| Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
|---|---|
| Accession | NC_005861 |
| Length | 2,414,465 |
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The map label for this gene is 46447033
Identifier: 46447033
GI number: 46447033
Start: 1675345
End: 1676337
Strand: Direct
Name: 46447033
Synonym: pc1399
Alternate gene names: NA
Gene position: 1675345-1676337 (Clockwise)
Preceding gene: 46447032
Following gene: 46447034
Centisome position: 69.39
GC content: 38.77
Gene sequence:
>993_bases ATGCCATCATCTGATGAAATCAACCCAGTTAGATTTAATCCAAGGTCTGATTCTTCAAGCCTTGGTCGAAGTCGCCCTGA AGGCACTCCACGCAGTGATAAAAATTTTAAAAAACTTGTTCGTAATGATGAAGATCCCTCAAAAGAACAAGAAGAATTAG CCGGACTGGAAGAAGAAAATGAAGCGGCTCCCCTCTCTCTTTTTGATCTGTCAGCAAAAAATAAATCAACCCGCAAATCC CCTAGTATGGTTGCAAAAAATCCTTTTATAAAAGAAGAAAACGACCAACAGCCAATTTTGGAAATGGCTGAAAATAAGAA TCCTCAACTTGAGCAAAACTCCACTGAAAAACCCTTGAAAGATACTTTTCTTCACGGAGAAATTGTTCGTGAATCTGTCA TTGAAGGAAAAAAAGAAAAAAACAGCTCCCTTGCTTTAGCAACTGACAGCGCTGCTCCCTCTCCTAAAAAAGAAAAACAG AAACTTAGCCGAACTCCATTCGAAGCACGAGAAGAACAGGTAGATTTATCAGCCATTAATTCACAACAGCGTCCGATCGC CTTTTTAGCAGATAAAGCGGAATTGGCTGAAGAACCAAAAACTTTATCGTCAATTAAAGATATCGTCGCCCAAATTGTAG AAAAAATGCAGATTATTAAAACAGGTGAAAAGACAGATACAGTTGTCACACTTCGATATCCCCCTATTTTTGAAGGAGCA ACAGTCACTTTAACAAATTTTGAAGGAGCGGCGCGAGAATTCAATGTCGCTTTTGCCAACTTAACTGATGAAGCGAAGCG ATTTTTAGATCGTAAAATTGTTGAAGATTCTTTAGTAGAAAACCTTGCGCGACAAGATATTATTGTTAACGTTTTAACCA CAACGACCCTTCCTGAAGCGAATGCTGATACGGACTCTTATAAATATTTCACTAGGGAAGAGCGAGAACAAAAACGAGAT CAACAAGCCCAAGACCAAAAAGAAGAAGAGTAA
Upstream 100 bases:
>100_bases TTTGTCTCTAATCAAAGACGCAATTCTTAAGTTCTCTGAGGAAAGCAACAAAAAAGTGAAAGCGCAGTTAGCAGCTTATT TAACGGAAAAGGAGTGTAAT
Downstream 100 bases:
>100_bases ACTTAATTGTTAAAAAATTTTTATTTTTTTTTTCATAGATAGCCAATGCATTTATTGGCTATCTTTTTTTATTAAACAAC CCTCATCCGACATTTCTACG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 330; Mature: 329
Protein sequence:
>330_residues MPSSDEINPVRFNPRSDSSSLGRSRPEGTPRSDKNFKKLVRNDEDPSKEQEELAGLEEENEAAPLSLFDLSAKNKSTRKS PSMVAKNPFIKEENDQQPILEMAENKNPQLEQNSTEKPLKDTFLHGEIVRESVIEGKKEKNSSLALATDSAAPSPKKEKQ KLSRTPFEAREEQVDLSAINSQQRPIAFLADKAELAEEPKTLSSIKDIVAQIVEKMQIIKTGEKTDTVVTLRYPPIFEGA TVTLTNFEGAAREFNVAFANLTDEAKRFLDRKIVEDSLVENLARQDIIVNVLTTTTLPEANADTDSYKYFTREEREQKRD QQAQDQKEEE
Sequences:
>Translated_330_residues MPSSDEINPVRFNPRSDSSSLGRSRPEGTPRSDKNFKKLVRNDEDPSKEQEELAGLEEENEAAPLSLFDLSAKNKSTRKS PSMVAKNPFIKEENDQQPILEMAENKNPQLEQNSTEKPLKDTFLHGEIVRESVIEGKKEKNSSLALATDSAAPSPKKEKQ KLSRTPFEAREEQVDLSAINSQQRPIAFLADKAELAEEPKTLSSIKDIVAQIVEKMQIIKTGEKTDTVVTLRYPPIFEGA TVTLTNFEGAAREFNVAFANLTDEAKRFLDRKIVEDSLVENLARQDIIVNVLTTTTLPEANADTDSYKYFTREEREQKRD QQAQDQKEEE >Mature_329_residues PSSDEINPVRFNPRSDSSSLGRSRPEGTPRSDKNFKKLVRNDEDPSKEQEELAGLEEENEAAPLSLFDLSAKNKSTRKSP SMVAKNPFIKEENDQQPILEMAENKNPQLEQNSTEKPLKDTFLHGEIVRESVIEGKKEKNSSLALATDSAAPSPKKEKQK LSRTPFEAREEQVDLSAINSQQRPIAFLADKAELAEEPKTLSSIKDIVAQIVEKMQIIKTGEKTDTVVTLRYPPIFEGAT VTLTNFEGAAREFNVAFANLTDEAKRFLDRKIVEDSLVENLARQDIIVNVLTTTTLPEANADTDSYKYFTREEREQKRDQ QAQDQKEEE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37213; Mature: 37082
Theoretical pI: Translated: 4.63; Mature: 4.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSSDEINPVRFNPRSDSSSLGRSRPEGTPRSDKNFKKLVRNDEDPSKEQEELAGLEEEN CCCCCCCCCEEECCCCCCHHHCCCCCCCCCCCCHHHHHHHCCCCCCCHHHHHHCCCCCCC EAAPLSLFDLSAKNKSTRKSPSMVAKNPFIKEENDQQPILEMAENKNPQLEQNSTEKPLK CCCCEEEEECCCCCCCCCCCCCHHHCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCHH DTFLHGEIVRESVIEGKKEKNSSLALATDSAAPSPKKEKQKLSRTPFEAREEQVDLSAIN HHHHHHHHHHHHHHCCHHHCCCCEEEEECCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHC SQQRPIAFLADKAELAEEPKTLSSIKDIVAQIVEKMQIIKTGEKTDTVVTLRYPPIFEGA CCCCCCEEECCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCC TVTLTNFEGAAREFNVAFANLTDEAKRFLDRKIVEDSLVENLARQDIIVNVLTTTTLPEA EEEEECCCCCCHHHHHHEECHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEHHHHCCCCCC NADTDSYKYFTREEREQKRDQQAQDQKEEE CCCCCHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure PSSDEINPVRFNPRSDSSSLGRSRPEGTPRSDKNFKKLVRNDEDPSKEQEELAGLEEEN CCCCCCCCEEECCCCCCHHHCCCCCCCCCCCCHHHHHHHCCCCCCCHHHHHHCCCCCCC EAAPLSLFDLSAKNKSTRKSPSMVAKNPFIKEENDQQPILEMAENKNPQLEQNSTEKPLK CCCCEEEEECCCCCCCCCCCCCHHHCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCHH DTFLHGEIVRESVIEGKKEKNSSLALATDSAAPSPKKEKQKLSRTPFEAREEQVDLSAIN HHHHHHHHHHHHHHCCHHHCCCCEEEEECCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHC SQQRPIAFLADKAELAEEPKTLSSIKDIVAQIVEKMQIIKTGEKTDTVVTLRYPPIFEGA CCCCCCEEECCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCC TVTLTNFEGAAREFNVAFANLTDEAKRFLDRKIVEDSLVENLARQDIIVNVLTTTTLPEA EEEEECCCCCCHHHHHHEECHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEHHHHCCCCCC NADTDSYKYFTREEREQKRDQQAQDQKEEE CCCCCHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA