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The map label for this gene is sctQ [C]

Identifier: 46447034

GI number: 46447034

Start: 1676642

End: 1677979

Strand: Direct

Name: sctQ [C]

Synonym: pc1400

Alternate gene names: 46447034

Gene position: 1676642-1677979 (Clockwise)

Preceding gene: 46447033

Following gene: 46447035

Centisome position: 69.44

GC content: 37.44

Gene sequence:

>1338_bases
ATGGCAACTCCTTCAGCTTCCTATGATTGGATTCGTACAATTGATCCAGAATTAAAAAATTTAGATGAAATTCCCCTAAC
AGGGTCTGCTCCTCCTTTTCCCTGGGAAGAGCTTTCTCAACGCATTGCAAAATCTTTCGATCGAGAAGGATTGTTTATTC
AACCCAAAGAATTGGTTTGGCGTTCTCAAGAAAATTTATATGAAGGGCTAGGGGATTCCCCATTTCCTTTACATTTTGCA
ATTCCAACTTTACAAGGACAGGCTTGTTGGATAATGCCGGAACAGGAAATGGCTATTTTAGAGACATGGCTTTTAACTAA
AGAGTCTCACCCTATTAGTTTTCAAGATCGAGCATTAAGTGAAAGCTTTTATCGATTTTTTGCTCTGGAAGTTCTTTACC
ACACTAATCAGCTTAACTTCGATAAATCAATTACTCCTATTCTCACTAATCAAACTTCTTTACCTAATGAAAGCGCTTTA
TGTCTAGATATCTGTTTGCAATTTCAAGAACAAATAGTCTGGGGTCGATTAATTATTTCAAAAGATTTGAGACGTTCCTG
GGTCGAGCATTTTGCTTCCCGAGGCCCTTCTCATTTGACGACCGAACTTGCCAAAGCTATTGATATTCAAGTACATTTAG
AAGTTGGAAAGACGACACTTTCATTAAAAGAGTGGTCTTCAGTTTGTTTAGGTGATTTTATTGTTTTGGATAGCTGCTCA
TTAGACCCTCAAGAATTGACAGGCCGTCTTATGCTAACGGTTAACGGAAAGCCTGCCCATCGAGGAAAAATCAAAGATGG
TGTTATCAAAATTTTAGAAACCCCTCTCATCCAAGAAGTTGAAACACCTTTACAAGAATTAAATATGCCACAAGAGGAAC
TCCCTATGGTAAAACAATCAGAAGAAGATGATGATGATTTAAGTGACTTAAATTTTACTGAAGACGAAGATGAAGACGAA
GATTTTGATTTTGAAGACGATGAGGAAGAGACTGAAGATGATGATGAAAATTTTACTTTAGACGAAGTAACAGAAGAAGA
ACAATCTTCTCCCAAAAACAATGCATCTCAAAGTAGTCCAGCTTCTTCTATTACAGAAAACACAAAAACAGGTCTCATTA
CCCCTAACCAAATTCCTGTCAATCTGACTGTAGAAGTCGGCCGTATCCAAATGTCTATGGATCATTTACTCAAACTTGAA
CCCGGTAATATGCTTGAATTAAACATTAAACCGGAAGATGGAGTCGATTTAACGATTAATGGAAAAATTGTCGGACGAGG
AGAGCTACTTCGTATTGGGGAAGTTTTAGGTGTGAGAGTTTTAGAATTAGGTCATTGA

Upstream 100 bases:

>100_bases
CTCCAAATTTTGAGAAAAATATGAGAAAATAGTATTTAAAAAAATTAATTTTAACGCCTACTATAAATTGCATAGGGAAT
ACAAACTCAGGTTAGACAAA

Downstream 100 bases:

>100_bases
TTACCGATTATTTTTTAATGAATAAATGACATAGCTTTTACTCAGAATTGATTTTTGATATTTTAGGTTAATACAGTGGA
ATTAGATCCTAGCAAACGAA

Product: type III secretion system protein

Products: NA

Alternate protein names: Type III Secretion Translocase SctQ

Number of amino acids: Translated: 445; Mature: 444

Protein sequence:

>445_residues
MATPSASYDWIRTIDPELKNLDEIPLTGSAPPFPWEELSQRIAKSFDREGLFIQPKELVWRSQENLYEGLGDSPFPLHFA
IPTLQGQACWIMPEQEMAILETWLLTKESHPISFQDRALSESFYRFFALEVLYHTNQLNFDKSITPILTNQTSLPNESAL
CLDICLQFQEQIVWGRLIISKDLRRSWVEHFASRGPSHLTTELAKAIDIQVHLEVGKTTLSLKEWSSVCLGDFIVLDSCS
LDPQELTGRLMLTVNGKPAHRGKIKDGVIKILETPLIQEVETPLQELNMPQEELPMVKQSEEDDDDLSDLNFTEDEDEDE
DFDFEDDEEETEDDDENFTLDEVTEEEQSSPKNNASQSSPASSITENTKTGLITPNQIPVNLTVEVGRIQMSMDHLLKLE
PGNMLELNIKPEDGVDLTINGKIVGRGELLRIGEVLGVRVLELGH

Sequences:

>Translated_445_residues
MATPSASYDWIRTIDPELKNLDEIPLTGSAPPFPWEELSQRIAKSFDREGLFIQPKELVWRSQENLYEGLGDSPFPLHFA
IPTLQGQACWIMPEQEMAILETWLLTKESHPISFQDRALSESFYRFFALEVLYHTNQLNFDKSITPILTNQTSLPNESAL
CLDICLQFQEQIVWGRLIISKDLRRSWVEHFASRGPSHLTTELAKAIDIQVHLEVGKTTLSLKEWSSVCLGDFIVLDSCS
LDPQELTGRLMLTVNGKPAHRGKIKDGVIKILETPLIQEVETPLQELNMPQEELPMVKQSEEDDDDLSDLNFTEDEDEDE
DFDFEDDEEETEDDDENFTLDEVTEEEQSSPKNNASQSSPASSITENTKTGLITPNQIPVNLTVEVGRIQMSMDHLLKLE
PGNMLELNIKPEDGVDLTINGKIVGRGELLRIGEVLGVRVLELGH
>Mature_444_residues
ATPSASYDWIRTIDPELKNLDEIPLTGSAPPFPWEELSQRIAKSFDREGLFIQPKELVWRSQENLYEGLGDSPFPLHFAI
PTLQGQACWIMPEQEMAILETWLLTKESHPISFQDRALSESFYRFFALEVLYHTNQLNFDKSITPILTNQTSLPNESALC
LDICLQFQEQIVWGRLIISKDLRRSWVEHFASRGPSHLTTELAKAIDIQVHLEVGKTTLSLKEWSSVCLGDFIVLDSCSL
DPQELTGRLMLTVNGKPAHRGKIKDGVIKILETPLIQEVETPLQELNMPQEELPMVKQSEEDDDDLSDLNFTEDEDEDED
FDFEDDEEETEDDDENFTLDEVTEEEQSSPKNNASQSSPASSITENTKTGLITPNQIPVNLTVEVGRIQMSMDHLLKLEP
GNMLELNIKPEDGVDLTINGKIVGRGELLRIGEVLGVRVLELGH

Specific function: Flin Is One Of Three Proteins (Flig, Flin, Flim) That Form A Switch Complex That Is Proposed To Be Located At The Base Of The Basal Body. This Complex Interacts With The Chey And Chez Chemotaxis Proteins, In Addition To Contacting Components Of The Motor

COG id: COG1886

COG function: function code NU; Flagellar motor switch/type III secretory pathway protein

Gene ontology:

Cell location: Inner Membrane-Associated [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 50373; Mature: 50242

Theoretical pI: Translated: 4.07; Mature: 4.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATPSASYDWIRTIDPELKNLDEIPLTGSAPPFPWEELSQRIAKSFDREGLFIQPKELVW
CCCCCCCCCHHEECCHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEECHHHHHH
RSQENLYEGLGDSPFPLHFAIPTLQGQACWIMPEQEMAILETWLLTKESHPISFQDRALS
CCHHHHHHCCCCCCCEEEEEEECCCCCEEEEECCHHHHHHHHHHHCCCCCCCCHHHHHHH
ESFYRFFALEVLYHTNQLNFDKSITPILTNQTSLPNESALCLDICLQFQEQIVWGRLIIS
HHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
KDLRRSWVEHFASRGPSHLTTELAKAIDIQVHLEVGKTTLSLKEWSSVCLGDFIVLDSCS
HHHHHHHHHHHHHCCCCHHHHHHHHHEEEEEEEEECCEEEEHHHHHHHHHHCEEEEECCC
LDPQELTGRLMLTVNGKPAHRGKIKDGVIKILETPLIQEVETPLQELNMPQEELPMVKQS
CCHHHCCCEEEEEECCCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHCCCCHHHCCHHHCC
EEDDDDLSDLNFTEDEDEDEDFDFEDDEEETEDDDENFTLDEVTEEEQSSPKNNASQSSP
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCC
ASSITENTKTGLITPNQIPVNLTVEVGRIQMSMDHLLKLEPGNMLELNIKPEDGVDLTIN
CHHHHCCCCCCCCCCCCCCEEEEEEECEEEECHHHHEEECCCCEEEEEECCCCCEEEEEC
GKIVGRGELLRIGEVLGVRVLELGH
CEEECCCCHHHHHHHHCEEEEECCC
>Mature Secondary Structure 
ATPSASYDWIRTIDPELKNLDEIPLTGSAPPFPWEELSQRIAKSFDREGLFIQPKELVW
CCCCCCCCHHEECCHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEECHHHHHH
RSQENLYEGLGDSPFPLHFAIPTLQGQACWIMPEQEMAILETWLLTKESHPISFQDRALS
CCHHHHHHCCCCCCCEEEEEEECCCCCEEEEECCHHHHHHHHHHHCCCCCCCCHHHHHHH
ESFYRFFALEVLYHTNQLNFDKSITPILTNQTSLPNESALCLDICLQFQEQIVWGRLIIS
HHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
KDLRRSWVEHFASRGPSHLTTELAKAIDIQVHLEVGKTTLSLKEWSSVCLGDFIVLDSCS
HHHHHHHHHHHHHCCCCHHHHHHHHHEEEEEEEEECCEEEEHHHHHHHHHHCEEEEECCC
LDPQELTGRLMLTVNGKPAHRGKIKDGVIKILETPLIQEVETPLQELNMPQEELPMVKQS
CCHHHCCCEEEEEECCCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHCCCCHHHCCHHHCC
EEDDDDLSDLNFTEDEDEDEDFDFEDDEEETEDDDENFTLDEVTEEEQSSPKNNASQSSP
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCC
ASSITENTKTGLITPNQIPVNLTVEVGRIQMSMDHLLKLEPGNMLELNIKPEDGVDLTIN
CHHHHCCCCCCCCCCCCCCEEEEEEECEEEECHHHHEEECCCCEEEEEECCCCCEEEEEC
GKIVGRGELLRIGEVLGVRVLELGH
CEEECCCCHHHHHHHHCEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA