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The map label for this gene is yciF [H]

Identifier: 46446781

GI number: 46446781

Start: 1377330

End: 1377872

Strand: Direct

Name: yciF [H]

Synonym: pc1147

Alternate gene names: 46446781

Gene position: 1377330-1377872 (Clockwise)

Preceding gene: 46446780

Following gene: 46446782

Centisome position: 57.04

GC content: 33.89

Gene sequence:

>543_bases
ATGAGAAATTCTTTATTTGAAGTCTTTACGACTGTATTAAGAGACCTCTTTGATGTTGAAAATCAACTTATCGCCTTATT
ACCTAAAATGATCAAAGAGTCTCTACATCCTGAATTAAAATCAGCCTTAACAACACATCTTAATGAAACTCAAAATCAAA
AGAAAAGGCTTCAGTTTATTTTAGAATCTTTGAATGCAAATACCTCAGAAAGGATTTGTAAATCTATGCGGGAGCTAATA
AATGAGGTCGAAGAAATTATCACTCGTTTTCCTACTCCCTCTTCATTAAAAGATGTTTATTTAATTATTCTTTGCCAAAA
AATAAAGCACTATGAAATCGCAAGTTATGGCTCCGCACGAGCCCTTGCTAGACATCTAAGTAACTTTTCTACCGAGCAAA
TCGACTTTAAAGAAATTGCGGATACTTTACAATACTCTTTAGATGAAGAAACTCGCTTTGATGAAACGTTGATTGATCTC
GCTGAAGGCGGTTTTTTCAGCCGCGGAATTAATGATGAAGCAGAATTAGAATCTACTCAATAA

Upstream 100 bases:

>100_bases
AATTAGTATAGGAATAATAAGCATATAAATTATTTAAATATTTTTTTTAATCATTTAAATATTAGGATGATAAACTCCAA
TCCTTGATAAGGAGAGAGTC

Downstream 100 bases:

>100_bases
TTGTATTTTTTAAACATGTCCATCTATTTTTAATCAGAGGTATAAAATGACTCGAATCAGCCCTATTACAAAAGAAGAAG
CTAATCAAAACATTACCCAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 180; Mature: 180

Protein sequence:

>180_residues
MRNSLFEVFTTVLRDLFDVENQLIALLPKMIKESLHPELKSALTTHLNETQNQKKRLQFILESLNANTSERICKSMRELI
NEVEEIITRFPTPSSLKDVYLIILCQKIKHYEIASYGSARALARHLSNFSTEQIDFKEIADTLQYSLDEETRFDETLIDL
AEGGFFSRGINDEAELESTQ

Sequences:

>Translated_180_residues
MRNSLFEVFTTVLRDLFDVENQLIALLPKMIKESLHPELKSALTTHLNETQNQKKRLQFILESLNANTSERICKSMRELI
NEVEEIITRFPTPSSLKDVYLIILCQKIKHYEIASYGSARALARHLSNFSTEQIDFKEIADTLQYSLDEETRFDETLIDL
AEGGFFSRGINDEAELESTQ
>Mature_180_residues
MRNSLFEVFTTVLRDLFDVENQLIALLPKMIKESLHPELKSALTTHLNETQNQKKRLQFILESLNANTSERICKSMRELI
NEVEEIITRFPTPSSLKDVYLIILCQKIKHYEIASYGSARALARHLSNFSTEQIDFKEIADTLQYSLDEETRFDETLIDL
AEGGFFSRGINDEAELESTQ

Specific function: Unknown

COG id: COG3685

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787512, Length=156, Percent_Identity=34.6153846153846, Blast_Score=81, Evalue=4e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010287
- InterPro:   IPR012347
- InterPro:   IPR009078 [H]

Pfam domain/function: PF05974 DUF892 [H]

EC number: NA

Molecular weight: Translated: 20791; Mature: 20791

Theoretical pI: Translated: 4.65; Mature: 4.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRNSLFEVFTTVLRDLFDVENQLIALLPKMIKESLHPELKSALTTHLNETQNQKKRLQFI
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHH
LESLNANTSERICKSMRELINEVEEIITRFPTPSSLKDVYLIILCQKIKHYEIASYGSAR
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHH
ALARHLSNFSTEQIDFKEIADTLQYSLDEETRFDETLIDLAEGGFFSRGINDEAELESTQ
HHHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHCCCCCHHHCCCCC
>Mature Secondary Structure
MRNSLFEVFTTVLRDLFDVENQLIALLPKMIKESLHPELKSALTTHLNETQNQKKRLQFI
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHH
LESLNANTSERICKSMRELINEVEEIITRFPTPSSLKDVYLIILCQKIKHYEIASYGSAR
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHH
ALARHLSNFSTEQIDFKEIADTLQYSLDEETRFDETLIDLAEGGFFSRGINDEAELESTQ
HHHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHCCCCCHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 3058546; 9097039; 9278503; 8455549 [H]