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The map label for this gene is 46446947

Identifier: 46446947

GI number: 46446947

Start: 1569628

End: 1570281

Strand: Direct

Name: 46446947

Synonym: pc1313

Alternate gene names: NA

Gene position: 1569628-1570281 (Clockwise)

Preceding gene: 161611305

Following gene: 46446951

Centisome position: 65.01

GC content: 35.32

Gene sequence:

>654_bases
ATGCTAAAAAAACTTAAACAAGGGTGGAAAAATTTCTCTTATCGATGCTTTGCTTTTCTTATTGCGACAATAGGTAAAGC
CTTAATTCGTATTTTGTTAGCCACATGTCGTTCAAAAGTTCATGGACTAGAAAAATATATTAAAATTGCCGAAAAAGAAA
AATGCATTGTCATGTTTTGGCATAATCGATTAGCGCTTGCTCCTTTTATCCTTTATCACTTGACTCCCCAATTTATTTAC
GCCGCTTTTATTAGTAATAGTCGAGATGGAGAATTAATTGGAAGAATTGTTCGCTCCTATAAAACAGGCAGAGTCATTCG
AGTTCCTCATCATTCTCGACATGAAGCATTACGTGAAATGATTCGACACGTTAATTTTAAAAAATCTATCGCTATTATTA
CACCAGATGGGCCTAGAGGACCTCGCTACAAAATGAAACCTGGAATTGCTTTGGCAGCCATTGAAACTGGTGCCTATGTG
TTCCCTTTGAATTGGACGGCAACCAGCTTTTTTACATTCAAAACTTGGGATCAATTACGACTTCCCAAACCCTTTAGTAC
AATTGAATTTTTTTTTGGTGAGCCTATTAAATTTAGTTCAGATGTTCCTCTGAATATTGCTCAAACCTATCTTCAAAAAT
CTCTAAAAGAATAA

Upstream 100 bases:

>100_bases
CACTATGACAGCGTTATCGGAGATTGTGCCATTTTACGCCAGCAATTGGGAGATGGTATAGCTTCCAGCCTTGCAAGTCG
AGAGATCCAGGAGCTATTAA

Downstream 100 bases:

>100_bases
CATACATACGATGCCCAAGAATAATGAGCATTGAAGAGACAAATTGAATGACACAAATTATAAAGTTTCGACGTTTAATT
CTTGTTTGAGCTGAGAAATA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 217; Mature: 217

Protein sequence:

>217_residues
MLKKLKQGWKNFSYRCFAFLIATIGKALIRILLATCRSKVHGLEKYIKIAEKEKCIVMFWHNRLALAPFILYHLTPQFIY
AAFISNSRDGELIGRIVRSYKTGRVIRVPHHSRHEALREMIRHVNFKKSIAIITPDGPRGPRYKMKPGIALAAIETGAYV
FPLNWTATSFFTFKTWDQLRLPKPFSTIEFFFGEPIKFSSDVPLNIAQTYLQKSLKE

Sequences:

>Translated_217_residues
MLKKLKQGWKNFSYRCFAFLIATIGKALIRILLATCRSKVHGLEKYIKIAEKEKCIVMFWHNRLALAPFILYHLTPQFIY
AAFISNSRDGELIGRIVRSYKTGRVIRVPHHSRHEALREMIRHVNFKKSIAIITPDGPRGPRYKMKPGIALAAIETGAYV
FPLNWTATSFFTFKTWDQLRLPKPFSTIEFFFGEPIKFSSDVPLNIAQTYLQKSLKE
>Mature_217_residues
MLKKLKQGWKNFSYRCFAFLIATIGKALIRILLATCRSKVHGLEKYIKIAEKEKCIVMFWHNRLALAPFILYHLTPQFIY
AAFISNSRDGELIGRIVRSYKTGRVIRVPHHSRHEALREMIRHVNFKKSIAIITPDGPRGPRYKMKPGIALAAIETGAYV
FPLNWTATSFFTFKTWDQLRLPKPFSTIEFFFGEPIKFSSDVPLNIAQTYLQKSLKE

Specific function: Unknown

COG id: COG2121

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To H.pylori HP0270 [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007172
- ProDom:   PD032436 [H]

Pfam domain/function: PF04028 DUF374 [H]

EC number: NA

Molecular weight: Translated: 25153; Mature: 25153

Theoretical pI: Translated: 10.80; Mature: 10.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKKLKQGWKNFSYRCFAFLIATIGKALIRILLATCRSKVHGLEKYIKIAEKEKCIVMFW
CCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEE
HNRLALAPFILYHLTPQFIYAAFISNSRDGELIGRIVRSYKTGRVIRVPHHSRHEALREM
CCHHHHHHHHHHHHCHHHHHHHHHCCCCCHHHHHHHHHHHCCCCEEECCCCCHHHHHHHH
IRHVNFKKSIAIITPDGPRGPRYKMKPGIALAAIETGAYVFPLNWTATSFFTFKTWDQLR
HHHCCCCCCEEEECCCCCCCCCEECCCCEEEEEEECCCEEEEECCCEEEEEEEECCCCCC
LPKPFSTIEFFFGEPIKFSSDVPLNIAQTYLQKSLKE
CCCCHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCC
>Mature Secondary Structure
MLKKLKQGWKNFSYRCFAFLIATIGKALIRILLATCRSKVHGLEKYIKIAEKEKCIVMFW
CCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEE
HNRLALAPFILYHLTPQFIYAAFISNSRDGELIGRIVRSYKTGRVIRVPHHSRHEALREM
CCHHHHHHHHHHHHCHHHHHHHHHCCCCCHHHHHHHHHHHCCCCEEECCCCCHHHHHHHH
IRHVNFKKSIAIITPDGPRGPRYKMKPGIALAAIETGAYVFPLNWTATSFFTFKTWDQLR
HHHCCCCCCEEEECCCCCCCCCEECCCCEEEEEEECCCEEEEECCCEEEEEEEECCCCCC
LPKPFSTIEFFFGEPIKFSSDVPLNIAQTYLQKSLKE
CCCCHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9823893 [H]