Definition Candidatus Protochlamydia amoebophila UWE25, complete genome.
Accession NC_005861
Length 2,414,465

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The map label for this gene is 46446808

Identifier: 46446808

GI number: 46446808

Start: 1401119

End: 1401973

Strand: Direct

Name: 46446808

Synonym: pc1174

Alternate gene names: NA

Gene position: 1401119-1401973 (Clockwise)

Preceding gene: 46446806

Following gene: 46446809

Centisome position: 58.03

GC content: 31.7

Gene sequence:

>855_bases
ATGAATAGAAAGAAAATAAAAAAGCTCATTTATTTTTCTCTAGGTTGGTTAAGCTTAATAAACAGCGTCAACAGCGATAT
TATTTCTTTAGAACAAAAAAAATCTTTTTATCGTTTTCCTAAAAAAAATCCAAAGCCTCTCGGAGATACTCCTTTATCAC
ATGACGACTTCGTTAGATTATTTTTATCTCCATTTTTTATATCTCCTCATCATCTTACAGCAGTTTTTTTGAAATCATTT
GAAAAACAATTCATGGAGGGAATATGTCAACCTGATTTATTGACTACTTACGGATTTGAAATCTTAAAAAATCATTATTT
ACGTACTGTTGTTAAACACCCAGCAATCCCTGGTTACATCTTTAAAATTGCTTGCCAAGGACATATTCCTCATGAAACGC
ATTACAATGAATGGACAATGCGTATCACTGGATCGCAAACGATTGAGGCTAGTATCAAAGCATTTAATTTTGAGGATATA
TTTAGCGTACCAAAAAAATGGCTTTATCCTTTACCGAAGTCAAACTCTTTGAATGAAACCTGGTACATTTTAATTGCTGA
AGATATGTATCCACTATTTGACAAAGAAAATGTTAAACAATGGAAACAAATGGATGCTTCTACACTCGATAAAATTTTTA
AAATGGTTTGTCATTTAAAATTATGGGATACCCATTTTCAAAATTTAGTATTTACTGAAACAGGAAAATTAGCTTTTGTA
GATACCAAACATTGGGGAACGTACAAACCTTTGTTTGCAAGTAATGAGTGGTTATGGAACAGAATTTATCCTGCTTTAAA
TACAGAGATGCAAGCCTATTGGTTGTCCCTTTGGGGCATAAATTTCTCTGATTAA

Upstream 100 bases:

>100_bases
GACCATCATTCCAAATTTACTTTTACACAACTTTTTCGCCAATTTTATAAATTTCTCAAATTAGATGATGGATAAGACCA
CGTAAAAAAAAGATTTTTGA

Downstream 100 bases:

>100_bases
TAAGCTTATTTTTGACAAGGAATTTTATATGACACAAACAAACGATTCGCCATCCATTAAAGCAAAAAAGGCAGCTGCCC
TTAAAGCTGTAGAATTTGTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 284; Mature: 284

Protein sequence:

>284_residues
MNRKKIKKLIYFSLGWLSLINSVNSDIISLEQKKSFYRFPKKNPKPLGDTPLSHDDFVRLFLSPFFISPHHLTAVFLKSF
EKQFMEGICQPDLLTTYGFEILKNHYLRTVVKHPAIPGYIFKIACQGHIPHETHYNEWTMRITGSQTIEASIKAFNFEDI
FSVPKKWLYPLPKSNSLNETWYILIAEDMYPLFDKENVKQWKQMDASTLDKIFKMVCHLKLWDTHFQNLVFTETGKLAFV
DTKHWGTYKPLFASNEWLWNRIYPALNTEMQAYWLSLWGINFSD

Sequences:

>Translated_284_residues
MNRKKIKKLIYFSLGWLSLINSVNSDIISLEQKKSFYRFPKKNPKPLGDTPLSHDDFVRLFLSPFFISPHHLTAVFLKSF
EKQFMEGICQPDLLTTYGFEILKNHYLRTVVKHPAIPGYIFKIACQGHIPHETHYNEWTMRITGSQTIEASIKAFNFEDI
FSVPKKWLYPLPKSNSLNETWYILIAEDMYPLFDKENVKQWKQMDASTLDKIFKMVCHLKLWDTHFQNLVFTETGKLAFV
DTKHWGTYKPLFASNEWLWNRIYPALNTEMQAYWLSLWGINFSD
>Mature_284_residues
MNRKKIKKLIYFSLGWLSLINSVNSDIISLEQKKSFYRFPKKNPKPLGDTPLSHDDFVRLFLSPFFISPHHLTAVFLKSF
EKQFMEGICQPDLLTTYGFEILKNHYLRTVVKHPAIPGYIFKIACQGHIPHETHYNEWTMRITGSQTIEASIKAFNFEDI
FSVPKKWLYPLPKSNSLNETWYILIAEDMYPLFDKENVKQWKQMDASTLDKIFKMVCHLKLWDTHFQNLVFTETGKLAFV
DTKHWGTYKPLFASNEWLWNRIYPALNTEMQAYWLSLWGINFSD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33607; Mature: 33607

Theoretical pI: Translated: 9.32; Mature: 9.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRKKIKKLIYFSLGWLSLINSVNSDIISLEQKKSFYRFPKKNPKPLGDTPLSHDDFVRL
CCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHH
FLSPFFISPHHLTAVFLKSFEKQFMEGICQPDLLTTYGFEILKNHYLRTVVKHPAIPGYI
HHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEE
FKIACQGHIPHETHYNEWTMRITGSQTIEASIKAFNFEDIFSVPKKWLYPLPKSNSLNET
EEEEECCCCCCCCCCCCEEEEECCCCEEEHHHEECCHHHHHHCCHHHCCCCCCCCCCCCE
WYILIAEDMYPLFDKENVKQWKQMDASTLDKIFKMVCHLKLWDTHFQNLVFTETGKLAFV
EEEEEECCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCEEEE
DTKHWGTYKPLFASNEWLWNRIYPALNTEMQAYWLSLWGINFSD
ECCCCCCCCCCCCCCCHHHHHHCHHHCCHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MNRKKIKKLIYFSLGWLSLINSVNSDIISLEQKKSFYRFPKKNPKPLGDTPLSHDDFVRL
CCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHH
FLSPFFISPHHLTAVFLKSFEKQFMEGICQPDLLTTYGFEILKNHYLRTVVKHPAIPGYI
HHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEE
FKIACQGHIPHETHYNEWTMRITGSQTIEASIKAFNFEDIFSVPKKWLYPLPKSNSLNET
EEEEECCCCCCCCCCCCEEEEECCCCEEEHHHEECCHHHHHHCCHHHCCCCCCCCCCCCE
WYILIAEDMYPLFDKENVKQWKQMDASTLDKIFKMVCHLKLWDTHFQNLVFTETGKLAFV
EEEEEECCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCEEEE
DTKHWGTYKPLFASNEWLWNRIYPALNTEMQAYWLSLWGINFSD
ECCCCCCCCCCCCCCCHHHHHHCHHHCCHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA