| Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
|---|---|
| Accession | NC_005861 |
| Length | 2,414,465 |
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The map label for this gene is 46446858
Identifier: 46446858
GI number: 46446858
Start: 1456803
End: 1457747
Strand: Direct
Name: 46446858
Synonym: pc1224
Alternate gene names: NA
Gene position: 1456803-1457747 (Clockwise)
Preceding gene: 46446857
Following gene: 46446859
Centisome position: 60.34
GC content: 34.92
Gene sequence:
>945_bases ATGGAAAATATTAGGGAAAAATATACACAGCTTTTATCATTAACACGACTCTTTCTAGCTAGAGAGCATAAACTAAATGA AACTCTCTTAAGTTTTCCTAACTCTTACGCACATTTTAAACCTTTTTTAAGCCATTCTCTAAAAAATCAACAATCAATTA AAAATCAATCTTTTGCCTCCTCTAATAACGTCAAACAAGTCCCCCCCCCTTCTTCTTTTTCTACTGACCCTTATTCAAAG CCGCCTACTTCACCAGATTTGCGGCCGTCTACACCTCCCCTTACTATTTTCTCCCCTAATCCTCAACCCACTACCACTGA ACCTGAAAGCCCTCAGCTACAAAAAAAAGAGCCTGAGATTTTAAAACAAGTTGAAAAAACAAAATTTCCTCCTCTTCTTA CTTTAGAACCCATGGTTGCCGTTTCTCCTACAATTGAAAATCAAGAGTTCAAAGAAATTTTAAAAAAAAATTTCCCCTCT TATACACTTTCTAGCACTATTCCAAATGATCAATTTGCCAAAAAATTAATGAATAAATGGACGTACGAACGGCAAGTACC GTCCATCGTGATTCTCTCTTTTGGTAACCAGGAAAGTCATTTAAAACTTTTAAAAAATATTGCTAAAGCAATTAGTTTAC GTTTTGCTCCATCAAGAGTCGTCTCTGCATTAAAATTGGAAAAAGAAAAACAATGGAATAAATTATTCGAAGCTAAAGAA CTATGCCTTGTCATTGCCAGTGATTATCATCTCTATTTACAACCAGATTTAATGAGTTATTATAGAGAAGAACCTAAACT AGGCAAACATTTCCTTCAACAAACTCCCCTTCTTTTGCTCTCCGATCTAGATCTTTACCTTAAAGAACCTCAGCTAAAAT CTCTCTTGTGGAGAGCTATATGTAATGAATTAACACCTCTCACGAAAATCTCAACAACTAGCTAA
Upstream 100 bases:
>100_bases ACAAAATACTTTACTCCCTCTCTTAATACAACGGTATGAGCAAAGGGGATTCCATTATTTAAATTTAGAGAAAAGACAAA TGCTTCAAAGGGGATTGTAA
Downstream 100 bases:
>100_bases AAATGAAAACTTTTGCCGCTATTGCTTCGGTTATTTTAGATATATCGATTGACAAAACATTAGATTATGGAATTGTTCCT TCGCAATTAGAAGCAGCTCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 314; Mature: 314
Protein sequence:
>314_residues MENIREKYTQLLSLTRLFLAREHKLNETLLSFPNSYAHFKPFLSHSLKNQQSIKNQSFASSNNVKQVPPPSSFSTDPYSK PPTSPDLRPSTPPLTIFSPNPQPTTTEPESPQLQKKEPEILKQVEKTKFPPLLTLEPMVAVSPTIENQEFKEILKKNFPS YTLSSTIPNDQFAKKLMNKWTYERQVPSIVILSFGNQESHLKLLKNIAKAISLRFAPSRVVSALKLEKEKQWNKLFEAKE LCLVIASDYHLYLQPDLMSYYREEPKLGKHFLQQTPLLLLSDLDLYLKEPQLKSLLWRAICNELTPLTKISTTS
Sequences:
>Translated_314_residues MENIREKYTQLLSLTRLFLAREHKLNETLLSFPNSYAHFKPFLSHSLKNQQSIKNQSFASSNNVKQVPPPSSFSTDPYSK PPTSPDLRPSTPPLTIFSPNPQPTTTEPESPQLQKKEPEILKQVEKTKFPPLLTLEPMVAVSPTIENQEFKEILKKNFPS YTLSSTIPNDQFAKKLMNKWTYERQVPSIVILSFGNQESHLKLLKNIAKAISLRFAPSRVVSALKLEKEKQWNKLFEAKE LCLVIASDYHLYLQPDLMSYYREEPKLGKHFLQQTPLLLLSDLDLYLKEPQLKSLLWRAICNELTPLTKISTTS >Mature_314_residues MENIREKYTQLLSLTRLFLAREHKLNETLLSFPNSYAHFKPFLSHSLKNQQSIKNQSFASSNNVKQVPPPSSFSTDPYSK PPTSPDLRPSTPPLTIFSPNPQPTTTEPESPQLQKKEPEILKQVEKTKFPPLLTLEPMVAVSPTIENQEFKEILKKNFPS YTLSSTIPNDQFAKKLMNKWTYERQVPSIVILSFGNQESHLKLLKNIAKAISLRFAPSRVVSALKLEKEKQWNKLFEAKE LCLVIASDYHLYLQPDLMSYYREEPKLGKHFLQQTPLLLLSDLDLYLKEPQLKSLLWRAICNELTPLTKISTTS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36125; Mature: 36125
Theoretical pI: Translated: 9.88; Mature: 9.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MENIREKYTQLLSLTRLFLAREHKLNETLLSFPNSYAHFKPFLSHSLKNQQSIKNQSFAS CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCC SNNVKQVPPPSSFSTDPYSKPPTSPDLRPSTPPLTIFSPNPQPTTTEPESPQLQKKEPEI CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCHHH LKQVEKTKFPPLLTLEPMVAVSPTIENQEFKEILKKNFPSYTLSSTIPNDQFAKKLMNKW HHHHHHHCCCCCEEECCHHHCCCCCCCHHHHHHHHHCCCCEEECCCCCCHHHHHHHHHHH TYERQVPSIVILSFGNQESHLKLLKNIAKAISLRFAPSRVVSALKLEKEKQWNKLFEAKE HHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH LCLVIASDYHLYLQPDLMSYYREEPKLGKHFLQQTPLLLLSDLDLYLKEPQLKSLLWRAI HHEEEECCCEEEECHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHH CNELTPLTKISTTS HHHCCCCCCCCCCC >Mature Secondary Structure MENIREKYTQLLSLTRLFLAREHKLNETLLSFPNSYAHFKPFLSHSLKNQQSIKNQSFAS CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCC SNNVKQVPPPSSFSTDPYSKPPTSPDLRPSTPPLTIFSPNPQPTTTEPESPQLQKKEPEI CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCHHH LKQVEKTKFPPLLTLEPMVAVSPTIENQEFKEILKKNFPSYTLSSTIPNDQFAKKLMNKW HHHHHHHCCCCCEEECCHHHCCCCCCCHHHHHHHHHCCCCEEECCCCCCHHHHHHHHHHH TYERQVPSIVILSFGNQESHLKLLKNIAKAISLRFAPSRVVSALKLEKEKQWNKLFEAKE HHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH LCLVIASDYHLYLQPDLMSYYREEPKLGKHFLQQTPLLLLSDLDLYLKEPQLKSLLWRAI HHEEEECCCEEEECHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHH CNELTPLTKISTTS HHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA