| Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
|---|---|
| Accession | NC_005861 |
| Length | 2,414,465 |
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The map label for this gene is 46447144
Identifier: 46447144
GI number: 46447144
Start: 1801892
End: 1803904
Strand: Direct
Name: 46447144
Synonym: pc1510
Alternate gene names: NA
Gene position: 1801892-1803904 (Clockwise)
Preceding gene: 46447143
Following gene: 46447149
Centisome position: 74.63
GC content: 36.31
Gene sequence:
>2013_bases ATGCACATTCATAATTCAAATTTTCATCAGCCTACTCCCATCGTCAAACCAGACACTCATTCTTACTCTCGTTCAAACAA ACGTTTAAATTTTTTTGAACGAATAAATTTATTATGCAAAACAATTTTCCAGGGTTTTTCAAGTCTATTCTTTAATTATC TCAAAAAAGATTTAGCTCAATTTCAATGGAAAGGGGTTTTGTGGAGACAAAAAGAAATTGTTATTTCTAATTCTATAACT TATCTAGAAACAGAATCTGATGTATCTTTATCAAGATCAAGCTTGAGTCAAACTTCAGATTTTGTCTTCCCTTCTTCTAG ACTGAGCTTTCAGGATGGAACTTTTCTAATTATCTCTAATTTTCAAATATCTTTGTTAAGGGAAAAATCACCCTATTTTA AGAATCTTTGGTCAGGAAATTTTCAAGAAACTCTTCAAGATCCTCTCACTTTGACACAAAAAGAGTTTGCTTATCTGCTC AATTGCCTGGTGGATGCTAGTTTTAAAATTCCTGTGGAAGACATTCTTTCTTTCATTCAATTAGCCGATTATTATCAACT GACTGAAGTTGTGAAAAATTTAGAAGAACAGTTGCTTAATGGGTATAAATCAGAGAAATTTAAGTTGTTCAATTCCAATG AAGACAGCTTAGTGGAATTAAAAGAACTTTTAAATTTTGCGCAACAATATCAATTAGACACTCTAAAAAATTATTTAGAG CTTACAGTTGTGGGTTCATTATTAAATCAGACTTCTCAATTAACGGAATTTGAAAAAATCTTAAATTATTTCTCAAATGA GGTGGAAGCACTCAATTTTTCAGAAAATGCCCATTTGACTGATGCCCATCTCTTAGCGTTAAAAACTTGTAAAAATTTAA AAGTGCTTTATCTTAAAAAATGCTGCAATCTCACGGATGCTGGTTTACCGCACTTGACACCTTTAGTGGCTTTACAGTAT TTAGATTTGAGTAAGTGCCATAATCTCACGGATGCCGGATTGACGCACTTAACATTCTTAGACGCTCTAAATTATTTAGG TCTGGGTGAGTGCTATAATCTCACGGATACTGGATTAGCACATTTGAAATCTTTAATAAACTTACAACATTTAAATTTGA ATAACTGCAATTTCACGGATGCTGGATTAGCGCACTTGACACCCTTAGTCACTTTAAAGTATCTGAATCTGAGTCAGTGC TATAATCTCACGGATGCTGGATTAGCACATTTGACACCTTTAGTGAATTTACAGCAATTGAATCTGTCCGATTGCACAAA TCTCACGGATACTGGATTAGCGTATTTGTCACCCTTAGTGACTTTGCAGCATTTGAATTTAAATGTATGTAAACTTATTG ACGCTGGATTAGCACATTTGACACCTTTAGTGAATTTACAGCAATTGAATCTGTCCTATTGCACAAATCTCACGGATGCT GGATTAGCGCATTTGTCAACCTTAGTGACTCTGCAGCATTTAGATTTGGACGGATGCTATAAACTCACGGACATTGGATT AGCGCATTTAACACCTTTAGTCACTCTGAAGTATTTGAATCTGAGTTGTTGCCATAATCTCACGGGCGCTGGATTAGCGC ATTTAACACCTTTAGTGGCTTTAAAGCATTTAGATCTGAGTTGGAACGGTGATCTCGAGGACGCTGGATTAGCCCATTTG ACACCTTTAGTCGCTCTAAAATATTTAGATCTGAGTGAATGCTATCATCTCACCGACGCTGGATTAGCGCATTTAAGATC CTTAGTGGCTTTAAAGCATTTAGATTTGAGAGGATGCTATCAACTCACCGATGCTGGAATAGCACATTTAACCCCTTTAG TCGCTCTAAAGTATTTAGATCTGAAAGGATGCCCTAATCTCACCGACGCTGGATTAGCGCATTTAACATCTTTAATCGCT CTGCAGGACTTAGAACTGCCTAATTGCCAAAGGATTACGGACGCTGGATTAGCGCACTTGGCTTCCTCCATGACCCTGCG CATTTGGACCTAA
Upstream 100 bases:
>100_bases AAAATAAATTTTCTCTTTAACTTTAATTGTCTAATCAATTTTCCCTAATATGAATTGTATGATATAACTAAAAATTATTT AGCTAATTTGGAGGGTAATT
Downstream 100 bases:
>100_bases GTAGATGCCATAAAATCACGCACCATGGGTTAGCACGTTTAAGATCTACAGGGGGCTTTAAAACATTTAGTTTGTTGATT CCTGAGTGGATGCGAACTAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 670; Mature: 670
Protein sequence:
>670_residues MHIHNSNFHQPTPIVKPDTHSYSRSNKRLNFFERINLLCKTIFQGFSSLFFNYLKKDLAQFQWKGVLWRQKEIVISNSIT YLETESDVSLSRSSLSQTSDFVFPSSRLSFQDGTFLIISNFQISLLREKSPYFKNLWSGNFQETLQDPLTLTQKEFAYLL NCLVDASFKIPVEDILSFIQLADYYQLTEVVKNLEEQLLNGYKSEKFKLFNSNEDSLVELKELLNFAQQYQLDTLKNYLE LTVVGSLLNQTSQLTEFEKILNYFSNEVEALNFSENAHLTDAHLLALKTCKNLKVLYLKKCCNLTDAGLPHLTPLVALQY LDLSKCHNLTDAGLTHLTFLDALNYLGLGECYNLTDTGLAHLKSLINLQHLNLNNCNFTDAGLAHLTPLVTLKYLNLSQC YNLTDAGLAHLTPLVNLQQLNLSDCTNLTDTGLAYLSPLVTLQHLNLNVCKLIDAGLAHLTPLVNLQQLNLSYCTNLTDA GLAHLSTLVTLQHLDLDGCYKLTDIGLAHLTPLVTLKYLNLSCCHNLTGAGLAHLTPLVALKHLDLSWNGDLEDAGLAHL TPLVALKYLDLSECYHLTDAGLAHLRSLVALKHLDLRGCYQLTDAGIAHLTPLVALKYLDLKGCPNLTDAGLAHLTSLIA LQDLELPNCQRITDAGLAHLASSMTLRIWT
Sequences:
>Translated_670_residues MHIHNSNFHQPTPIVKPDTHSYSRSNKRLNFFERINLLCKTIFQGFSSLFFNYLKKDLAQFQWKGVLWRQKEIVISNSIT YLETESDVSLSRSSLSQTSDFVFPSSRLSFQDGTFLIISNFQISLLREKSPYFKNLWSGNFQETLQDPLTLTQKEFAYLL NCLVDASFKIPVEDILSFIQLADYYQLTEVVKNLEEQLLNGYKSEKFKLFNSNEDSLVELKELLNFAQQYQLDTLKNYLE LTVVGSLLNQTSQLTEFEKILNYFSNEVEALNFSENAHLTDAHLLALKTCKNLKVLYLKKCCNLTDAGLPHLTPLVALQY LDLSKCHNLTDAGLTHLTFLDALNYLGLGECYNLTDTGLAHLKSLINLQHLNLNNCNFTDAGLAHLTPLVTLKYLNLSQC YNLTDAGLAHLTPLVNLQQLNLSDCTNLTDTGLAYLSPLVTLQHLNLNVCKLIDAGLAHLTPLVNLQQLNLSYCTNLTDA GLAHLSTLVTLQHLDLDGCYKLTDIGLAHLTPLVTLKYLNLSCCHNLTGAGLAHLTPLVALKHLDLSWNGDLEDAGLAHL TPLVALKYLDLSECYHLTDAGLAHLRSLVALKHLDLRGCYQLTDAGIAHLTPLVALKYLDLKGCPNLTDAGLAHLTSLIA LQDLELPNCQRITDAGLAHLASSMTLRIWT >Mature_670_residues MHIHNSNFHQPTPIVKPDTHSYSRSNKRLNFFERINLLCKTIFQGFSSLFFNYLKKDLAQFQWKGVLWRQKEIVISNSIT YLETESDVSLSRSSLSQTSDFVFPSSRLSFQDGTFLIISNFQISLLREKSPYFKNLWSGNFQETLQDPLTLTQKEFAYLL NCLVDASFKIPVEDILSFIQLADYYQLTEVVKNLEEQLLNGYKSEKFKLFNSNEDSLVELKELLNFAQQYQLDTLKNYLE LTVVGSLLNQTSQLTEFEKILNYFSNEVEALNFSENAHLTDAHLLALKTCKNLKVLYLKKCCNLTDAGLPHLTPLVALQY LDLSKCHNLTDAGLTHLTFLDALNYLGLGECYNLTDTGLAHLKSLINLQHLNLNNCNFTDAGLAHLTPLVTLKYLNLSQC YNLTDAGLAHLTPLVNLQQLNLSDCTNLTDTGLAYLSPLVTLQHLNLNVCKLIDAGLAHLTPLVNLQQLNLSYCTNLTDA GLAHLSTLVTLQHLDLDGCYKLTDIGLAHLTPLVTLKYLNLSCCHNLTGAGLAHLTPLVALKHLDLSWNGDLEDAGLAHL TPLVALKYLDLSECYHLTDAGLAHLRSLVALKHLDLRGCYQLTDAGIAHLTPLVALKYLDLKGCPNLTDAGLAHLTSLIA LQDLELPNCQRITDAGLAHLASSMTLRIWT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI22748931, Length=304, Percent_Identity=35.5263157894737, Blast_Score=142, Evalue=7e-34, Organism=Homo sapiens, GI161333852, Length=471, Percent_Identity=26.7515923566879, Blast_Score=126, Evalue=5e-29, Organism=Homo sapiens, GI161333854, Length=460, Percent_Identity=25.2173913043478, Blast_Score=109, Evalue=7e-24, Organism=Homo sapiens, GI284447308, Length=335, Percent_Identity=31.3432835820896, Blast_Score=105, Evalue=2e-22, Organism=Homo sapiens, GI27734755, Length=291, Percent_Identity=34.3642611683849, Blast_Score=102, Evalue=9e-22, Organism=Homo sapiens, GI296531375, Length=288, Percent_Identity=34.0277777777778, Blast_Score=96, Evalue=8e-20, Organism=Homo sapiens, GI6912466, Length=307, Percent_Identity=29.3159609120521, Blast_Score=94, Evalue=4e-19, Organism=Homo sapiens, GI289666746, Length=294, Percent_Identity=33.6734693877551, Blast_Score=94, Evalue=6e-19, Organism=Homo sapiens, GI284447314, Length=282, Percent_Identity=30.8510638297872, Blast_Score=83, Evalue=8e-16, Organism=Caenorhabditis elegans, GI25151694, Length=329, Percent_Identity=29.7872340425532, Blast_Score=92, Evalue=1e-18, Organism=Caenorhabditis elegans, GI25151696, Length=329, Percent_Identity=29.7872340425532, Blast_Score=91, Evalue=2e-18, Organism=Saccharomyces cerevisiae, GI6322549, Length=395, Percent_Identity=26.3291139240506, Blast_Score=74, Evalue=7e-14, Organism=Drosophila melanogaster, GI17647819, Length=354, Percent_Identity=31.3559322033898, Blast_Score=127, Evalue=2e-29, Organism=Drosophila melanogaster, GI24662818, Length=290, Percent_Identity=34.8275862068965, Blast_Score=105, Evalue=9e-23, Organism=Drosophila melanogaster, GI21357913, Length=225, Percent_Identity=32.8888888888889, Blast_Score=90, Evalue=5e-18, Organism=Drosophila melanogaster, GI161076549, Length=310, Percent_Identity=30.3225806451613, Blast_Score=88, Evalue=2e-17, Organism=Drosophila melanogaster, GI161076547, Length=310, Percent_Identity=30.3225806451613, Blast_Score=88, Evalue=2e-17, Organism=Drosophila melanogaster, GI24652783, Length=310, Percent_Identity=30.3225806451613, Blast_Score=88, Evalue=2e-17, Organism=Drosophila melanogaster, GI161076545, Length=310, Percent_Identity=30.3225806451613, Blast_Score=88, Evalue=2e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 75007; Mature: 75007
Theoretical pI: Translated: 6.32; Mature: 6.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 0.3 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHIHNSNFHQPTPIVKPDTHSYSRSNKRLNFFERINLLCKTIFQGFSSLFFNYLKKDLAQ CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FQWKGVLWRQKEIVISNSITYLETESDVSLSRSSLSQTSDFVFPSSRLSFQDGTFLIISN HHHCCCEEECCEEEEECCEEEEECCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEC FQISLLREKSPYFKNLWSGNFQETLQDPLTLTQKEFAYLLNCLVDASFKIPVEDILSFIQ CEEEEECCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH LADYYQLTEVVKNLEEQLLNGYKSEKFKLFNSNEDSLVELKELLNFAQQYQLDTLKNYLE HHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHH LTVVGSLLNQTSQLTEFEKILNYFSNEVEALNFSENAHLTDAHLLALKTCKNLKVLYLKK HHHHHHHHHHHHHHHHHHHHHHHHCCHHEEEECCCCCCCCHHHHHHHHHHCCCHHHHHHH CCNLTDAGLPHLTPLVALQYLDLSKCHNLTDAGLTHLTFLDALNYLGLGECYNLTDTGLA HCCCCCCCCCHHHHHHHHHHHCHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHH HLKSLINLQHLNLNNCNFTDAGLAHLTPLVTLKYLNLSQCYNLTDAGLAHLTPLVNLQQL HHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHCCCCCCCHHHHHHHCCHHHC NLSDCTNLTDTGLAYLSPLVTLQHLNLNVCKLIDAGLAHLTPLVNLQQLNLSYCTNLTDA CHHHCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCHHHHCCHHHHCCCCHH GLAHLSTLVTLQHLDLDGCYKLTDIGLAHLTPLVTLKYLNLSCCHNLTGAGLAHLTPLVA HHHHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH LKHLDLSWNGDLEDAGLAHLTPLVALKYLDLSECYHLTDAGLAHLRSLVALKHLDLRGCY HHHCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH QLTDAGIAHLTPLVALKYLDLKGCPNLTDAGLAHLTSLIALQDLELPNCQRITDAGLAHL HHHHCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH ASSMTLRIWT HCCCEEEEEC >Mature Secondary Structure MHIHNSNFHQPTPIVKPDTHSYSRSNKRLNFFERINLLCKTIFQGFSSLFFNYLKKDLAQ CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FQWKGVLWRQKEIVISNSITYLETESDVSLSRSSLSQTSDFVFPSSRLSFQDGTFLIISN HHHCCCEEECCEEEEECCEEEEECCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEC FQISLLREKSPYFKNLWSGNFQETLQDPLTLTQKEFAYLLNCLVDASFKIPVEDILSFIQ CEEEEECCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH LADYYQLTEVVKNLEEQLLNGYKSEKFKLFNSNEDSLVELKELLNFAQQYQLDTLKNYLE HHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHH LTVVGSLLNQTSQLTEFEKILNYFSNEVEALNFSENAHLTDAHLLALKTCKNLKVLYLKK HHHHHHHHHHHHHHHHHHHHHHHHCCHHEEEECCCCCCCCHHHHHHHHHHCCCHHHHHHH CCNLTDAGLPHLTPLVALQYLDLSKCHNLTDAGLTHLTFLDALNYLGLGECYNLTDTGLA HCCCCCCCCCHHHHHHHHHHHCHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHH HLKSLINLQHLNLNNCNFTDAGLAHLTPLVTLKYLNLSQCYNLTDAGLAHLTPLVNLQQL HHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHCCCCCCCHHHHHHHCCHHHC NLSDCTNLTDTGLAYLSPLVTLQHLNLNVCKLIDAGLAHLTPLVNLQQLNLSYCTNLTDA CHHHCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCHHHHCCHHHHCCCCHH GLAHLSTLVTLQHLDLDGCYKLTDIGLAHLTPLVTLKYLNLSCCHNLTGAGLAHLTPLVA HHHHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH LKHLDLSWNGDLEDAGLAHLTPLVALKYLDLSECYHLTDAGLAHLRSLVALKHLDLRGCY HHHCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH QLTDAGIAHLTPLVALKYLDLKGCPNLTDAGLAHLTSLIALQDLELPNCQRITDAGLAHL HHHHCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH ASSMTLRIWT HCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA