Definition Candidatus Protochlamydia amoebophila UWE25, complete genome.
Accession NC_005861
Length 2,414,465

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The map label for this gene is 46446775

Identifier: 46446775

GI number: 46446775

Start: 1371075

End: 1371659

Strand: Direct

Name: 46446775

Synonym: pc1141

Alternate gene names: NA

Gene position: 1371075-1371659 (Clockwise)

Preceding gene: 46446774

Following gene: 46446776

Centisome position: 56.79

GC content: 33.85

Gene sequence:

>585_bases
TTGCTTTACCCAAGAACACCAAAGGTAATTGACAGAAGTGGCGAAGAATTTAGGAAAACAGCTGATAGATGGGTACAAAA
AATACAGAAATTTGAACCCTTTAATTCCACTGAAGAGAGCTTAATCGAATTAAAAGAACTTTTAAATTTTGCACATCGCT
GTCAATTAAATACATTGAAGAATTATTTAGAATTCACCGTTGTGAGCGAATTATTAAACCAGACTTCTCTGTTAACGGAA
TTTGAAAAAATTTTAAAGCACTTCTCAAATGAGATAGAAGCACTCAATTTTTCGGAGAATACTTATTTAACAGATGCCCA
TCTTTTAGCATTAAAAGGTTGTAAAAATTTAAAAATACTTCATTTAGAGAAATGTTGGGATCTCACCGATGATGGATTAG
CGCATTTAACACCCTTAACGTCTTTGCAGCATCTAGATTTAAGCTCTTGTAAGAAACTCACTGATAAGGGATTAGCCCAT
TTGACAACCTTAACGATTTTACAGCGTTTAGATTTGAGCTATTGTGAGAATCTCACTAAGGATGGATTAGCCTATTTGAC
AACTTTAACAGGTTTGCAGGGTTAG

Upstream 100 bases:

>100_bases
ACTTAAACCCTGTAAAAACAACTTTAAAATATTTATTCCTTCATCTTGTTGGGTACTCAACTTTTGTTCAACTCACCTCT
GAAGCATTTTTTCCTATGTT

Downstream 100 bases:

>100_bases
CGCATTTAACACCCTTAATTGCTTTACAACATTTAGAGCTGATAACGGTTTGCAGTATCTAGATCTAAGCCATTGCTGGA
ATCTCACTGATGCAGGATTA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 194; Mature: 194

Protein sequence:

>194_residues
MLYPRTPKVIDRSGEEFRKTADRWVQKIQKFEPFNSTEESLIELKELLNFAHRCQLNTLKNYLEFTVVSELLNQTSLLTE
FEKILKHFSNEIEALNFSENTYLTDAHLLALKGCKNLKILHLEKCWDLTDDGLAHLTPLTSLQHLDLSSCKKLTDKGLAH
LTTLTILQRLDLSYCENLTKDGLAYLTTLTGLQG

Sequences:

>Translated_194_residues
MLYPRTPKVIDRSGEEFRKTADRWVQKIQKFEPFNSTEESLIELKELLNFAHRCQLNTLKNYLEFTVVSELLNQTSLLTE
FEKILKHFSNEIEALNFSENTYLTDAHLLALKGCKNLKILHLEKCWDLTDDGLAHLTPLTSLQHLDLSSCKKLTDKGLAH
LTTLTILQRLDLSYCENLTKDGLAYLTTLTGLQG
>Mature_194_residues
MLYPRTPKVIDRSGEEFRKTADRWVQKIQKFEPFNSTEESLIELKELLNFAHRCQLNTLKNYLEFTVVSELLNQTSLLTE
FEKILKHFSNEIEALNFSENTYLTDAHLLALKGCKNLKILHLEKCWDLTDDGLAHLTPLTSLQHLDLSSCKKLTDKGLAH
LTTLTILQRLDLSYCENLTKDGLAYLTTLTGLQG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Drosophila melanogaster, GI17647819, Length=125, Percent_Identity=32, Blast_Score=64, Evalue=6e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22285; Mature: 22285

Theoretical pI: Translated: 6.39; Mature: 6.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLYPRTPKVIDRSGEEFRKTADRWVQKIQKFEPFNSTEESLIELKELLNFAHRCQLNTLK
CCCCCCCHHHCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
NYLEFTVVSELLNQTSLLTEFEKILKHFSNEIEALNFSENTYLTDAHLLALKGCKNLKIL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEHHHHHHHHHCCCCCEEE
HLEKCWDLTDDGLAHLTPLTSLQHLDLSSCKKLTDKGLAHLTTLTILQRLDLSYCENLTK
EHHHHCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DGLAYLTTLTGLQG
HHHHHHHHHHCCCC
>Mature Secondary Structure
MLYPRTPKVIDRSGEEFRKTADRWVQKIQKFEPFNSTEESLIELKELLNFAHRCQLNTLK
CCCCCCCHHHCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
NYLEFTVVSELLNQTSLLTEFEKILKHFSNEIEALNFSENTYLTDAHLLALKGCKNLKIL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEHHHHHHHHHCCCCCEEE
HLEKCWDLTDDGLAHLTPLTSLQHLDLSSCKKLTDKGLAHLTTLTILQRLDLSYCENLTK
EHHHHCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DGLAYLTTLTGLQG
HHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA