Definition Candidatus Protochlamydia amoebophila UWE25, complete genome.
Accession NC_005861
Length 2,414,465

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The map label for this gene is 46446848

Identifier: 46446848

GI number: 46446848

Start: 1445318

End: 1445653

Strand: Direct

Name: 46446848

Synonym: pc1214

Alternate gene names: NA

Gene position: 1445318-1445653 (Clockwise)

Preceding gene: 46446847

Following gene: 46446849

Centisome position: 59.86

GC content: 37.8

Gene sequence:

>336_bases
ATGAAAGGAAAAGCATTCGCAGATATAGGGTCTATTTCAGAAAAACTGACTAATACTCTAATGCAAAAGGGAATTCATCT
TTTCACAAAAGTAAAGAAGAAGATGAAACATCAATGGATCACGTTAGTGGATAAACTCATGCTAAAAAAGAGGACTATGA
TTGAAAGTGTGAATCATCTGTTGAAAAGTAGCTGTCAGATAGAACATCATCGGCGCCGAAGTCGATGGAACTTTCTTAGC
CATCTGATGGCAGGTCTTGCTAATTGTTGCTTGGAATCCATCCAAACCTCGACTGTTCTTTTTAAATACAGAAATCGAAG
CTGCTTAAGCTCCTAG

Upstream 100 bases:

>100_bases
GCTCCATCTTGTGATTAATCATCATGCAGAGATTGTCACATTTAAGTTGACAACTGGCAATATTGATGATCGCAAACCCG
TTCCAGAAATGGTAGAAGGG

Downstream 100 bases:

>100_bases
AATATTTTTGAGGATTTCTTACGTTAAACTGGCGTTTTTTTAATAGAACAAAGTCTTTTAAAGAGATTTTTGCCCCTACA
AGCATAAAAAATTGCTTATA

Product: hypothetical protein

Products: NA

Alternate protein names: ISPg3 Transposase; Transposase IS4 Family Protein; IS4 Family Transposase; Transposase And Inactivated Derivative; Membrane-Associated Metal-Dependent Hydrolase; Transposase IS4 Family

Number of amino acids: Translated: 111; Mature: 111

Protein sequence:

>111_residues
MKGKAFADIGSISEKLTNTLMQKGIHLFTKVKKKMKHQWITLVDKLMLKKRTMIESVNHLLKSSCQIEHHRRRSRWNFLS
HLMAGLANCCLESIQTSTVLFKYRNRSCLSS

Sequences:

>Translated_111_residues
MKGKAFADIGSISEKLTNTLMQKGIHLFTKVKKKMKHQWITLVDKLMLKKRTMIESVNHLLKSSCQIEHHRRRSRWNFLS
HLMAGLANCCLESIQTSTVLFKYRNRSCLSS
>Mature_111_residues
MKGKAFADIGSISEKLTNTLMQKGIHLFTKVKKKMKHQWITLVDKLMLKKRTMIESVNHLLKSSCQIEHHRRRSRWNFLS
HLMAGLANCCLESIQTSTVLFKYRNRSCLSS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12921; Mature: 12921

Theoretical pI: Translated: 11.04; Mature: 11.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.6 %Cys     (Translated Protein)
5.4 %Met     (Translated Protein)
9.0 %Cys+Met (Translated Protein)
3.6 %Cys     (Mature Protein)
5.4 %Met     (Mature Protein)
9.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKGKAFADIGSISEKLTNTLMQKGIHLFTKVKKKMKHQWITLVDKLMLKKRTMIESVNHL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LKSSCQIEHHRRRSRWNFLSHLMAGLANCCLESIQTSTVLFKYRNRSCLSS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHCCC
>Mature Secondary Structure
MKGKAFADIGSISEKLTNTLMQKGIHLFTKVKKKMKHQWITLVDKLMLKKRTMIESVNHL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LKSSCQIEHHRRRSRWNFLSHLMAGLANCCLESIQTSTVLFKYRNRSCLSS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA