| Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
|---|---|
| Accession | NC_005861 |
| Length | 2,414,465 |
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The map label for this gene is 46446847
Identifier: 46446847
GI number: 46446847
Start: 1444898
End: 1445164
Strand: Direct
Name: 46446847
Synonym: pc1213
Alternate gene names: NA
Gene position: 1444898-1445164 (Clockwise)
Preceding gene: 46446846
Following gene: 46446848
Centisome position: 59.84
GC content: 36.33
Gene sequence:
>267_bases GTGTTAACGGTTTTGCTTCTCTTTCATCATTCCAATGACAGAACATTTAAACACTTCTACTTAAACCATGTAAAAACAAC TTTAAAATATTTATTCCCTCATCTTGTTGGATACTCAAGATTTGTTCAACTCACCTTTGAAGCATTTTTCCCTATGTTTT GCTTGATCCAAGAACACCAAGGTATGTGTGAAGGGATTTTATTGATGGACTCTACAGTATTAACGGTTTGCCTGCGTCAA ACGTGCCTCTTCCCATCGTGTCTTTAA
Upstream 100 bases:
>100_bases ATGATTTTTCTAATCAATTTCACCAAATGTGTTCCCAAAAACAAATTGAGTAGACGAAAAGAAAAATCCGCAAAAAACTT TTAGAACATCTTTAAGTGAA
Downstream 100 bases:
>100_bases AGAGCCAAGCTAAGTGGGAAAAAAACAACCATCGGTTGGTTCTTTGGGTTTAAGCTCCATCTTGTGATTAATCATCATGC AGAGATTGTCACATTTAAGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 88; Mature: 88
Protein sequence:
>88_residues MLTVLLLFHHSNDRTFKHFYLNHVKTTLKYLFPHLVGYSRFVQLTFEAFFPMFCLIQEHQGMCEGILLMDSTVLTVCLRQ TCLFPSCL
Sequences:
>Translated_88_residues MLTVLLLFHHSNDRTFKHFYLNHVKTTLKYLFPHLVGYSRFVQLTFEAFFPMFCLIQEHQGMCEGILLMDSTVLTVCLRQ TCLFPSCL >Mature_88_residues MLTVLLLFHHSNDRTFKHFYLNHVKTTLKYLFPHLVGYSRFVQLTFEAFFPMFCLIQEHQGMCEGILLMDSTVLTVCLRQ TCLFPSCL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10377; Mature: 10377
Theoretical pI: Translated: 7.91; Mature: 7.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.7 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 10.2 %Cys+Met (Translated Protein) 5.7 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 10.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLTVLLLFHHSNDRTFKHFYLNHVKTTLKYLFPHLVGYSRFVQLTFEAFFPMFCLIQEHQ CEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GMCEGILLMDSTVLTVCLRQTCLFPSCL CHHHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MLTVLLLFHHSNDRTFKHFYLNHVKTTLKYLFPHLVGYSRFVQLTFEAFFPMFCLIQEHQ CEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GMCEGILLMDSTVLTVCLRQTCLFPSCL CHHHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA