| Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
|---|---|
| Accession | NC_005861 |
| Length | 2,414,465 |
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The map label for this gene is 46447052
Identifier: 46447052
GI number: 46447052
Start: 1693840
End: 1694943
Strand: Direct
Name: 46447052
Synonym: pc1418
Alternate gene names: NA
Gene position: 1693840-1694943 (Clockwise)
Preceding gene: 46447051
Following gene: 46447053
Centisome position: 70.15
GC content: 38.5
Gene sequence:
>1104_bases ATGCAATCGATGTCGATTTACTATGGCTCACAGCCTTATCCTATTCTTTCCTGCACTGGCGAATTCGATACAGAAGGAGA AATGCAGATTGATACATACCAATCAAGACAAGGCTATAGAAGAAACTTTTCTATAGATGATCTTCGTCGCGCAATTTTCC CCATTCAAAGAAGTGATGGCTCGTTTATAGGAAATTGTTTTGCCATAGCTCAAAATCTTCTATTGACATCTCACCACTGT TTAGAAGACAGAGATGAAATTAGAGGATCTTTTGGAACAGGAAGAGTTATTTTTGATGGAGTTACGTATTGTCGTCGAGA TTTTGCCGTCTTACGGGTGGAAGGAGGTCAATTCCAGCCGGTCACTTTAGATTTGGACAATGCCGTAGGGGAATCGATTC AAATGTATCACAAGTTAGAAGGCCCATCTTTAAATATCTACGTGAAGCCTTTTACTTCTCAAACTGTTATCGCCCCTGGT GGTGGATCCTTTGCTACGCGAGCAGATATCTCTTCTTCTGAAACAAGTCCTGGAGAATCTGGAGCACCTAGGATGTTGCT ACAAAATGGTTGTGTCCATGCTATGCATCAGGGAAATAGTGAAGGACTAACAATGAATGCGTTTCAAGAAATACTTGAGC AAGCATACCGAGCTGGTAACCGCAATGCTTATGACATTCTTTCAAAAGTCAAGTGGGAAAATTTCGAAACAAGACTTATA AATCGGTCGCCTCTAATAATAAAGGTTGGAGATGTAGAGGAAGAGAAGAATTCTAAGCCTAAGCCAAGGATAAACGAAAG TGTAAAGCTTTGTGATCCAAATAATCCAAGAATAGTAGCTACGTTTAATTATACAGAAATTGGTGAAGGTAGAGGCAATA GAGCGATCAGAATTTCTAAGGATGGTGTTGCTGGTTCTCAAATTACTTATGCGATTGATCCTAATCCTCATGATGATAAT CACTACAATAACAAAGGTCAGAAAGAATTTTATAAAACACTGGCAAGGGAAATAGGAAAATTTTATCTATTAAATGGGAC TTATTCTGCTGGAGGAACTATGTCAGTATATAACAAAATTTATACCCTCACTAAAGTCAATTAA
Upstream 100 bases:
>100_bases TCAAATTTTAACTTTAAAATATATTTAATGATTAAAAGATAAAAATAGTCAGACGTTGACTGTTATAACCTAAAATTAAA AAGTTTTATCCGAGGAAAAT
Downstream 100 bases:
>100_bases TTTTAACCTAGCTTGCCTCTTGTATAATTAGGCATTTAGGTCCCTTATTTATGTTCTAAATAAGGGATCTTGCATATTTA TTTTTTATCTCAATTATCCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 367; Mature: 367
Protein sequence:
>367_residues MQSMSIYYGSQPYPILSCTGEFDTEGEMQIDTYQSRQGYRRNFSIDDLRRAIFPIQRSDGSFIGNCFAIAQNLLLTSHHC LEDRDEIRGSFGTGRVIFDGVTYCRRDFAVLRVEGGQFQPVTLDLDNAVGESIQMYHKLEGPSLNIYVKPFTSQTVIAPG GGSFATRADISSSETSPGESGAPRMLLQNGCVHAMHQGNSEGLTMNAFQEILEQAYRAGNRNAYDILSKVKWENFETRLI NRSPLIIKVGDVEEEKNSKPKPRINESVKLCDPNNPRIVATFNYTEIGEGRGNRAIRISKDGVAGSQITYAIDPNPHDDN HYNNKGQKEFYKTLAREIGKFYLLNGTYSAGGTMSVYNKIYTLTKVN
Sequences:
>Translated_367_residues MQSMSIYYGSQPYPILSCTGEFDTEGEMQIDTYQSRQGYRRNFSIDDLRRAIFPIQRSDGSFIGNCFAIAQNLLLTSHHC LEDRDEIRGSFGTGRVIFDGVTYCRRDFAVLRVEGGQFQPVTLDLDNAVGESIQMYHKLEGPSLNIYVKPFTSQTVIAPG GGSFATRADISSSETSPGESGAPRMLLQNGCVHAMHQGNSEGLTMNAFQEILEQAYRAGNRNAYDILSKVKWENFETRLI NRSPLIIKVGDVEEEKNSKPKPRINESVKLCDPNNPRIVATFNYTEIGEGRGNRAIRISKDGVAGSQITYAIDPNPHDDN HYNNKGQKEFYKTLAREIGKFYLLNGTYSAGGTMSVYNKIYTLTKVN >Mature_367_residues MQSMSIYYGSQPYPILSCTGEFDTEGEMQIDTYQSRQGYRRNFSIDDLRRAIFPIQRSDGSFIGNCFAIAQNLLLTSHHC LEDRDEIRGSFGTGRVIFDGVTYCRRDFAVLRVEGGQFQPVTLDLDNAVGESIQMYHKLEGPSLNIYVKPFTSQTVIAPG GGSFATRADISSSETSPGESGAPRMLLQNGCVHAMHQGNSEGLTMNAFQEILEQAYRAGNRNAYDILSKVKWENFETRLI NRSPLIIKVGDVEEEKNSKPKPRINESVKLCDPNNPRIVATFNYTEIGEGRGNRAIRISKDGVAGSQITYAIDPNPHDDN HYNNKGQKEFYKTLAREIGKFYLLNGTYSAGGTMSVYNKIYTLTKVN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41045; Mature: 41045
Theoretical pI: Translated: 6.86; Mature: 6.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQSMSIYYGSQPYPILSCTGEFDTEGEMQIDTYQSRQGYRRNFSIDDLRRAIFPIQRSDG CCCEEEEECCCCCEEEEECCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHCCEECCCC SFIGNCFAIAQNLLLTSHHCLEDRDEIRGSFGTGRVIFDGVTYCRRDFAVLRVEGGQFQP CCHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCEEEECCHHHHCCCEEEEEECCCCEEE VTLDLDNAVGESIQMYHKLEGPSLNIYVKPFTSQTVIAPGGGSFATRADISSSETSPGES EEEECCHHHHHHHHHHHHCCCCEEEEEEEECCCCEEEECCCCCCEEECCCCCCCCCCCCC GAPRMLLQNGCVHAMHQGNSEGLTMNAFQEILEQAYRAGNRNAYDILSKVKWENFETRLI CCCHHHHHCCCEEEHHCCCCCCEEHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCEEEEE NRSPLIIKVGDVEEEKNSKPKPRINESVKLCDPNNPRIVATFNYTEIGEGRGNRAIRISK CCCCEEEEECCCCHHHCCCCCCCCCCCEEEECCCCCEEEEEECCEECCCCCCCCEEEEEC DGVAGSQITYAIDPNPHDDNHYNNKGQKEFYKTLAREIGKFYLLNGTYSAGGTMSVYNKI CCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHE YTLTKVN EEEEECC >Mature Secondary Structure MQSMSIYYGSQPYPILSCTGEFDTEGEMQIDTYQSRQGYRRNFSIDDLRRAIFPIQRSDG CCCEEEEECCCCCEEEEECCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHCCEECCCC SFIGNCFAIAQNLLLTSHHCLEDRDEIRGSFGTGRVIFDGVTYCRRDFAVLRVEGGQFQP CCHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCEEEECCHHHHCCCEEEEEECCCCEEE VTLDLDNAVGESIQMYHKLEGPSLNIYVKPFTSQTVIAPGGGSFATRADISSSETSPGES EEEECCHHHHHHHHHHHHCCCCEEEEEEEECCCCEEEECCCCCCEEECCCCCCCCCCCCC GAPRMLLQNGCVHAMHQGNSEGLTMNAFQEILEQAYRAGNRNAYDILSKVKWENFETRLI CCCHHHHHCCCEEEHHCCCCCCEEHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCEEEEE NRSPLIIKVGDVEEEKNSKPKPRINESVKLCDPNNPRIVATFNYTEIGEGRGNRAIRISK CCCCEEEEECCCCHHHCCCCCCCCCCCEEEECCCCCEEEEEECCEECCCCCCCCEEEEEC DGVAGSQITYAIDPNPHDDNHYNNKGQKEFYKTLAREIGKFYLLNGTYSAGGTMSVYNKI CCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHE YTLTKVN EEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA