Definition Candidatus Protochlamydia amoebophila UWE25, complete genome.
Accession NC_005861
Length 2,414,465

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The map label for this gene is 46446858

Identifier: 46446858

GI number: 46446858

Start: 1456803

End: 1457747

Strand: Direct

Name: 46446858

Synonym: pc1224

Alternate gene names: NA

Gene position: 1456803-1457747 (Clockwise)

Preceding gene: 46446857

Following gene: 46446859

Centisome position: 60.34

GC content: 34.92

Gene sequence:

>945_bases
ATGGAAAATATTAGGGAAAAATATACACAGCTTTTATCATTAACACGACTCTTTCTAGCTAGAGAGCATAAACTAAATGA
AACTCTCTTAAGTTTTCCTAACTCTTACGCACATTTTAAACCTTTTTTAAGCCATTCTCTAAAAAATCAACAATCAATTA
AAAATCAATCTTTTGCCTCCTCTAATAACGTCAAACAAGTCCCCCCCCCTTCTTCTTTTTCTACTGACCCTTATTCAAAG
CCGCCTACTTCACCAGATTTGCGGCCGTCTACACCTCCCCTTACTATTTTCTCCCCTAATCCTCAACCCACTACCACTGA
ACCTGAAAGCCCTCAGCTACAAAAAAAAGAGCCTGAGATTTTAAAACAAGTTGAAAAAACAAAATTTCCTCCTCTTCTTA
CTTTAGAACCCATGGTTGCCGTTTCTCCTACAATTGAAAATCAAGAGTTCAAAGAAATTTTAAAAAAAAATTTCCCCTCT
TATACACTTTCTAGCACTATTCCAAATGATCAATTTGCCAAAAAATTAATGAATAAATGGACGTACGAACGGCAAGTACC
GTCCATCGTGATTCTCTCTTTTGGTAACCAGGAAAGTCATTTAAAACTTTTAAAAAATATTGCTAAAGCAATTAGTTTAC
GTTTTGCTCCATCAAGAGTCGTCTCTGCATTAAAATTGGAAAAAGAAAAACAATGGAATAAATTATTCGAAGCTAAAGAA
CTATGCCTTGTCATTGCCAGTGATTATCATCTCTATTTACAACCAGATTTAATGAGTTATTATAGAGAAGAACCTAAACT
AGGCAAACATTTCCTTCAACAAACTCCCCTTCTTTTGCTCTCCGATCTAGATCTTTACCTTAAAGAACCTCAGCTAAAAT
CTCTCTTGTGGAGAGCTATATGTAATGAATTAACACCTCTCACGAAAATCTCAACAACTAGCTAA

Upstream 100 bases:

>100_bases
ACAAAATACTTTACTCCCTCTCTTAATACAACGGTATGAGCAAAGGGGATTCCATTATTTAAATTTAGAGAAAAGACAAA
TGCTTCAAAGGGGATTGTAA

Downstream 100 bases:

>100_bases
AAATGAAAACTTTTGCCGCTATTGCTTCGGTTATTTTAGATATATCGATTGACAAAACATTAGATTATGGAATTGTTCCT
TCGCAATTAGAAGCAGCTCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 314; Mature: 314

Protein sequence:

>314_residues
MENIREKYTQLLSLTRLFLAREHKLNETLLSFPNSYAHFKPFLSHSLKNQQSIKNQSFASSNNVKQVPPPSSFSTDPYSK
PPTSPDLRPSTPPLTIFSPNPQPTTTEPESPQLQKKEPEILKQVEKTKFPPLLTLEPMVAVSPTIENQEFKEILKKNFPS
YTLSSTIPNDQFAKKLMNKWTYERQVPSIVILSFGNQESHLKLLKNIAKAISLRFAPSRVVSALKLEKEKQWNKLFEAKE
LCLVIASDYHLYLQPDLMSYYREEPKLGKHFLQQTPLLLLSDLDLYLKEPQLKSLLWRAICNELTPLTKISTTS

Sequences:

>Translated_314_residues
MENIREKYTQLLSLTRLFLAREHKLNETLLSFPNSYAHFKPFLSHSLKNQQSIKNQSFASSNNVKQVPPPSSFSTDPYSK
PPTSPDLRPSTPPLTIFSPNPQPTTTEPESPQLQKKEPEILKQVEKTKFPPLLTLEPMVAVSPTIENQEFKEILKKNFPS
YTLSSTIPNDQFAKKLMNKWTYERQVPSIVILSFGNQESHLKLLKNIAKAISLRFAPSRVVSALKLEKEKQWNKLFEAKE
LCLVIASDYHLYLQPDLMSYYREEPKLGKHFLQQTPLLLLSDLDLYLKEPQLKSLLWRAICNELTPLTKISTTS
>Mature_314_residues
MENIREKYTQLLSLTRLFLAREHKLNETLLSFPNSYAHFKPFLSHSLKNQQSIKNQSFASSNNVKQVPPPSSFSTDPYSK
PPTSPDLRPSTPPLTIFSPNPQPTTTEPESPQLQKKEPEILKQVEKTKFPPLLTLEPMVAVSPTIENQEFKEILKKNFPS
YTLSSTIPNDQFAKKLMNKWTYERQVPSIVILSFGNQESHLKLLKNIAKAISLRFAPSRVVSALKLEKEKQWNKLFEAKE
LCLVIASDYHLYLQPDLMSYYREEPKLGKHFLQQTPLLLLSDLDLYLKEPQLKSLLWRAICNELTPLTKISTTS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36125; Mature: 36125

Theoretical pI: Translated: 9.88; Mature: 9.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MENIREKYTQLLSLTRLFLAREHKLNETLLSFPNSYAHFKPFLSHSLKNQQSIKNQSFAS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCC
SNNVKQVPPPSSFSTDPYSKPPTSPDLRPSTPPLTIFSPNPQPTTTEPESPQLQKKEPEI
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCHHH
LKQVEKTKFPPLLTLEPMVAVSPTIENQEFKEILKKNFPSYTLSSTIPNDQFAKKLMNKW
HHHHHHHCCCCCEEECCHHHCCCCCCCHHHHHHHHHCCCCEEECCCCCCHHHHHHHHHHH
TYERQVPSIVILSFGNQESHLKLLKNIAKAISLRFAPSRVVSALKLEKEKQWNKLFEAKE
HHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
LCLVIASDYHLYLQPDLMSYYREEPKLGKHFLQQTPLLLLSDLDLYLKEPQLKSLLWRAI
HHEEEECCCEEEECHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHH
CNELTPLTKISTTS
HHHCCCCCCCCCCC
>Mature Secondary Structure
MENIREKYTQLLSLTRLFLAREHKLNETLLSFPNSYAHFKPFLSHSLKNQQSIKNQSFAS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCC
SNNVKQVPPPSSFSTDPYSKPPTSPDLRPSTPPLTIFSPNPQPTTTEPESPQLQKKEPEI
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCHHH
LKQVEKTKFPPLLTLEPMVAVSPTIENQEFKEILKKNFPSYTLSSTIPNDQFAKKLMNKW
HHHHHHHCCCCCEEECCHHHCCCCCCCHHHHHHHHHCCCCEEECCCCCCHHHHHHHHHHH
TYERQVPSIVILSFGNQESHLKLLKNIAKAISLRFAPSRVVSALKLEKEKQWNKLFEAKE
HHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
LCLVIASDYHLYLQPDLMSYYREEPKLGKHFLQQTPLLLLSDLDLYLKEPQLKSLLWRAI
HHEEEECCCEEEECHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHH
CNELTPLTKISTTS
HHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA