Definition Candidatus Protochlamydia amoebophila UWE25, complete genome.
Accession NC_005861
Length 2,414,465

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The map label for this gene is 46446788

Identifier: 46446788

GI number: 46446788

Start: 1383411

End: 1384520

Strand: Reverse

Name: 46446788

Synonym: pc1154

Alternate gene names: NA

Gene position: 1384520-1383411 (Counterclockwise)

Preceding gene: 46446789

Following gene: 46446787

Centisome position: 57.34

GC content: 34.68

Gene sequence:

>1110_bases
TTGAAATTTGATTTAGAAAACTCCTTATCTCGTTTAATTGACTATGGTAAAACTGTACATCAAAAAAATCCTTTCCCTTA
TTCCATTGCCGTAAGATTAGCTGCAGGATTAATGGCCGTTGGAAAATTATTGAATCGACAAGATTGGCAAGAAGAGGGAA
TTGATTTATGGAAACAACTTGCTCGCCCATCTATCAGTTGGTATGCAACAACTTATTTATCTGATCTGTTGATTTCTCAT
CAGATGGTGGTAGGTCAAGAAATTAAAGACTGGGAATTATTTTGGACTTATCTCAAACAAACATGGAATTCGCAGTTGTG
TTGTTATACAGGTCCTCATGTGAGAGAATGGCAAAACAAAGATGAGCCTTTAAATTATTTTTATAATCTTATCATGAAAT
GCTGGTTTTCTCTTGAATTTCCTCGCTTTAAATCGCATGAAATAATTCATTTAGAAGCCGTTTTAATCCACAGTCCGTTT
TCAGAAGATTTAAAATTAATCCAGAATGACTCTTTTTATCAACTAGATGGAGTTTATAAAGGTCAAAAATGGTTATTAAA
TAAAGCTTATGAACACACTTGGGTAGCTCTCGAAAAGAAAGTATCTGCTGGTTTGATGGGAGAAAAAACATTTACTCCAT
TTTGCTTTTTTACTGGCCAAAACTTCCTCCATACTTTTGTTTGTCAAGGAGGAAGATTTTCTCAGTTAGAATTTAAAATG
TTATCTTCTCATTCTTTGGAGTTTTTATTTCATTTTAATGATGCAGGGGATAAAGAAGATCGGGACAAAACGAGAGATAT
TTGTTTTTATTGGAATGATCATGCCGAGTGGCAAGTTCGAGTCAATAATCAGCAATCTAATACTTTTGAGCTTGGCCAAA
CTATCCAATGGAGTTGTCAATCTCGCCCAGCTTTTACGATGGTATTTGAGCTTTTGGAGGGGAAAGGGCAATTTTTAGGA
CATTTAGCAAAAGGAAATCGACCTTCACAATTTAAATTAATTAGTGAAGAAAAGCATTGCCAAGCTTACGACCGTATCTT
ATTTATTCGTACAATTAGACGGACAGGCCCTTCCACATTGAGAGCAGTTTTGCATTTTTCTCAAAGTTAA

Upstream 100 bases:

>100_bases
ACATCAGTATCCTATTTGCCATCATAGTGAAACTGGAATTTCGTTAATAGCTCCCTTTTATTGGATCTTAAAAAATTTCG
GACATGTTTTAGGGCAAGAA

Downstream 100 bases:

>100_bases
GCTATGGATTTTAAAGTTCGAAGTTATTTTTTATCTTTGATAATCATCTGTATTCTTTCAACTCTAACAAGCTGTTGCCC
CTCTTCTAGTGCTTACAGAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 369; Mature: 369

Protein sequence:

>369_residues
MKFDLENSLSRLIDYGKTVHQKNPFPYSIAVRLAAGLMAVGKLLNRQDWQEEGIDLWKQLARPSISWYATTYLSDLLISH
QMVVGQEIKDWELFWTYLKQTWNSQLCCYTGPHVREWQNKDEPLNYFYNLIMKCWFSLEFPRFKSHEIIHLEAVLIHSPF
SEDLKLIQNDSFYQLDGVYKGQKWLLNKAYEHTWVALEKKVSAGLMGEKTFTPFCFFTGQNFLHTFVCQGGRFSQLEFKM
LSSHSLEFLFHFNDAGDKEDRDKTRDICFYWNDHAEWQVRVNNQQSNTFELGQTIQWSCQSRPAFTMVFELLEGKGQFLG
HLAKGNRPSQFKLISEEKHCQAYDRILFIRTIRRTGPSTLRAVLHFSQS

Sequences:

>Translated_369_residues
MKFDLENSLSRLIDYGKTVHQKNPFPYSIAVRLAAGLMAVGKLLNRQDWQEEGIDLWKQLARPSISWYATTYLSDLLISH
QMVVGQEIKDWELFWTYLKQTWNSQLCCYTGPHVREWQNKDEPLNYFYNLIMKCWFSLEFPRFKSHEIIHLEAVLIHSPF
SEDLKLIQNDSFYQLDGVYKGQKWLLNKAYEHTWVALEKKVSAGLMGEKTFTPFCFFTGQNFLHTFVCQGGRFSQLEFKM
LSSHSLEFLFHFNDAGDKEDRDKTRDICFYWNDHAEWQVRVNNQQSNTFELGQTIQWSCQSRPAFTMVFELLEGKGQFLG
HLAKGNRPSQFKLISEEKHCQAYDRILFIRTIRRTGPSTLRAVLHFSQS
>Mature_369_residues
MKFDLENSLSRLIDYGKTVHQKNPFPYSIAVRLAAGLMAVGKLLNRQDWQEEGIDLWKQLARPSISWYATTYLSDLLISH
QMVVGQEIKDWELFWTYLKQTWNSQLCCYTGPHVREWQNKDEPLNYFYNLIMKCWFSLEFPRFKSHEIIHLEAVLIHSPF
SEDLKLIQNDSFYQLDGVYKGQKWLLNKAYEHTWVALEKKVSAGLMGEKTFTPFCFFTGQNFLHTFVCQGGRFSQLEFKM
LSSHSLEFLFHFNDAGDKEDRDKTRDICFYWNDHAEWQVRVNNQQSNTFELGQTIQWSCQSRPAFTMVFELLEGKGQFLG
HLAKGNRPSQFKLISEEKHCQAYDRILFIRTIRRTGPSTLRAVLHFSQS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 43512; Mature: 43512

Theoretical pI: Translated: 7.83; Mature: 7.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKFDLENSLSRLIDYGKTVHQKNPFPYSIAVRLAAGLMAVGKLLNRQDWQEEGIDLWKQL
CCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
ARPSISWYATTYLSDLLISHQMVVGQEIKDWELFWTYLKQTWNSQLCCYTGPHVREWQNK
CCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCEEEECCCCHHHHCCC
DEPLNYFYNLIMKCWFSLEFPRFKSHEIIHLEAVLIHSPFSEDLKLIQNDSFYQLDGVYK
CCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEEEECCCHHHHHHHCCCCEEEECCEEC
GQKWLLNKAYEHTWVALEKKVSAGLMGEKTFTPFCFFTGQNFLHTFVCQGGRFSQLEFKM
CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCHHHHHHHHCCCCCCHHHHHH
LSSHSLEFLFHFNDAGDKEDRDKTRDICFYWNDHAEWQVRVNNQQSNTFELGQTIQWSCQ
HCCCCEEEEEEECCCCCCCCCCCCCCEEEEECCCCEEEEEECCCCCCCEECCCCEEECCC
SRPAFTMVFELLEGKGQFLGHLAKGNRPSQFKLISEEKHCQAYDRILFIRTIRRTGPSTL
CCCHHHHHHHHHHCCCHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHCCHHHH
RAVLHFSQS
HHHHHHCCC
>Mature Secondary Structure
MKFDLENSLSRLIDYGKTVHQKNPFPYSIAVRLAAGLMAVGKLLNRQDWQEEGIDLWKQL
CCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
ARPSISWYATTYLSDLLISHQMVVGQEIKDWELFWTYLKQTWNSQLCCYTGPHVREWQNK
CCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCEEEECCCCHHHHCCC
DEPLNYFYNLIMKCWFSLEFPRFKSHEIIHLEAVLIHSPFSEDLKLIQNDSFYQLDGVYK
CCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEEEECCCHHHHHHHCCCCEEEECCEEC
GQKWLLNKAYEHTWVALEKKVSAGLMGEKTFTPFCFFTGQNFLHTFVCQGGRFSQLEFKM
CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCHHHHHHHHCCCCCCHHHHHH
LSSHSLEFLFHFNDAGDKEDRDKTRDICFYWNDHAEWQVRVNNQQSNTFELGQTIQWSCQ
HCCCCEEEEEEECCCCCCCCCCCCCCEEEEECCCCEEEEEECCCCCCCEECCCCEEECCC
SRPAFTMVFELLEGKGQFLGHLAKGNRPSQFKLISEEKHCQAYDRILFIRTIRRTGPSTL
CCCHHHHHHHHHHCCCHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHCCHHHH
RAVLHFSQS
HHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA