Definition Candidatus Protochlamydia amoebophila UWE25, complete genome.
Accession NC_005861
Length 2,414,465

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The map label for this gene is 46447051

Identifier: 46447051

GI number: 46447051

Start: 1691799

End: 1693271

Strand: Direct

Name: 46447051

Synonym: pc1417

Alternate gene names: NA

Gene position: 1691799-1693271 (Clockwise)

Preceding gene: 46447050

Following gene: 46447052

Centisome position: 70.07

GC content: 31.36

Gene sequence:

>1473_bases
ATGACTTCTATTCAACTGCATCAACTTCAACAACATTTTAGCATGCTCTTAGATCAAGTCGAGAATACATCTAATGAAGA
TCTCAGTAAACGATTAAAACTAATTTGGGATAAAAGGGGTTGCATAGATGAAAAAAATGTCATGCAATTAATACGAATTG
TAAAAAAATATGATACAACCTCTGGAAATTCAATTAAACAAATAATAGAAAAAATCAGAAAAAAAATATTTGATTTATCA
ATTGGTGATGGAAAATGGTTTATCTACTCATTCGCGCGCGCTGGGGAGTTTGAAAAAGTTCGCGCTCTTATCAACATAGT
CTCTACTGATGATGAGCTAAAAACTCTACTTACTAAACCTCAGATTCAATTCAATCAAAACGTTGTTGAATGTGCTATAC
AAGGAAGAAATCAAGCCCTTATTGCTTATTTGAATTTGCCTTATCCTTTACTCACAAAAGAAATTATTTGTAAAAAAGGT
GAAGACCCTAAACTTGAAGGGTTACTTTCGGGTATGTATACGTTAAATTTGAAAATAAACTATTGTATTGTTTATGAAGA
TGTTAAATATCACAGTACAAATTGTTTTACTATAATAAATTCTTCCTTTCAAAAAAGACCTCTTATTTTTGCTTTTATAG
AAAAAGAAAATAAACTTTATCCTCGTTTATTTTGGCTCAGCAAATCACAGGCTACTTGGAGAAGACTTGATAAAACCTTT
AAAGATCATATTGGAAAAACAAGATCGGGTGAAGAAAGGTTGTTGATTCCTATTAGAATTAACCTACGCTTCTTTGAAAT
CTTAAATGAACAGGATGATATTCAGCCTTTGGACGGAAGCCTGGGAAACGATTTTCTTCAGTATGTTGTAGCTAAAAGTG
ATAAGGCTGTTAAAAAGACACCTAGAACAAAAGATAAAAAGTATCACATTGTACAAGATGAGCAAACACTTGTACAGGAT
GAAGACAGTTCGGTACAGGATGAAAGTGGACCATTTTCACTAAAACCAAGGGAAACACCAGAAAATTTTTTTATAAATGG
AATACCTGCAATTTCTTCTAAAAATGATTTTGAAGATAATGCAGTTAAGCCCAATTTCACTAAAGTTGAAAGATCGCAAG
TTATAACAAGTGCTTTTTACGGTCGATTAAGAGCTAATGTTTTTTTGTCAAATGATGAAAACATTAGATTTTTATTTCTA
CAAAATGATTTAGGACATGTATTTTTAGCAGGAGCTGAATTAATAAATAGTCCGATTACAAGACGAGGGATTAGAAAAAA
ATGGGTAAAGCTAGGTTCTTTATCTCTTCCACTTAAAGAATATCAAAAACAATTTATTAATGAATTTATAAGTGATTCAG
AAAAGGAAGAAATTCGACAAGGAGAACAGTTGACTTATGTTCAAACGTGGAATTACTTGAGAGAGATGCCTTGCATTCAA
AATTATTATGCCATTCCTCGACAAATACAGTAA

Upstream 100 bases:

>100_bases
TGTTATTTTGTAACATTCTATTTACATGTTTAGAATTGCCAAATAAATGATCTTTAAGTTGATAAGTAAACAATAACAAT
AAAACAATTTGAGGAAAATT

Downstream 100 bases:

>100_bases
ACGTTCTTCTTTGCATATCTAAACTCAAGCTGTTTGTATAAATTAGCCACCGTAATTTTTTTTAATTGCGGTTGGCTTTC
TCTTCCAAGTAAAAAAGCTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 490; Mature: 489

Protein sequence:

>490_residues
MTSIQLHQLQQHFSMLLDQVENTSNEDLSKRLKLIWDKRGCIDEKNVMQLIRIVKKYDTTSGNSIKQIIEKIRKKIFDLS
IGDGKWFIYSFARAGEFEKVRALINIVSTDDELKTLLTKPQIQFNQNVVECAIQGRNQALIAYLNLPYPLLTKEIICKKG
EDPKLEGLLSGMYTLNLKINYCIVYEDVKYHSTNCFTIINSSFQKRPLIFAFIEKENKLYPRLFWLSKSQATWRRLDKTF
KDHIGKTRSGEERLLIPIRINLRFFEILNEQDDIQPLDGSLGNDFLQYVVAKSDKAVKKTPRTKDKKYHIVQDEQTLVQD
EDSSVQDESGPFSLKPRETPENFFINGIPAISSKNDFEDNAVKPNFTKVERSQVITSAFYGRLRANVFLSNDENIRFLFL
QNDLGHVFLAGAELINSPITRRGIRKKWVKLGSLSLPLKEYQKQFINEFISDSEKEEIRQGEQLTYVQTWNYLREMPCIQ
NYYAIPRQIQ

Sequences:

>Translated_490_residues
MTSIQLHQLQQHFSMLLDQVENTSNEDLSKRLKLIWDKRGCIDEKNVMQLIRIVKKYDTTSGNSIKQIIEKIRKKIFDLS
IGDGKWFIYSFARAGEFEKVRALINIVSTDDELKTLLTKPQIQFNQNVVECAIQGRNQALIAYLNLPYPLLTKEIICKKG
EDPKLEGLLSGMYTLNLKINYCIVYEDVKYHSTNCFTIINSSFQKRPLIFAFIEKENKLYPRLFWLSKSQATWRRLDKTF
KDHIGKTRSGEERLLIPIRINLRFFEILNEQDDIQPLDGSLGNDFLQYVVAKSDKAVKKTPRTKDKKYHIVQDEQTLVQD
EDSSVQDESGPFSLKPRETPENFFINGIPAISSKNDFEDNAVKPNFTKVERSQVITSAFYGRLRANVFLSNDENIRFLFL
QNDLGHVFLAGAELINSPITRRGIRKKWVKLGSLSLPLKEYQKQFINEFISDSEKEEIRQGEQLTYVQTWNYLREMPCIQ
NYYAIPRQIQ
>Mature_489_residues
TSIQLHQLQQHFSMLLDQVENTSNEDLSKRLKLIWDKRGCIDEKNVMQLIRIVKKYDTTSGNSIKQIIEKIRKKIFDLSI
GDGKWFIYSFARAGEFEKVRALINIVSTDDELKTLLTKPQIQFNQNVVECAIQGRNQALIAYLNLPYPLLTKEIICKKGE
DPKLEGLLSGMYTLNLKINYCIVYEDVKYHSTNCFTIINSSFQKRPLIFAFIEKENKLYPRLFWLSKSQATWRRLDKTFK
DHIGKTRSGEERLLIPIRINLRFFEILNEQDDIQPLDGSLGNDFLQYVVAKSDKAVKKTPRTKDKKYHIVQDEQTLVQDE
DSSVQDESGPFSLKPRETPENFFINGIPAISSKNDFEDNAVKPNFTKVERSQVITSAFYGRLRANVFLSNDENIRFLFLQ
NDLGHVFLAGAELINSPITRRGIRKKWVKLGSLSLPLKEYQKQFINEFISDSEKEEIRQGEQLTYVQTWNYLREMPCIQN
YYAIPRQIQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 57156; Mature: 57025

Theoretical pI: Translated: 9.22; Mature: 9.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSIQLHQLQQHFSMLLDQVENTSNEDLSKRLKLIWDKRGCIDEKNVMQLIRIVKKYDTT
CCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCC
SGNSIKQIIEKIRKKIFDLSIGDGKWFIYSFARAGEFEKVRALINIVSTDDELKTLLTKP
CCHHHHHHHHHHHHHHHCCCCCCCCEEEEEEHHCCCHHHHHHHHHHHCCCHHHHHHHCCC
QIQFNQNVVECAIQGRNQALIAYLNLPYPLLTKEIICKKGEDPKLEGLLSGMYTLNLKIN
CHHHCCCCEEHHHCCCCEEEEEEEECCCHHHHHHHHHCCCCCCHHHHHHCCEEEEEEEEE
YCIVYEDVKYHSTNCFTIINSSFQKRPLIFAFIEKENKLYPRLFWLSKSQATWRRLDKTF
EEEEEECCEECCCCEEEEECCCCCCCCEEEEEEECCCCCCCEEEEECCCHHHHHHHHHHH
KDHIGKTRSGEERLLIPIRINLRFFEILNEQDDIQPLDGSLGNDFLQYVVAKSDKAVKKT
HHHCCCCCCCCCEEEEEEEECEEEEEHHCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHCC
PRTKDKKYHIVQDEQTLVQDEDSSVQDESGPFSLKPRETPENFFINGIPAISSKNDFEDN
CCCCCCCEEEECCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCC
AVKPNFTKVERSQVITSAFYGRLRANVFLSNDENIRFLFLQNDLGHVFLAGAELINSPIT
CCCCCHHHHHHHHHHHHHHHHHHEEEEEEECCCCEEEEEEECCCCCEEEECHHHHCCCHH
RRGIRKKWVKLGSLSLPLKEYQKQFINEFISDSEKEEIRQGEQLTYVQTWNYLREMPCIQ
HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCHHHHHCCCCEEEHHHHHHHHHCCHHH
NYYAIPRQIQ
HHHCCCCCCC
>Mature Secondary Structure 
TSIQLHQLQQHFSMLLDQVENTSNEDLSKRLKLIWDKRGCIDEKNVMQLIRIVKKYDTT
CCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCC
SGNSIKQIIEKIRKKIFDLSIGDGKWFIYSFARAGEFEKVRALINIVSTDDELKTLLTKP
CCHHHHHHHHHHHHHHHCCCCCCCCEEEEEEHHCCCHHHHHHHHHHHCCCHHHHHHHCCC
QIQFNQNVVECAIQGRNQALIAYLNLPYPLLTKEIICKKGEDPKLEGLLSGMYTLNLKIN
CHHHCCCCEEHHHCCCCEEEEEEEECCCHHHHHHHHHCCCCCCHHHHHHCCEEEEEEEEE
YCIVYEDVKYHSTNCFTIINSSFQKRPLIFAFIEKENKLYPRLFWLSKSQATWRRLDKTF
EEEEEECCEECCCCEEEEECCCCCCCCEEEEEEECCCCCCCEEEEECCCHHHHHHHHHHH
KDHIGKTRSGEERLLIPIRINLRFFEILNEQDDIQPLDGSLGNDFLQYVVAKSDKAVKKT
HHHCCCCCCCCCEEEEEEEECEEEEEHHCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHCC
PRTKDKKYHIVQDEQTLVQDEDSSVQDESGPFSLKPRETPENFFINGIPAISSKNDFEDN
CCCCCCCEEEECCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCC
AVKPNFTKVERSQVITSAFYGRLRANVFLSNDENIRFLFLQNDLGHVFLAGAELINSPIT
CCCCCHHHHHHHHHHHHHHHHHHEEEEEEECCCCEEEEEEECCCCCEEEECHHHHCCCHH
RRGIRKKWVKLGSLSLPLKEYQKQFINEFISDSEKEEIRQGEQLTYVQTWNYLREMPCIQ
HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCHHHHHCCCCEEEHHHHHHHHHCCHHH
NYYAIPRQIQ
HHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA