| Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
|---|---|
| Accession | NC_005861 |
| Length | 2,414,465 |
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The map label for this gene is 46447028
Identifier: 46447028
GI number: 46447028
Start: 1671073
End: 1671756
Strand: Direct
Name: 46447028
Synonym: pc1394
Alternate gene names: NA
Gene position: 1671073-1671756 (Clockwise)
Preceding gene: 46447027
Following gene: 46447029
Centisome position: 69.21
GC content: 33.04
Gene sequence:
>684_bases TTGGGTTATAGTGAAATGATGCAAAAGATGGCTCTTATCATTCCTTATCGTAATCGAGAAGAGCATCTAAAAATATTTCT CACAGAGTTCCCAGAGAAGATTCAAAAAATATCTCCTCATGTTCAATATACTATTTTTATCATTGAGCAAGCGGAGGGCA AACTTTTTAATCGAGGTAAACTTTTAAATGTTGGATATACATTAACACAAGAAACTTTTGATTATTTCTGCTTTCATGAT GTAGATATGTTACCAACTACCTCAGACTATTCTTATCCAATTGTTCCTACTCATCTTGCAGCTGACGTGAGCCAGTTTCG AGAATGGATGGGTAATGGACTTGCCTATAAAAATTATTTTGGCGGAGTTGTTTTATTCAACAAAGCAGATTTTGTTAAAG TTAATGGGTATTCTAATCGTTATTGGGGATATGGAGTTGAAGACGATGATTTAATAGTTCGTGTGGTTGAAAATAACTTA AATTGGGTTCGTAAACCAGGTGTGTATGAAAGCCTCACTCACGCTTATTCAGGAGGTACTCCAGAACATCAAGCAAATAA AACTCGCTTCATCAATCTTTTAAAAAATTTAGAAGAAGATTTGTCAGGTTTATCTGATCTCAATTATCAGGTTTTAAACA GCAAAATATTTTCTAATTATACCCAATATTTAGTAGATATTTAA
Upstream 100 bases:
>100_bases CACTCGAATGGGCAGAAAAAGATTTATCTAAAGTTTCAAAAGCTCCCTTCTTCACCAAACAAAATCAAGAAAAAAATGAA AGCGAAGAATAAGGTCTTTT
Downstream 100 bases:
>100_bases AATATTAACCGTTTGTTTTTAAATAAATTTTAATTATCTAAAATCAAATTATTTATTTAATAAAATATTCACTATATTGA TTTAATTATTAGAATTTGCT
Product: putative udpgalactose-glucose galactosyltransferase
Products: NA
Alternate protein names: Udpgalactose-Glucose Galactosyltransferase
Number of amino acids: Translated: 227; Mature: 226
Protein sequence:
>227_residues MGYSEMMQKMALIIPYRNREEHLKIFLTEFPEKIQKISPHVQYTIFIIEQAEGKLFNRGKLLNVGYTLTQETFDYFCFHD VDMLPTTSDYSYPIVPTHLAADVSQFREWMGNGLAYKNYFGGVVLFNKADFVKVNGYSNRYWGYGVEDDDLIVRVVENNL NWVRKPGVYESLTHAYSGGTPEHQANKTRFINLLKNLEEDLSGLSDLNYQVLNSKIFSNYTQYLVDI
Sequences:
>Translated_227_residues MGYSEMMQKMALIIPYRNREEHLKIFLTEFPEKIQKISPHVQYTIFIIEQAEGKLFNRGKLLNVGYTLTQETFDYFCFHD VDMLPTTSDYSYPIVPTHLAADVSQFREWMGNGLAYKNYFGGVVLFNKADFVKVNGYSNRYWGYGVEDDDLIVRVVENNL NWVRKPGVYESLTHAYSGGTPEHQANKTRFINLLKNLEEDLSGLSDLNYQVLNSKIFSNYTQYLVDI >Mature_226_residues GYSEMMQKMALIIPYRNREEHLKIFLTEFPEKIQKISPHVQYTIFIIEQAEGKLFNRGKLLNVGYTLTQETFDYFCFHDV DMLPTTSDYSYPIVPTHLAADVSQFREWMGNGLAYKNYFGGVVLFNKADFVKVNGYSNRYWGYGVEDDDLIVRVVENNLN WVRKPGVYESLTHAYSGGTPEHQANKTRFINLLKNLEEDLSGLSDLNYQVLNSKIFSNYTQYLVDI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI13929462, Length=224, Percent_Identity=37.5, Blast_Score=139, Evalue=2e-33, Organism=Homo sapiens, GI47078258, Length=230, Percent_Identity=36.5217391304348, Blast_Score=132, Evalue=3e-31, Organism=Homo sapiens, GI9994175, Length=230, Percent_Identity=36.5217391304348, Blast_Score=132, Evalue=3e-31, Organism=Homo sapiens, GI4502349, Length=233, Percent_Identity=35.1931330472103, Blast_Score=116, Evalue=1e-26, Organism=Homo sapiens, GI53759113, Length=229, Percent_Identity=33.1877729257642, Blast_Score=112, Evalue=2e-25, Organism=Homo sapiens, GI4502347, Length=229, Percent_Identity=33.1877729257642, Blast_Score=112, Evalue=2e-25, Organism=Homo sapiens, GI4757828, Length=210, Percent_Identity=34.2857142857143, Blast_Score=109, Evalue=2e-24, Organism=Homo sapiens, GI190570165, Length=225, Percent_Identity=33.3333333333333, Blast_Score=109, Evalue=2e-24, Organism=Homo sapiens, GI6005952, Length=175, Percent_Identity=30.8571428571429, Blast_Score=97, Evalue=8e-21, Organism=Caenorhabditis elegans, GI17510623, Length=228, Percent_Identity=35.5263157894737, Blast_Score=139, Evalue=9e-34, Organism=Caenorhabditis elegans, GI17536691, Length=178, Percent_Identity=35.3932584269663, Blast_Score=103, Evalue=8e-23, Organism=Caenorhabditis elegans, GI17554812, Length=215, Percent_Identity=29.3023255813954, Blast_Score=98, Evalue=3e-21, Organism=Drosophila melanogaster, GI19922240, Length=230, Percent_Identity=35.2173913043478, Blast_Score=124, Evalue=4e-29, Organism=Drosophila melanogaster, GI24650918, Length=228, Percent_Identity=35.0877192982456, Blast_Score=115, Evalue=2e-26, Organism=Drosophila melanogaster, GI24649875, Length=218, Percent_Identity=29.3577981651376, Blast_Score=100, Evalue=5e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 2.4.1.-; 2.4.1.22; 2.4.1.90; 2.4.1.38
Molecular weight: Translated: 26409; Mature: 26278
Theoretical pI: Translated: 5.61; Mature: 5.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGYSEMMQKMALIIPYRNREEHLKIFLTEFPEKIQKISPHVQYTIFIIEQAEGKLFNRGK CCHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCEECCCE LLNVGYTLTQETFDYFCFHDVDMLPTTSDYSYPIVPTHLAADVSQFREWMGNGLAYKNYF EEECCEEEHHHHHHHHHEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEHHCC GGVVLFNKADFVKVNGYSNRYWGYGVEDDDLIVRVVENNLNWVRKPGVYESLTHAYSGGT CCEEEECCCCEEEECCCCCCCCCCCCCCCCEEEEEECCCCCEEECCCHHHHHHHHHCCCC PEHQANKTRFINLLKNLEEDLSGLSDLNYQVLNSKIFSNYTQYLVDI CCHHCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure GYSEMMQKMALIIPYRNREEHLKIFLTEFPEKIQKISPHVQYTIFIIEQAEGKLFNRGK CHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCEECCCE LLNVGYTLTQETFDYFCFHDVDMLPTTSDYSYPIVPTHLAADVSQFREWMGNGLAYKNYF EEECCEEEHHHHHHHHHEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEHHCC GGVVLFNKADFVKVNGYSNRYWGYGVEDDDLIVRVVENNLNWVRKPGVYESLTHAYSGGT CCEEEECCCCEEEECCCCCCCCCCCCCCCCEEEEEECCCCCEEECCCHHHHHHHHHCCCC PEHQANKTRFINLLKNLEEDLSGLSDLNYQVLNSKIFSNYTQYLVDI CCHHCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA