| Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
|---|---|
| Accession | NC_005861 |
| Length | 2,414,465 |
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The map label for this gene is 46447110
Identifier: 46447110
GI number: 46447110
Start: 1751410
End: 1752378
Strand: Direct
Name: 46447110
Synonym: pc1476
Alternate gene names: NA
Gene position: 1751410-1752378 (Clockwise)
Preceding gene: 46447109
Following gene: 46447111
Centisome position: 72.54
GC content: 34.98
Gene sequence:
>969_bases ATGATAAAAAAGATTTGTAAATATGCCATCCATCTCGCATTGACAGCTCAATTGGCTTTAACATCAAGTTGCCAAATGAC AAATTGTGAGATGGATCCTATCATTGTTTACACACCGCCATCTCATCAACTTACAGATCTACCATCACCTTTTCAGCGTC TTTCTCATGAGGAAGAAAAAAGCGAATGGAGTAAGGAGCTAATCATTGGAGAGGTATTTGCCAAAGAATGGGATTTATAT CGAGCTATTACAGCCTACAAAAGAGCTTTAATTCTTATCCCAGAAGAATTAGTCGAACGAAAGTTGCAGCTTCATTATGA TCTATTACTTTGTTACTATCTAGGTCATAAATATCAAGAAGTTGTGAACATTTTTGAGTCAACCGATCTCCTTCAAGTGA ATTACTTATTTCCCGCTTTCAACAATCTTCTCCTCATTCTTTATGAAAGCTATCAGCAATTAAACCAAGAGGAAAAAGCA GAATGTATTCATAAAATGATTCAAAAATGTTCAAACGAAACAGCTAAAGATCTGACTCTATTTTCTCTTTTGAAAAAAAA ACAAATTGACGAAGCTCAATCACTCATTCATCAACATCGAGACTTTAAAAATATACAATCTAGTTTAAATACGTATTCTA CATACGCCAAATCACCCAAACGAGCCCGTTTTTTAAATGCTGTTTTACCAGGAGCTGGCTACTATTATGTAGGACAAAAA AAATCAGCTTTAACCTCTTTTATGATTAATGCATTATTTACTTACGCTGCTTATCAATTTTTTCAAAGAGGTTATCCGGC TGCGGGTATCATTACAGCTAGTATGGAGATGGGGTGGTACTATGGAGGGATCAATGGAGCTGGTCAAGAAGCTCAGGAAT TTAATAATCGTCTTTATGAAGGGGTCTGTAAAAAAATTTTGATTGACCATCGATTATTTCCAGTTCTTATGTTTCAAACG AGTTTTTAG
Upstream 100 bases:
>100_bases AATCTAAATTCAAAAGATCGTGGAATTATGAACTTGATGAAGCAATGGATTTCTTAAACCTTAAATTGACAGATCCAGAT GAAATTGGTCGTACGGTTCG
Downstream 100 bases:
>100_bases CGTGAAAAAATATTGTTTTAAATATTTTATGTATAGTTTCATTTTTATTGCCCCTTTGTTGAGCGATCCTTGGGGGAAAG ATGCGGATTTAATTTCTCCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 322; Mature: 322
Protein sequence:
>322_residues MIKKICKYAIHLALTAQLALTSSCQMTNCEMDPIIVYTPPSHQLTDLPSPFQRLSHEEEKSEWSKELIIGEVFAKEWDLY RAITAYKRALILIPEELVERKLQLHYDLLLCYYLGHKYQEVVNIFESTDLLQVNYLFPAFNNLLLILYESYQQLNQEEKA ECIHKMIQKCSNETAKDLTLFSLLKKKQIDEAQSLIHQHRDFKNIQSSLNTYSTYAKSPKRARFLNAVLPGAGYYYVGQK KSALTSFMINALFTYAAYQFFQRGYPAAGIITASMEMGWYYGGINGAGQEAQEFNNRLYEGVCKKILIDHRLFPVLMFQT SF
Sequences:
>Translated_322_residues MIKKICKYAIHLALTAQLALTSSCQMTNCEMDPIIVYTPPSHQLTDLPSPFQRLSHEEEKSEWSKELIIGEVFAKEWDLY RAITAYKRALILIPEELVERKLQLHYDLLLCYYLGHKYQEVVNIFESTDLLQVNYLFPAFNNLLLILYESYQQLNQEEKA ECIHKMIQKCSNETAKDLTLFSLLKKKQIDEAQSLIHQHRDFKNIQSSLNTYSTYAKSPKRARFLNAVLPGAGYYYVGQK KSALTSFMINALFTYAAYQFFQRGYPAAGIITASMEMGWYYGGINGAGQEAQEFNNRLYEGVCKKILIDHRLFPVLMFQT SF >Mature_322_residues MIKKICKYAIHLALTAQLALTSSCQMTNCEMDPIIVYTPPSHQLTDLPSPFQRLSHEEEKSEWSKELIIGEVFAKEWDLY RAITAYKRALILIPEELVERKLQLHYDLLLCYYLGHKYQEVVNIFESTDLLQVNYLFPAFNNLLLILYESYQQLNQEEKA ECIHKMIQKCSNETAKDLTLFSLLKKKQIDEAQSLIHQHRDFKNIQSSLNTYSTYAKSPKRARFLNAVLPGAGYYYVGQK KSALTSFMINALFTYAAYQFFQRGYPAAGIITASMEMGWYYGGINGAGQEAQEFNNRLYEGVCKKILIDHRLFPVLMFQT SF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37297; Mature: 37297
Theoretical pI: Translated: 7.80; Mature: 7.80
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIKKICKYAIHLALTAQLALTSSCQMTNCEMDPIIVYTPPSHQLTDLPSPFQRLSHEEEK CHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCCCCCCHHHHHCCHHHH SEWSKELIIGEVFAKEWDLYRAITAYKRALILIPEELVERKLQLHYDLLLCYYLGHKYQE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCHHHHHHHHHHHHHHHHHHHHHHHHHH VVNIFESTDLLQVNYLFPAFNNLLLILYESYQQLNQEEKAECIHKMIQKCSNETAKDLTL HHHHHHCCCEEEEEEHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCHHHHHHH FSLLKKKQIDEAQSLIHQHRDFKNIQSSLNTYSTYAKSPKRARFLNAVLPGAGYYYVGQK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCEEEECCH KSALTSFMINALFTYAAYQFFQRGYPAAGIITASMEMGWYYGGINGAGQEAQEFNNRLYE HHHHHHHHHHHHHHHHHHHHHHCCCCCHHEEEEEHHCCEEECCCCCCCHHHHHHHHHHHH GVCKKILIDHRLFPVLMFQTSF HHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MIKKICKYAIHLALTAQLALTSSCQMTNCEMDPIIVYTPPSHQLTDLPSPFQRLSHEEEK CHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCCCCCCHHHHHCCHHHH SEWSKELIIGEVFAKEWDLYRAITAYKRALILIPEELVERKLQLHYDLLLCYYLGHKYQE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCHHHHHHHHHHHHHHHHHHHHHHHHHH VVNIFESTDLLQVNYLFPAFNNLLLILYESYQQLNQEEKAECIHKMIQKCSNETAKDLTL HHHHHHCCCEEEEEEHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCHHHHHHH FSLLKKKQIDEAQSLIHQHRDFKNIQSSLNTYSTYAKSPKRARFLNAVLPGAGYYYVGQK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCEEEECCH KSALTSFMINALFTYAAYQFFQRGYPAAGIITASMEMGWYYGGINGAGQEAQEFNNRLYE HHHHHHHHHHHHHHHHHHHHHHCCCCCHHEEEEEHHCCEEECCCCCCCHHHHHHHHHHHH GVCKKILIDHRLFPVLMFQTSF HHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA