| Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
|---|---|
| Accession | NC_005861 |
| Length | 2,414,465 |
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The map label for this gene is 46447029
Identifier: 46447029
GI number: 46447029
Start: 1672066
End: 1672344
Strand: Direct
Name: 46447029
Synonym: pc1395
Alternate gene names: NA
Gene position: 1672066-1672344 (Clockwise)
Preceding gene: 46447028
Following gene: 46447030
Centisome position: 69.25
GC content: 39.78
Gene sequence:
>279_bases ATGGCGACTGGTGGAGGAAGTAGTGGTGATTTTCAAGGTAACTACGTAGGGGAAGGATTTAAAGTTGACTTTTTGATTAG CATTGTTAACGATGCGACAGTTAGTGCAAAAAGAAAACTGGAAATCTTGAAAGCAAGACGTAGTTCTATCAGTATTGCTG ATATGTTCGACATGCAAATGTTGATGAATCACCTATCTCAATTATCAGAGATGTCCACGGCTGTTGTGAGTGCATCCAAC TCAGCAATCTCATCAATGGCTCGTAACGTTAAAGGATAA
Upstream 100 bases:
>100_bases AGACTTTAATTCTCTTTAAACTTCAGGAAGTGTAATTTCCCAAATCTGAATTCCCTACTGAACTTATTAACATTAATAAG CAGAAGTAGTAGGAGGAAAT
Downstream 100 bases:
>100_bases TTGTCGGTTAGTTAGACTTCAGTCTAACCCCGAACTTGACCCTAAGAAGGATTTAACCTTCAAAGTTTTTTCTAAAATTA GGAGATTGAATTTTTCTTGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 92; Mature: 91
Protein sequence:
>92_residues MATGGGSSGDFQGNYVGEGFKVDFLISIVNDATVSAKRKLEILKARRSSISIADMFDMQMLMNHLSQLSEMSTAVVSASN SAISSMARNVKG
Sequences:
>Translated_92_residues MATGGGSSGDFQGNYVGEGFKVDFLISIVNDATVSAKRKLEILKARRSSISIADMFDMQMLMNHLSQLSEMSTAVVSASN SAISSMARNVKG >Mature_91_residues ATGGGSSGDFQGNYVGEGFKVDFLISIVNDATVSAKRKLEILKARRSSISIADMFDMQMLMNHLSQLSEMSTAVVSASNS AISSMARNVKG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9766; Mature: 9635
Theoretical pI: Translated: 9.16; Mature: 9.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 7.6 %Met (Translated Protein) 7.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 6.6 %Met (Mature Protein) 6.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATGGGSSGDFQGNYVGEGFKVDFLISIVNDATVSAKRKLEILKARRSSISIADMFDMQM CCCCCCCCCCCCCCCCCCCEEHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHH LMNHLSQLSEMSTAVVSASNSAISSMARNVKG HHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCC >Mature Secondary Structure ATGGGSSGDFQGNYVGEGFKVDFLISIVNDATVSAKRKLEILKARRSSISIADMFDMQM CCCCCCCCCCCCCCCCCCEEHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHH LMNHLSQLSEMSTAVVSASNSAISSMARNVKG HHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA