Definition Candidatus Protochlamydia amoebophila UWE25, complete genome.
Accession NC_005861
Length 2,414,465

Click here to switch to the map view.

The map label for this gene is 46447111

Identifier: 46447111

GI number: 46447111

Start: 1752380

End: 1752760

Strand: Direct

Name: 46447111

Synonym: pc1477

Alternate gene names: NA

Gene position: 1752380-1752760 (Clockwise)

Preceding gene: 46447110

Following gene: 46447113

Centisome position: 72.58

GC content: 39.37

Gene sequence:

>381_bases
GTGAAAAAATATTGTTTTAAATATTTTATGTATAGTTTCATTTTTATTGCCCCTTTGTTGAGCGATCCTTGGGGGAAAGA
TGCGGATTTAATTTCTCCTCATTTTGATGTTTGTCCTTCTTCCTCCCCTTCTCTTTTAGCAAAATTAGGCATGCAAGCCA
TTCGCTTTCACCAAGAAGTGATCTCACCAGCTGACGGGCCAAGAAGCCATTTTATTCCCAGTAGTTCTCAATATACATTA
AATGCAATGCGTAAATACGGTTTTTTTCGAGGTTATACGATGGGGTGTGATCGCTTAATGAGAGAAAATGACGACCCGTG
GATTTACCGAACAATTCTCGATCCCAATGGTAAAACAATCAACTGGGATCCGGTTCCCTAA

Upstream 100 bases:

>100_bases
GCTCAGGAATTTAATAATCGTCTTTATGAAGGGGTCTGTAAAAAAATTTTGATTGACCATCGATTATTTCCAGTTCTTAT
GTTTCAAACGAGTTTTTAGC

Downstream 100 bases:

>100_bases
AATTTTATAAAAATATATTTTTTTTCATGAATTGGAAAATATTGCAAAGTTCATTCAGCAAGATCTTCCCATAGGTATTT
ATGGCCTAATAGAAAAAATG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 126; Mature: 126

Protein sequence:

>126_residues
MKKYCFKYFMYSFIFIAPLLSDPWGKDADLISPHFDVCPSSSPSLLAKLGMQAIRFHQEVISPADGPRSHFIPSSSQYTL
NAMRKYGFFRGYTMGCDRLMRENDDPWIYRTILDPNGKTINWDPVP

Sequences:

>Translated_126_residues
MKKYCFKYFMYSFIFIAPLLSDPWGKDADLISPHFDVCPSSSPSLLAKLGMQAIRFHQEVISPADGPRSHFIPSSSQYTL
NAMRKYGFFRGYTMGCDRLMRENDDPWIYRTILDPNGKTINWDPVP
>Mature_126_residues
MKKYCFKYFMYSFIFIAPLLSDPWGKDADLISPHFDVCPSSSPSLLAKLGMQAIRFHQEVISPADGPRSHFIPSSSQYTL
NAMRKYGFFRGYTMGCDRLMRENDDPWIYRTILDPNGKTINWDPVP

Specific function: Unknown

COG id: COG0759

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14567; Mature: 14567

Theoretical pI: Translated: 8.46; Mature: 8.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
7.1 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
7.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKYCFKYFMYSFIFIAPLLSDPWGKDADLISPHFDVCPSSSPSLLAKLGMQAIRFHQEV
CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
ISPADGPRSHFIPSSSQYTLNAMRKYGFFRGYTMGCDRLMRENDDPWIYRTILDPNGKTI
HCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHCCCCCEEEEEEECCCCCEE
NWDPVP
CCCCCC
>Mature Secondary Structure
MKKYCFKYFMYSFIFIAPLLSDPWGKDADLISPHFDVCPSSSPSLLAKLGMQAIRFHQEV
CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
ISPADGPRSHFIPSSSQYTLNAMRKYGFFRGYTMGCDRLMRENDDPWIYRTILDPNGKTI
HCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHCCCCCEEEEEEECCCCCEE
NWDPVP
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA