| Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
|---|---|
| Accession | NC_005861 |
| Length | 2,414,465 |
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The map label for this gene is 46446848
Identifier: 46446848
GI number: 46446848
Start: 1445318
End: 1445653
Strand: Direct
Name: 46446848
Synonym: pc1214
Alternate gene names: NA
Gene position: 1445318-1445653 (Clockwise)
Preceding gene: 46446847
Following gene: 46446849
Centisome position: 59.86
GC content: 37.8
Gene sequence:
>336_bases ATGAAAGGAAAAGCATTCGCAGATATAGGGTCTATTTCAGAAAAACTGACTAATACTCTAATGCAAAAGGGAATTCATCT TTTCACAAAAGTAAAGAAGAAGATGAAACATCAATGGATCACGTTAGTGGATAAACTCATGCTAAAAAAGAGGACTATGA TTGAAAGTGTGAATCATCTGTTGAAAAGTAGCTGTCAGATAGAACATCATCGGCGCCGAAGTCGATGGAACTTTCTTAGC CATCTGATGGCAGGTCTTGCTAATTGTTGCTTGGAATCCATCCAAACCTCGACTGTTCTTTTTAAATACAGAAATCGAAG CTGCTTAAGCTCCTAG
Upstream 100 bases:
>100_bases GCTCCATCTTGTGATTAATCATCATGCAGAGATTGTCACATTTAAGTTGACAACTGGCAATATTGATGATCGCAAACCCG TTCCAGAAATGGTAGAAGGG
Downstream 100 bases:
>100_bases AATATTTTTGAGGATTTCTTACGTTAAACTGGCGTTTTTTTAATAGAACAAAGTCTTTTAAAGAGATTTTTGCCCCTACA AGCATAAAAAATTGCTTATA
Product: hypothetical protein
Products: NA
Alternate protein names: ISPg3 Transposase; Transposase IS4 Family Protein; IS4 Family Transposase; Transposase And Inactivated Derivative; Membrane-Associated Metal-Dependent Hydrolase; Transposase IS4 Family
Number of amino acids: Translated: 111; Mature: 111
Protein sequence:
>111_residues MKGKAFADIGSISEKLTNTLMQKGIHLFTKVKKKMKHQWITLVDKLMLKKRTMIESVNHLLKSSCQIEHHRRRSRWNFLS HLMAGLANCCLESIQTSTVLFKYRNRSCLSS
Sequences:
>Translated_111_residues MKGKAFADIGSISEKLTNTLMQKGIHLFTKVKKKMKHQWITLVDKLMLKKRTMIESVNHLLKSSCQIEHHRRRSRWNFLS HLMAGLANCCLESIQTSTVLFKYRNRSCLSS >Mature_111_residues MKGKAFADIGSISEKLTNTLMQKGIHLFTKVKKKMKHQWITLVDKLMLKKRTMIESVNHLLKSSCQIEHHRRRSRWNFLS HLMAGLANCCLESIQTSTVLFKYRNRSCLSS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12921; Mature: 12921
Theoretical pI: Translated: 11.04; Mature: 11.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.6 %Cys (Translated Protein) 5.4 %Met (Translated Protein) 9.0 %Cys+Met (Translated Protein) 3.6 %Cys (Mature Protein) 5.4 %Met (Mature Protein) 9.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKGKAFADIGSISEKLTNTLMQKGIHLFTKVKKKMKHQWITLVDKLMLKKRTMIESVNHL CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LKSSCQIEHHRRRSRWNFLSHLMAGLANCCLESIQTSTVLFKYRNRSCLSS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHCCC >Mature Secondary Structure MKGKAFADIGSISEKLTNTLMQKGIHLFTKVKKKMKHQWITLVDKLMLKKRTMIESVNHL CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LKSSCQIEHHRRRSRWNFLSHLMAGLANCCLESIQTSTVLFKYRNRSCLSS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA