Definition Candidatus Protochlamydia amoebophila UWE25, complete genome.
Accession NC_005861
Length 2,414,465

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The map label for this gene is 46446776

Identifier: 46446776

GI number: 46446776

Start: 1372384

End: 1374156

Strand: Direct

Name: 46446776

Synonym: pc1142

Alternate gene names: NA

Gene position: 1372384-1374156 (Clockwise)

Preceding gene: 46446775

Following gene: 46446778

Centisome position: 56.84

GC content: 38.69

Gene sequence:

>1773_bases
TTGAATATTTCTAATTTTGGGTTTAACCCTAGTCTTCTTGCCAATACAGCGATTCCATCTTACTATCCCCCTCAAGACAT
TAATGATCAACTTGAGAATGAAAATACTCCCTTAGACAATCCTTTACCTAATCTAGAAGAAACTAATGCACCAACGATTC
CAACTCCTGCTCTTTCACCTTCATCTGAACAAGTTCAACTAAGCTTTCAAGAGGGAACTTCTCTAACTATTTCTCATTCT
CAGCTAGCTTTGTTAAAGGAAAAATCACACTACTTTAACAATCTGTGGTCGGGGCAATTTCAAGAAACCCTGCAACATCC
TTTGGCTTTGACACAAAAAGACTTTACGCTTTTGCTTAATTGCCTAACGAATCCTAAGTTTGAAATTTCCTTGGAAGAGA
TCTCTTCTTCTATTCAATTCGCCGATTATTATGGACTGACAGAAGTGGTGAAAAATTTAGAAGAACAGCTAATAGATGGA
TATAAATCTCAGAGATTTGAATCCTTTAACTCCACTGAAGAGAGCTTAGTCGAATTAAAAGAACTTTTAAATTTTGCACA
TCGCTATCAATTAAATATTTTGAGGAATTATTTAGAGTTCACCGTTGTGAGCGCCTTATTAAACCAGACCATTCAGTTAT
CGGAGTTTGAAAGAATTATAAATCATTTGTCAAATAAGATAGAAGCACTCAATTTTTTGGAGAATACTCATTTAACAAAT
GCTCACCTTTTAGCATTAAAAGATTGTAAAAATGTAAAAGTTCTTTATTTTAAGAAATGTCGGGATGTCACTGATGCAGG
GTTAGCCCATTTGACACCCTTAACGGCTTTGCAGCATCTAGGTTTAAGCGATTGCGAAAATCTCACTGATGCAGGGTTAG
CCCATTTGACAACCTTAACGGCTTTGCAGCATCTAGATCTAAGCGGATGCTGGAATCTCACCGATTCAGGATTAGTCCAT
TTGACACCTTTAGTGGGTTTGCAGCATCTAGGTTTAAGCGATTGCGAGAATCTCACCGTTGCAGGATTAGCGCATTTGAC
ATCTTTAACGGCTTTGCAACATCTAGATCTAAGGAATTGCTATAACCTTACCGATGCAGGATTGGCGCATTTAACACCCT
TAACAGCTTTGCAGCATCTAGATTTAAGCTGTTGCTATAACCTTACTGATGCTGGATTAGCCCATTTGACACCCTTAACA
GCTTTGCAGCATCTAAATCTATGCTGCTGTAGAAAACTTACCGATGCAGGATTGGCGCATTTAACACCCTTAACAGCTTT
GCAGCATCTAGATTTAAGCTATTGCTATAACCTTACTGATGCAGGATTAGCCCATTTGACACCCTTAACAGCTTTGCTGC
ATCTAAATCTAAGCGAATGCTGGAAACTTACTGGTGCAGGATTAGCGCATTTAACACCTTTAGTGGCTTTGCAACATCTA
AATCTAAGCAAGTGCAATAACCTCACCGATGCAGGATTAGTTCATTTGGCACCTTTAACCGCTTTGCAGCATCTAAATCT
AAGCTGGTGCAAGAAATTCACCGATGCAGGGTTAGCCCATTTAACACTCTTAACGGCTTTGCAATCTCTAGATCTAATTG
GCTGTAATAACCTCACCGATGCAGGATTAGTCCATTTGACACCCTTAACGGCTTTGCAATATCTAGATCTAATTGGCTGT
AAGAATCTCACCGATGCAGGATTAGAACGTTTTAAAACTTTAGCAGCTTTACCCAATCTAACAATAAAACTAGAAACCGG
GCGTCGAAAATAA

Upstream 100 bases:

>100_bases
CCTATTTTAACTTATTAATATTGCAATAATTTTTATCTATCCATCATATTGTTAAAACATCTATAAATTAAAATTTATTT
CACTTACTTGGATGGTCATT

Downstream 100 bases:

>100_bases
AAGAGTACTTTGTCCTAAAAAGATAGTAGATATAAGAATAAAATTTCATTAAAGTTGATCGACTTTCAACAAGGCGCTTC
TCTAAGAGAAATATTCGCTA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 590; Mature: 590

Protein sequence:

>590_residues
MNISNFGFNPSLLANTAIPSYYPPQDINDQLENENTPLDNPLPNLEETNAPTIPTPALSPSSEQVQLSFQEGTSLTISHS
QLALLKEKSHYFNNLWSGQFQETLQHPLALTQKDFTLLLNCLTNPKFEISLEEISSSIQFADYYGLTEVVKNLEEQLIDG
YKSQRFESFNSTEESLVELKELLNFAHRYQLNILRNYLEFTVVSALLNQTIQLSEFERIINHLSNKIEALNFLENTHLTN
AHLLALKDCKNVKVLYFKKCRDVTDAGLAHLTPLTALQHLGLSDCENLTDAGLAHLTTLTALQHLDLSGCWNLTDSGLVH
LTPLVGLQHLGLSDCENLTVAGLAHLTSLTALQHLDLRNCYNLTDAGLAHLTPLTALQHLDLSCCYNLTDAGLAHLTPLT
ALQHLNLCCCRKLTDAGLAHLTPLTALQHLDLSYCYNLTDAGLAHLTPLTALLHLNLSECWKLTGAGLAHLTPLVALQHL
NLSKCNNLTDAGLVHLAPLTALQHLNLSWCKKFTDAGLAHLTLLTALQSLDLIGCNNLTDAGLVHLTPLTALQYLDLIGC
KNLTDAGLERFKTLAALPNLTIKLETGRRK

Sequences:

>Translated_590_residues
MNISNFGFNPSLLANTAIPSYYPPQDINDQLENENTPLDNPLPNLEETNAPTIPTPALSPSSEQVQLSFQEGTSLTISHS
QLALLKEKSHYFNNLWSGQFQETLQHPLALTQKDFTLLLNCLTNPKFEISLEEISSSIQFADYYGLTEVVKNLEEQLIDG
YKSQRFESFNSTEESLVELKELLNFAHRYQLNILRNYLEFTVVSALLNQTIQLSEFERIINHLSNKIEALNFLENTHLTN
AHLLALKDCKNVKVLYFKKCRDVTDAGLAHLTPLTALQHLGLSDCENLTDAGLAHLTTLTALQHLDLSGCWNLTDSGLVH
LTPLVGLQHLGLSDCENLTVAGLAHLTSLTALQHLDLRNCYNLTDAGLAHLTPLTALQHLDLSCCYNLTDAGLAHLTPLT
ALQHLNLCCCRKLTDAGLAHLTPLTALQHLDLSYCYNLTDAGLAHLTPLTALLHLNLSECWKLTGAGLAHLTPLVALQHL
NLSKCNNLTDAGLVHLAPLTALQHLNLSWCKKFTDAGLAHLTLLTALQSLDLIGCNNLTDAGLVHLTPLTALQYLDLIGC
KNLTDAGLERFKTLAALPNLTIKLETGRRK
>Mature_590_residues
MNISNFGFNPSLLANTAIPSYYPPQDINDQLENENTPLDNPLPNLEETNAPTIPTPALSPSSEQVQLSFQEGTSLTISHS
QLALLKEKSHYFNNLWSGQFQETLQHPLALTQKDFTLLLNCLTNPKFEISLEEISSSIQFADYYGLTEVVKNLEEQLIDG
YKSQRFESFNSTEESLVELKELLNFAHRYQLNILRNYLEFTVVSALLNQTIQLSEFERIINHLSNKIEALNFLENTHLTN
AHLLALKDCKNVKVLYFKKCRDVTDAGLAHLTPLTALQHLGLSDCENLTDAGLAHLTTLTALQHLDLSGCWNLTDSGLVH
LTPLVGLQHLGLSDCENLTVAGLAHLTSLTALQHLDLRNCYNLTDAGLAHLTPLTALQHLDLSCCYNLTDAGLAHLTPLT
ALQHLNLCCCRKLTDAGLAHLTPLTALQHLDLSYCYNLTDAGLAHLTPLTALLHLNLSECWKLTGAGLAHLTPLVALQHL
NLSKCNNLTDAGLVHLAPLTALQHLNLSWCKKFTDAGLAHLTLLTALQSLDLIGCNNLTDAGLVHLTPLTALQYLDLIGC
KNLTDAGLERFKTLAALPNLTIKLETGRRK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI22748931, Length=367, Percent_Identity=33.5149863760218, Blast_Score=146, Evalue=5e-35,
Organism=Homo sapiens, GI161333852, Length=453, Percent_Identity=27.5938189845475, Blast_Score=110, Evalue=5e-24,
Organism=Homo sapiens, GI284447308, Length=343, Percent_Identity=31.4868804664723, Blast_Score=109, Evalue=9e-24,
Organism=Homo sapiens, GI161333854, Length=453, Percent_Identity=25.3863134657837, Blast_Score=103, Evalue=4e-22,
Organism=Homo sapiens, GI6912466, Length=291, Percent_Identity=31.2714776632302, Blast_Score=102, Evalue=8e-22,
Organism=Homo sapiens, GI27734755, Length=448, Percent_Identity=27.4553571428571, Blast_Score=102, Evalue=8e-22,
Organism=Homo sapiens, GI289666746, Length=243, Percent_Identity=35.3909465020576, Blast_Score=89, Evalue=8e-18,
Organism=Homo sapiens, GI296531375, Length=398, Percent_Identity=27.3869346733668, Blast_Score=89, Evalue=1e-17,
Organism=Homo sapiens, GI284447314, Length=251, Percent_Identity=33.0677290836653, Blast_Score=87, Evalue=3e-17,
Organism=Caenorhabditis elegans, GI25151694, Length=353, Percent_Identity=30.028328611898, Blast_Score=96, Evalue=5e-20,
Organism=Caenorhabditis elegans, GI25151696, Length=353, Percent_Identity=30.028328611898, Blast_Score=95, Evalue=1e-19,
Organism=Saccharomyces cerevisiae, GI6322549, Length=192, Percent_Identity=34.8958333333333, Blast_Score=96, Evalue=1e-20,
Organism=Drosophila melanogaster, GI17647819, Length=348, Percent_Identity=34.1954022988506, Blast_Score=146, Evalue=4e-35,
Organism=Drosophila melanogaster, GI24662818, Length=287, Percent_Identity=33.7979094076655, Blast_Score=101, Evalue=2e-21,
Organism=Drosophila melanogaster, GI21357913, Length=275, Percent_Identity=33.0909090909091, Blast_Score=93, Evalue=4e-19,
Organism=Drosophila melanogaster, GI161076545, Length=356, Percent_Identity=28.0898876404494, Blast_Score=80, Evalue=5e-15,
Organism=Drosophila melanogaster, GI24652783, Length=348, Percent_Identity=27.5862068965517, Blast_Score=79, Evalue=7e-15,
Organism=Drosophila melanogaster, GI161076547, Length=348, Percent_Identity=27.5862068965517, Blast_Score=79, Evalue=8e-15,
Organism=Drosophila melanogaster, GI161076549, Length=348, Percent_Identity=27.5862068965517, Blast_Score=79, Evalue=1e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 65041; Mature: 65041

Theoretical pI: Translated: 5.89; Mature: 5.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.1 %Cys     (Translated Protein)
0.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
3.1 %Cys     (Mature Protein)
0.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNISNFGFNPSLLANTAIPSYYPPQDINDQLENENTPLDNPLPNLEETNAPTIPTPALSP
CCCCCCCCCHHHHHHCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
SSEQVQLSFQEGTSLTISHSQLALLKEKSHYFNNLWSGQFQETLQHPLALTQKDFTLLLN
CCCEEEEEECCCCEEEEEHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHH
CLTNPKFEISLEEISSSIQFADYYGLTEVVKNLEEQLIDGYKSQRFESFNSTEESLVELK
HHCCCCEEEEHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
ELLNFAHRYQLNILRNYLEFTVVSALLNQTIQLSEFERIINHLSNKIEALNFLENTHLTN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
AHLLALKDCKNVKVLYFKKCRDVTDAGLAHLTPLTALQHLGLSDCENLTDAGLAHLTTLT
EEEEEECCCCCCEEEEEHHHCCHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
ALQHLDLSGCWNLTDSGLVHLTPLVGLQHLGLSDCENLTVAGLAHLTSLTALQHLDLRNC
HHHHCCCCCCCCCCCCCCEEEHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
YNLTDAGLAHLTPLTALQHLDLSCCYNLTDAGLAHLTPLTALQHLNLCCCRKLTDAGLAH
CCCCCCCHHHHHHHHHHHHCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHH
LTPLTALQHLDLSYCYNLTDAGLAHLTPLTALLHLNLSECWKLTGAGLAHLTPLVALQHL
HHHHHHHHHCCHHHHHCCCCCCHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHC
NLSKCNNLTDAGLVHLAPLTALQHLNLSWCKKFTDAGLAHLTLLTALQSLDLIGCNNLTD
CHHHHCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHCHHHHHHHHHHHHHHCCCCCCCCCC
AGLVHLTPLTALQYLDLIGCKNLTDAGLERFKTLAALPNLTIKLETGRRK
CCEEEECHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCC
>Mature Secondary Structure
MNISNFGFNPSLLANTAIPSYYPPQDINDQLENENTPLDNPLPNLEETNAPTIPTPALSP
CCCCCCCCCHHHHHHCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
SSEQVQLSFQEGTSLTISHSQLALLKEKSHYFNNLWSGQFQETLQHPLALTQKDFTLLLN
CCCEEEEEECCCCEEEEEHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHH
CLTNPKFEISLEEISSSIQFADYYGLTEVVKNLEEQLIDGYKSQRFESFNSTEESLVELK
HHCCCCEEEEHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
ELLNFAHRYQLNILRNYLEFTVVSALLNQTIQLSEFERIINHLSNKIEALNFLENTHLTN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
AHLLALKDCKNVKVLYFKKCRDVTDAGLAHLTPLTALQHLGLSDCENLTDAGLAHLTTLT
EEEEEECCCCCCEEEEEHHHCCHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
ALQHLDLSGCWNLTDSGLVHLTPLVGLQHLGLSDCENLTVAGLAHLTSLTALQHLDLRNC
HHHHCCCCCCCCCCCCCCEEEHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
YNLTDAGLAHLTPLTALQHLDLSCCYNLTDAGLAHLTPLTALQHLNLCCCRKLTDAGLAH
CCCCCCCHHHHHHHHHHHHCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHH
LTPLTALQHLDLSYCYNLTDAGLAHLTPLTALLHLNLSECWKLTGAGLAHLTPLVALQHL
HHHHHHHHHCCHHHHHCCCCCCHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHC
NLSKCNNLTDAGLVHLAPLTALQHLNLSWCKKFTDAGLAHLTLLTALQSLDLIGCNNLTD
CHHHHCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHCHHHHHHHHHHHHHHCCCCCCCCCC
AGLVHLTPLTALQYLDLIGCKNLTDAGLERFKTLAALPNLTIKLETGRRK
CCEEEECHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA