| Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
|---|---|
| Accession | NC_005861 |
| Length | 2,414,465 |
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The map label for this gene is 46447143
Identifier: 46447143
GI number: 46447143
Start: 1800863
End: 1801159
Strand: Direct
Name: 46447143
Synonym: pc1509
Alternate gene names: NA
Gene position: 1800863-1801159 (Clockwise)
Preceding gene: 46447142
Following gene: 46447144
Centisome position: 74.59
GC content: 42.76
Gene sequence:
>297_bases TTGACACCCTTATTGGCTTTACAGTACTTAAATTTGAATTGGTGCTCTAATCTCACTGACGCTGGATTAGCGCATTTGAC TCTCTTAGTAGCTTTACAGCATTTATATCTACGTGGGTGCCCTAATCTCACGGACGCTGGATTAGCGCATTTAACATCCT TAGTGGTTCTGCAGCATTTAAACTTGAGCTATTGTATAAATCTCACGGACGCTGGGTTAGCGCATTTGTTACCATTAGTG GCCTTGCAGCATTTAGATCTGAACGGGTGCAGCAAAATATCATGGACGCTGGATTAG
Upstream 100 bases:
>100_bases AACTTACTGACGCTGGATTAGTGCACTTTGGCTCCCTCCATGACCCTGTGCATTTGGACCTAAGTGGATGCCATAAAATC ACGGAAGATGGTTAGCGCAT
Downstream 100 bases:
>100_bases CACATTTAACACCCTTTAGGCGCTTTACAGCATTTAGATCTACTTGGGGTGCCGCTATCTCACGGATGCTGGATTGGCGC ATTTTAAATTCATAGTAACT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 98; Mature: 97
Protein sequence:
>98_residues MTPLLALQYLNLNWCSNLTDAGLAHLTLLVALQHLYLRGCPNLTDAGLAHLTSLVVLQHLNLSYCINLTDAGLAHLLPLV ALQHLDLNGCSKISWTLD
Sequences:
>Translated_98_residues MTPLLALQYLNLNWCSNLTDAGLAHLTLLVALQHLYLRGCPNLTDAGLAHLTSLVVLQHLNLSYCINLTDAGLAHLLPLV ALQHLDLNGCSKISWTLD >Mature_97_residues TPLLALQYLNLNWCSNLTDAGLAHLTLLVALQHLYLRGCPNLTDAGLAHLTSLVVLQHLNLSYCINLTDAGLAHLLPLVA LQHLDLNGCSKISWTLD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Drosophila melanogaster, GI17647819, Length=100, Percent_Identity=36, Blast_Score=64, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10682; Mature: 10550
Theoretical pI: Translated: 6.49; Mature: 6.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.1 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 4.1 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPLLALQYLNLNWCSNLTDAGLAHLTLLVALQHLYLRGCPNLTDAGLAHLTSLVVLQHL CCCHHHHHHCCCHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHC NLSYCINLTDAGLAHLLPLVALQHLDLNGCSKISWTLD CHHEEEECCCCCHHHHHHHHHHHHCCCCCCCCEEEECC >Mature Secondary Structure TPLLALQYLNLNWCSNLTDAGLAHLTLLVALQHLYLRGCPNLTDAGLAHLTSLVVLQHL CCHHHHHHCCCHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHC NLSYCINLTDAGLAHLLPLVALQHLDLNGCSKISWTLD CHHEEEECCCCCHHHHHHHHHHHHCCCCCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA