| Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
|---|---|
| Accession | NC_005861 |
| Length | 2,414,465 |
Click here to switch to the map view.
The map label for this gene is 46446863
Identifier: 46446863
GI number: 46446863
Start: 1463679
End: 1463954
Strand: Direct
Name: 46446863
Synonym: pc1229
Alternate gene names: NA
Gene position: 1463679-1463954 (Clockwise)
Preceding gene: 46446862
Following gene: 46446865
Centisome position: 60.62
GC content: 43.48
Gene sequence:
>276_bases ATGAATTTTTGGGATTCCCACGGTATTTTCTTTTTACTCTTTATCACGCTATTTCCTAGGTTGACAATGCTTTTTGCGGT TACCATCCCCTTTAATCCCCTTACTTGGATGGGTTGGCTCTTTGCCCCTCATTTAACAGTTGCCATTTTAGCCACCCAAT ATTATTGGCAAACCAATCCCATTCTATGCATCATTGCTTGGTTTGTTGCTTTAGCAGGAACAGGTGGAGAAGCTAAAGTA GTGACAGTCGGAGCCCGCTACCGTCGATGGCAGTAA
Upstream 100 bases:
>100_bases TTAACTAATTCTCATTCGATTCGGGATGTCCTTTATTTTCCTTGGATGAAAACAATTTAAAACACATCGCTATAACGGGC TAATCTGAAAGGAGAATTTT
Downstream 100 bases:
>100_bases ATTAAAAACTCAAGTAAAAATAGCCACAGAAATTCGGATGTAAGGTTTCCCCTTGTTCCTTATCAGGGAAAAGGGGGAAA ATGAGTTTTAGAGAAATAAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 91; Mature: 91
Protein sequence:
>91_residues MNFWDSHGIFFLLFITLFPRLTMLFAVTIPFNPLTWMGWLFAPHLTVAILATQYYWQTNPILCIIAWFVALAGTGGEAKV VTVGARYRRWQ
Sequences:
>Translated_91_residues MNFWDSHGIFFLLFITLFPRLTMLFAVTIPFNPLTWMGWLFAPHLTVAILATQYYWQTNPILCIIAWFVALAGTGGEAKV VTVGARYRRWQ >Mature_91_residues MNFWDSHGIFFLLFITLFPRLTMLFAVTIPFNPLTWMGWLFAPHLTVAILATQYYWQTNPILCIIAWFVALAGTGGEAKV VTVGARYRRWQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10541; Mature: 10541
Theoretical pI: Translated: 9.80; Mature: 9.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNFWDSHGIFFLLFITLFPRLTMLFAVTIPFNPLTWMGWLFAPHLTVAILATQYYWQTNP CCCCCCCCHHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHHHHHHEECCCC ILCIIAWFVALAGTGGEAKVVTVGARYRRWQ HHHHHHHHHHHCCCCCCEEEEEECCCCCCCC >Mature Secondary Structure MNFWDSHGIFFLLFITLFPRLTMLFAVTIPFNPLTWMGWLFAPHLTVAILATQYYWQTNP CCCCCCCCHHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHHHHHHEECCCC ILCIIAWFVALAGTGGEAKVVTVGARYRRWQ HHHHHHHHHHHCCCCCCEEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA