78.41
GC content: 34.49
Gene sequence:
>1206_bases ATGTTTAATCATTTAAAAAACACTTTTTACCGTTTTTACGGCTTAATATTTTTGCTTTTATTGGTAGTAATAATAACTCC TTGTGTCGCTATTGACCAAAATCAAGATAATTACATCCAAGCATTGGGCTCTTTAACTTTTCATACAAAAATCCAATCTC GTTTAGATGAAACAAATTTAGAAGAAAGCGTCATCTTTGACGAACAAGAAGCTCTTAAACTGTGGGAATTAGCTTTTCAA ACGCAAGCTTCTCTCAACAATCAGGTATCCAATGCATTTATTACGCAGCTTTATCAAGCTTATTCTTTTTATGAGGAAGG TAAAAGCAATCTTCAATTGTATCAACTGAAAGAAGCAGCTTTAAACTTTAAGCAATCTTTTAACTTACTTTGTTTTTTAT GGGAAACAGCCATCGATCAGGAAGAAAAGCTTGATCTAAACAATGTAACTGCTTTAATTAGGACAAAACAAACTGTTATC AATCAAGATTTTGAGAAAAATAAAGCTATCCCGCAGAAAGTAAGAAGAGCAATTGCTCCTTATCTTATTGCTGAGAATCA CCCTATGAAAAATGCACTTGATACAATTTTTTTAAAAAAACGTGTGACTGTGGATAAAAAAACTTTTCATGCTAATGGAT TTAAAACTCTAAGAAAAGGTCCTCGTTCTTACGTTTATGTCGCAAGACACCCTAGTATAAATGGTTATTTAGTTAAAGCT TACATGGACAATGAACTGGACCAAAAACAAAACCATCCAAGCTGGTACTGGCTGACTAAACGTTGTGAAGGAGCCGAAAA AATTGCTAGAATTATAGCTAATCGAAAAATAAAACAATTTACAGTTGCTTCAAAATGGATTTATCCTCTTCCTGAAAATC CAGCGCCACCAAAAAATGCTTCTCACACCCGTCATTATGCTTTACTGCTTGTTAATGATATGGATTTAGTTCCCCATGAT GTGAATTTACAGGTTTGGCAATCGGGTATCACAAAAGAGCATTTGCATGAACTTTATGTCATTATTACCCACGCCAAAGG TTCAAGTTATCGGCCAGATAATATCGCCTATACGCATAAAGGACAATTTGCTTTCATTGATACAGAATATCCATCCAAAG GGCCTGACTATGACCGCATTAGAAAATACTTAAGTCCTGAAATGAGGGCTTATTGGGATCGTTTAGTTAAAAATGGGGGG CGTTAA
Upstream 100 bases:
>100_bases AACATTAACTGTTTTCATGTTGATGGACAAAAAAATTTTATGTTAAAGTAATATAGTTAATTTCATTTTCATTTTTTCGA AATTTCACCCCATGGTTTAT
Downstream 100 bases:
>100_bases GCTTCCTCCTTACCTAAGAAAATTGCAAGAAAGAGCTTTAATGGGACAATTATTCATCAATTCTACAGTTATGATTACTG GGGCAAGCTCTGGCTTTGGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 401; Mature: 401
Protein sequence:
>401_residues MFNHLKNTFYRFYGLIFLLLLVVIITPCVAIDQNQDNYIQALGSLTFHTKIQSRLDETNLEESVIFDEQEALKLWELAFQ TQASLNNQVSNAFITQLYQAYSFYEEGKSNLQLYQLKEAALNFKQSFNLLCFLWETAIDQEEKLDLNNVTALIRTKQTVI NQDFEKNKAIPQKVRRAIAPYLIAENHPMKNALDTIFLKKRVTVDKKTFHANGFKTLRKGPRSYVYVARHPSINGYLVKA YMDNELDQKQNHPSWYWLTKRCEGAEKIARIIANRKIKQFTVASKWIYPLPENPAPPKNASHTRHYALLLVNDMDLVPHD VNLQVWQSGITKEHLHELYVIITHAKGSSYRPDNIAYTHKGQFAFIDTEYPSKGPDYDRIRKYLSPEMRAYWDRLVKNGG R
Sequences:
>Translated_401_residues MFNHLKNTFYRFYGLIFLLLLVVIITPCVAIDQNQDNYIQALGSLTFHTKIQSRLDETNLEESVIFDEQEALKLWELAFQ TQASLNNQVSNAFITQLYQAYSFYEEGKSNLQLYQLKEAALNFKQSFNLLCFLWETAIDQEEKLDLNNVTALIRTKQTVI NQDFEKNKAIPQKVRRAIAPYLIAENHPMKNALDTIFLKKRVTVDKKTFHANGFKTLRKGPRSYVYVARHPSINGYLVKA YMDNELDQKQNHPSWYWLTKRCEGAEKIARIIANRKIKQFTVASKWIYPLPENPAPPKNASHTRHYALLLVNDMDLVPHD VNLQVWQSGITKEHLHELYVIITHAKGSSYRPDNIAYTHKGQFAFIDTEYPSKGPDYDRIRKYLSPEMRAYWDRLVKNGG R >Mature_401_residues MFNHLKNTFYRFYGLIFLLLLVVIITPCVAIDQNQDNYIQALGSLTFHTKIQSRLDETNLEESVIFDEQEALKLWELAFQ TQASLNNQVSNAFITQLYQAYSFYEEGKSNLQLYQLKEAALNFKQSFNLLCFLWETAIDQEEKLDLNNVTALIRTKQTVI NQDFEKNKAIPQKVRRAIAPYLIAENHPMKNALDTIFLKKRVTVDKKTFHANGFKTLRKGPRSYVYVARHPSINGYLVKA YMDNELDQKQNHPSWYWLTKRCEGAEKIARIIANRKIKQFTVASKWIYPLPENPAPPKNASHTRHYALLLVNDMDLVPHD VNLQVWQSGITKEHLHELYVIITHAKGSSYRPDNIAYTHKGQFAFIDTEYPSKGPDYDRIRKYLSPEMRAYWDRLVKNGG R
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46802; Mature: 46802
Theoretical pI: Translated: 9.53; Mature: 9.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFNHLKNTFYRFYGLIFLLLLVVIITPCVAIDQNQDNYIQALGSLTFHTKIQSRLDETNL CCCHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCC EESVIFDEQEALKLWELAFQTQASLNNQVSNAFITQLYQAYSFYEEGKSNLQLYQLKEAA CHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHH LNFKQSFNLLCFLWETAIDQEEKLDLNNVTALIRTKQTVINQDFEKNKAIPQKVRRAIAP HHHHHHCCCEEEEEHHHCCHHHCCCHHHHHHHHHHHHHHHCCCHHHCCCHHHHHHHHHCC YLIAENHPMKNALDTIFLKKRVTVDKKTFHANGFKTLRKGPRSYVYVARHPSINGYLVKA CEEECCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHCCCCCEEEEEECCCCCCEEEEE YMDNELDQKQNHPSWYWLTKRCEGAEKIARIIANRKIKQFTVASKWIYPLPENPAPPKNA ECCCCHHHHCCCCCEEEEEHHCCCHHHHHHHHHCCCHHEEEECCCEEECCCCCCCCCCCC SHTRHYALLLVNDMDLVPHDVNLQVWQSGITKEHLHELYVIITHAKGSSYRPDNIAYTHK CCCCEEEEEEEECCCCCCCCCCHHHHHCCCCHHHHHEEEEEEEECCCCCCCCCCCEEEEC GQFAFIDTEYPSKGPDYDRIRKYLSPEMRAYWDRLVKNGGR CCEEEEECCCCCCCCCHHHHHHHHCHHHHHHHHHHHHCCCC >Mature Secondary Structure MFNHLKNTFYRFYGLIFLLLLVVIITPCVAIDQNQDNYIQALGSLTFHTKIQSRLDETNL CCCHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCC EESVIFDEQEALKLWELAFQTQASLNNQVSNAFITQLYQAYSFYEEGKSNLQLYQLKEAA CHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHH LNFKQSFNLLCFLWETAIDQEEKLDLNNVTALIRTKQTVINQDFEKNKAIPQKVRRAIAP HHHHHHCCCEEEEEHHHCCHHHCCCHHHHHHHHHHHHHHHCCCHHHCCCHHHHHHHHHCC YLIAENHPMKNALDTIFLKKRVTVDKKTFHANGFKTLRKGPRSYVYVARHPSINGYLVKA CEEECCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHCCCCCEEEEEECCCCCCEEEEE YMDNELDQKQNHPSWYWLTKRCEGAEKIARIIANRKIKQFTVASKWIYPLPENPAPPKNA ECCCCHHHHCCCCCEEEEEHHCCCHHHHHHHHHCCCHHEEEECCCEEECCCCCCCCCCCC SHTRHYALLLVNDMDLVPHDVNLQVWQSGITKEHLHELYVIITHAKGSSYRPDNIAYTHK CCCCEEEEEEEECCCCCCCCCCHHHHHCCCCHHHHHEEEEEEEECCCCCCCCCCCEEEEC GQFAFIDTEYPSKGPDYDRIRKYLSPEMRAYWDRLVKNGGR CCEEEEECCCCCCCCCHHHHHHHHCHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA