| Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
|---|---|
| Accession | NC_005861 |
| Length | 2,414,465 |
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The map label for this gene is 46447024
Identifier: 46447024
GI number: 46447024
Start: 1667910
End: 1668296
Strand: Direct
Name: 46447024
Synonym: pc1390
Alternate gene names: NA
Gene position: 1667910-1668296 (Clockwise)
Preceding gene: 46447023
Following gene: 46447025
Centisome position: 69.08
GC content: 33.33
Gene sequence:
>387_bases ATGTTAGACTCTTTTGTGCATCAGTTAGCTCGTGAACTTGAAATGGAAGATTTAATTATTTCTCCAGAGCCTAATTATTT TACTATCCCTTTTGCAGATGATATTCAGGTTGATATGACGCAGTTTCACCAAAGTTATTTATTAAAAGGAAATATTGGAG CTTGTCCGAAAAACAATCTGGATCAATATTTCCTCAAATTGATGGAAGCAAATTTATTTGGTCGCGGCACGAGAGGGACA GGAATAGGTTTGAACAAAGAAGAGAATTTATTGACGCTTTCACTTGAGCTAGATTACAATATTTCTTATAAAAATTTTAG AGAACGATTGGAAGATTTCATAAGTATTTTGGATTTCTGGCGAAAAGAAGCGTTAAAACATCAATAG
Upstream 100 bases:
>100_bases ATAAAAAGCCGAGCAAGGCTTATTGAGAGACCTTTTGCCTGTCCAATTTTCTAGACTTTCTAGTCTATAATATCATTTAC CGATGTCTTAGGAAAAACTT
Downstream 100 bases:
>100_bases ATTCTTTCTTATCACTGTGATAAGCTGACTTAAAAATACTTTTCTTTAACTCAATGGGTAAATTATGGTAGCGCGACTAG TTGTAGAAGAAGGTGACTTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 128; Mature: 128
Protein sequence:
>128_residues MLDSFVHQLARELEMEDLIISPEPNYFTIPFADDIQVDMTQFHQSYLLKGNIGACPKNNLDQYFLKLMEANLFGRGTRGT GIGLNKEENLLTLSLELDYNISYKNFRERLEDFISILDFWRKEALKHQ
Sequences:
>Translated_128_residues MLDSFVHQLARELEMEDLIISPEPNYFTIPFADDIQVDMTQFHQSYLLKGNIGACPKNNLDQYFLKLMEANLFGRGTRGT GIGLNKEENLLTLSLELDYNISYKNFRERLEDFISILDFWRKEALKHQ >Mature_128_residues MLDSFVHQLARELEMEDLIISPEPNYFTIPFADDIQVDMTQFHQSYLLKGNIGACPKNNLDQYFLKLMEANLFGRGTRGT GIGLNKEENLLTLSLELDYNISYKNFRERLEDFISILDFWRKEALKHQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15008; Mature: 15008
Theoretical pI: Translated: 4.62; Mature: 4.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLDSFVHQLARELEMEDLIISPEPNYFTIPFADDIQVDMTQFHQSYLLKGNIGACPKNNL CHHHHHHHHHHHCCHHHEEECCCCCEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCCH DQYFLKLMEANLFGRGTRGTGIGLNKEENLLTLSLELDYNISYKNFRERLEDFISILDFW HHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHH RKEALKHQ HHHHHCCC >Mature Secondary Structure MLDSFVHQLARELEMEDLIISPEPNYFTIPFADDIQVDMTQFHQSYLLKGNIGACPKNNL CHHHHHHHHHHHCCHHHEEECCCCCEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCCH DQYFLKLMEANLFGRGTRGTGIGLNKEENLLTLSLELDYNISYKNFRERLEDFISILDFW HHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHH RKEALKHQ HHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA