Definition Candidatus Protochlamydia amoebophila UWE25, complete genome.
Accession NC_005861
Length 2,414,465

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The map label for this gene is 46446934

Identifier: 46446934

GI number: 46446934

Start: 1556564

End: 1557079

Strand: Direct

Name: 46446934

Synonym: pc1300

Alternate gene names: NA

Gene position: 1556564-1557079 (Clockwise)

Preceding gene: 46446933

Following gene: 46446936

Centisome position: 64.47

GC content: 34.69

Gene sequence:

>516_bases
TTGGCTGAAAGTTTAGAACGATTTTATTTGCCAATGGATCTTGTCGCTGTCCCTACACAAGGAAGCTGGCAAGCTAATAC
GCAATATAAGGCTTACTTTATTAAACAAATGCTTGTTCGCCATTATCCTAAAAATATTTTATACTTAGATGCAGATGCAA
GAGTTCAACAGTATCCCGCCCTATTTGATCAAATAGATGCAGATTTAGCCGTTTTTTATTGGCATAACAAAGAACTGATT
AGTAGTACGCTCTACTTTGCTAATAATGCTAAAATTGCCGAGTTAATAGAAAGATGGATCACTTGTTGTTTTGAAAACCC
TGATATTTGGGATCAAAAAGTTTTACAATATGTCATTCAAGAATCAAAAGATCTTAACCTGAGAATTGACATGCTTCCCC
CCTCTTATTGTCAAATTTTTGATTTGATGCAACAAGAAGGAGAACCAGTCATTGAACAATTTCAAGCAAGCCGCCGTTTT
AAAACTCAAATAGATTCTTCAAAGAATGAAGCTTAA

Upstream 100 bases:

>100_bases
ATGTACAAACATTTGTTTCTAACCTTTTTGATTAAATATGGCATATATTACTGTTGGTTATTTTACAGAAAACACTCCTT
ACGAAGAAGAAATTCGTCAT

Downstream 100 bases:

>100_bases
AAGGCGACATATGTTGGATTAGAGCTTTTCGTTAATCCTAGATTAAATGTATTTGTCCAAGTTTTAAAATGATCCGCATA
AGTTTGATCAATGCATCCTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 171; Mature: 170

Protein sequence:

>171_residues
MAESLERFYLPMDLVAVPTQGSWQANTQYKAYFIKQMLVRHYPKNILYLDADARVQQYPALFDQIDADLAVFYWHNKELI
SSTLYFANNAKIAELIERWITCCFENPDIWDQKVLQYVIQESKDLNLRIDMLPPSYCQIFDLMQQEGEPVIEQFQASRRF
KTQIDSSKNEA

Sequences:

>Translated_171_residues
MAESLERFYLPMDLVAVPTQGSWQANTQYKAYFIKQMLVRHYPKNILYLDADARVQQYPALFDQIDADLAVFYWHNKELI
SSTLYFANNAKIAELIERWITCCFENPDIWDQKVLQYVIQESKDLNLRIDMLPPSYCQIFDLMQQEGEPVIEQFQASRRF
KTQIDSSKNEA
>Mature_170_residues
AESLERFYLPMDLVAVPTQGSWQANTQYKAYFIKQMLVRHYPKNILYLDADARVQQYPALFDQIDADLAVFYWHNKELIS
STLYFANNAKIAELIERWITCCFENPDIWDQKVLQYVIQESKDLNLRIDMLPPSYCQIFDLMQQEGEPVIEQFQASRRFK
TQIDSSKNEA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20220; Mature: 20089

Theoretical pI: Translated: 4.57; Mature: 4.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAESLERFYLPMDLVAVPTQGSWQANTQYKAYFIKQMLVRHYPKNILYLDADARVQQYPA
CCCCHHHHCCCHHEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHH
LFDQIDADLAVFYWHNKELISSTLYFANNAKIAELIERWITCCFENPDIWDQKVLQYVIQ
HHHHHCCCEEEEEECCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
ESKDLNLRIDMLPPSYCQIFDLMQQEGEPVIEQFQASRRFKTQIDSSKNEA
CCCCCEEEEECCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
AESLERFYLPMDLVAVPTQGSWQANTQYKAYFIKQMLVRHYPKNILYLDADARVQQYPA
CCCHHHHCCCHHEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHH
LFDQIDADLAVFYWHNKELISSTLYFANNAKIAELIERWITCCFENPDIWDQKVLQYVIQ
HHHHHCCCEEEEEECCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
ESKDLNLRIDMLPPSYCQIFDLMQQEGEPVIEQFQASRRFKTQIDSSKNEA
CCCCCEEEEECCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA