| Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
|---|---|
| Accession | NC_005861 |
| Length | 2,414,465 |
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The map label for this gene is fusA [H]
Identifier: 46446750
GI number: 46446750
Start: 1336275
End: 1338095
Strand: Direct
Name: fusA [H]
Synonym: pc1116
Alternate gene names: 46446750
Gene position: 1336275-1338095 (Clockwise)
Preceding gene: 46446748
Following gene: 46446754
Centisome position: 55.34
GC content: 39.54
Gene sequence:
>1821_bases ATGTATTCTCCTGAAAAAATCCGTAATATTGCGATCATTGCGCACATTGACCACGGTAAAACAACATTGTTAGATGCTTT GCTTAAACAGTCTAAAATTTTTCGCGATAATCAACAAGTTCGCGAACGCGTTATGGACTCATATGATCAAGAACAAGAAC GTGGAATTACTATTTTTGCTAAACATACGTCTGTTTACTTTGATGATTTCAAAATTAATATTATTGACACTCCAGGACAC GCTGATTTCTCAGGTGAAGTCGAACGTATTTTAGGAATGGTAGATTCAGTCCTACTACTTGTAGATGCCCAAGAGGGACC GATGCCTCAAACCCGCTTTGTTCTTTCTAAATCATTAAAAATGGGCATTAAACCTATTGTCGTCTTAAATAAAATTGACC GACCTCATGCCAACCCAGATAGAGTATTAGACTTAACATTTGATCTATTTAGTGAACTTGGTGCAACAGATGAACAACTT GATTTCCGCTATTGCTATGCATCAGGGTTATCAGGATTTGCGATGCACCACATGCACGATACACATAAAGATATGCGTCC TTTATTTGAACTTATTACTTACGCCGTACAACAGCCTAAAGGTAGCCTCGAAAATCCTTTCTTAATGCATGTATCTACAA TTACTTATGATGATTATGTTGGCCGTCAAGCTTGTGGAAAAATTTTAGAAGGGACTGTCAAAAAAGGACAGCAGCTCATT CATATCGATGAAAATGGGGTGGAAACCAAATGCACAATTACCCGTATTGAAGGGCATTTAGGAATTGAAAAAGTTGAAAT GGAAGAAGCTGGCGTAGGCGACATTGTCATCTTATCAGGTATTCCAGAAGTGACAATTGGTGACACAATTTGCGATCCTA AAAAAATTGTTCGACTTCCTCGTATTAAGCTAGATGAACCTACAGTTTCCGTCGATATGACAGTTAATAATAGCCCATTT GTTGGTCGTAGTGGTAAACACGTTACAATGAATAAAATTCGCGATCGCTTAGAAAAAGAAAAACGCGCTAATATTTCCCT CAGAATCGAAGATGAGAGCGGAGATCAAGATAAAATTACTGTATCAGGTCGCGGAGAGCTTCACTTAGCTGTTTTAGTAG AAGCTATGCGCCGTGAACAATACGAGTTTAGCATTTCTAAACCTCGAGTTATTATTAAAGAAGTCAATGGCGAGAAATAC GAACCGATTGAACGGGTACATATTGAGGTTCCACAAGACTACTCAGGAACAGTGATTGAAGAACTTTCCCGACGCAAAGG AGAACTTCAACTACTAGATACAGATGAAAATGGAATTACTGCTATAGACTTTTTGATTCCTACAAGAGGGCTCATGGGTT ATCGCAATGACTTTTTAACCGCGACTAGAGGTCTCGGAATTTTGACGTCTGTTTTTGAAAACTTTTCTCCTTGGAAAGGA ACTATTCCTGGTCGTACAAGGGGTGTCTTACTCTCTAATGGACCAGGCAAAACCAGCGGTTACGCTTGCTTTAATTTACA AGATCGTGGAGTCATGTTTGTTGCTCCCGGGGATGAGGTTTACGAAGGAATGGTCGTTGGAGAGAATAGTCGCGATAATG ACTTAGTGGTCAACGTAACTAAAGGAAAACAATTGACAAACGTCAGAGCTTCTGGAAGTGATGAAAACATTATCTTAATC CCTGCTCGCCGGTTTACTCTTGAACAGGCAATTGATTATATCCAAGATGATGAATTAATCGAAGTCACTCCTGACAGCAT CCGTATGCGAAAACGTCATCTTTTAGAGAATGACCGCAAACGAGCTGGTGGAAAAGCCTAA
Upstream 100 bases:
>100_bases TTTTTTAAATTCTGAAAGCTTATCATTTATGATTTATATAAAATGTTTGAATTATTAACCTGGCTGAAAAGTTTAGCCTC ATAAACTAAAAGATCACTTT
Downstream 100 bases:
>100_bases CTTTTTTTAACTCATCTTACCATGTGTAAGATGAGTTAAAATTTTAAATAAAAGGCTTACTTTCTTTTTTTAGGCTAATG GCTCAAAGTAACTCGTGATG
Product: putative elongation factor G (EF-G), fusA
Products: NA
Alternate protein names: Tyrosine phosphorylated protein A [H]
Number of amino acids: Translated: 606; Mature: 606
Protein sequence:
>606_residues MYSPEKIRNIAIIAHIDHGKTTLLDALLKQSKIFRDNQQVRERVMDSYDQEQERGITIFAKHTSVYFDDFKINIIDTPGH ADFSGEVERILGMVDSVLLLVDAQEGPMPQTRFVLSKSLKMGIKPIVVLNKIDRPHANPDRVLDLTFDLFSELGATDEQL DFRYCYASGLSGFAMHHMHDTHKDMRPLFELITYAVQQPKGSLENPFLMHVSTITYDDYVGRQACGKILEGTVKKGQQLI HIDENGVETKCTITRIEGHLGIEKVEMEEAGVGDIVILSGIPEVTIGDTICDPKKIVRLPRIKLDEPTVSVDMTVNNSPF VGRSGKHVTMNKIRDRLEKEKRANISLRIEDESGDQDKITVSGRGELHLAVLVEAMRREQYEFSISKPRVIIKEVNGEKY EPIERVHIEVPQDYSGTVIEELSRRKGELQLLDTDENGITAIDFLIPTRGLMGYRNDFLTATRGLGILTSVFENFSPWKG TIPGRTRGVLLSNGPGKTSGYACFNLQDRGVMFVAPGDEVYEGMVVGENSRDNDLVVNVTKGKQLTNVRASGSDENIILI PARRFTLEQAIDYIQDDELIEVTPDSIRMRKRHLLENDRKRAGGKA
Sequences:
>Translated_606_residues MYSPEKIRNIAIIAHIDHGKTTLLDALLKQSKIFRDNQQVRERVMDSYDQEQERGITIFAKHTSVYFDDFKINIIDTPGH ADFSGEVERILGMVDSVLLLVDAQEGPMPQTRFVLSKSLKMGIKPIVVLNKIDRPHANPDRVLDLTFDLFSELGATDEQL DFRYCYASGLSGFAMHHMHDTHKDMRPLFELITYAVQQPKGSLENPFLMHVSTITYDDYVGRQACGKILEGTVKKGQQLI HIDENGVETKCTITRIEGHLGIEKVEMEEAGVGDIVILSGIPEVTIGDTICDPKKIVRLPRIKLDEPTVSVDMTVNNSPF VGRSGKHVTMNKIRDRLEKEKRANISLRIEDESGDQDKITVSGRGELHLAVLVEAMRREQYEFSISKPRVIIKEVNGEKY EPIERVHIEVPQDYSGTVIEELSRRKGELQLLDTDENGITAIDFLIPTRGLMGYRNDFLTATRGLGILTSVFENFSPWKG TIPGRTRGVLLSNGPGKTSGYACFNLQDRGVMFVAPGDEVYEGMVVGENSRDNDLVVNVTKGKQLTNVRASGSDENIILI PARRFTLEQAIDYIQDDELIEVTPDSIRMRKRHLLENDRKRAGGKA >Mature_606_residues MYSPEKIRNIAIIAHIDHGKTTLLDALLKQSKIFRDNQQVRERVMDSYDQEQERGITIFAKHTSVYFDDFKINIIDTPGH ADFSGEVERILGMVDSVLLLVDAQEGPMPQTRFVLSKSLKMGIKPIVVLNKIDRPHANPDRVLDLTFDLFSELGATDEQL DFRYCYASGLSGFAMHHMHDTHKDMRPLFELITYAVQQPKGSLENPFLMHVSTITYDDYVGRQACGKILEGTVKKGQQLI HIDENGVETKCTITRIEGHLGIEKVEMEEAGVGDIVILSGIPEVTIGDTICDPKKIVRLPRIKLDEPTVSVDMTVNNSPF VGRSGKHVTMNKIRDRLEKEKRANISLRIEDESGDQDKITVSGRGELHLAVLVEAMRREQYEFSISKPRVIIKEVNGEKY EPIERVHIEVPQDYSGTVIEELSRRKGELQLLDTDENGITAIDFLIPTRGLMGYRNDFLTATRGLGILTSVFENFSPWKG TIPGRTRGVLLSNGPGKTSGYACFNLQDRGVMFVAPGDEVYEGMVVGENSRDNDLVVNVTKGKQLTNVRASGSDENIILI PARRFTLEQAIDYIQDDELIEVTPDSIRMRKRHLLENDRKRAGGKA
Specific function: Probably interacts with the ribosomes in a GTP dependent manner. GTPase that mediates interactions between enteropathogenic E.coli (EPEC) and epithelial cells [H]
COG id: COG1217
COG function: function code T; Predicted membrane GTPase involved in stress response
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GTP-binding elongation factor family. TypA subfamily [H]
Homologues:
Organism=Homo sapiens, GI157426893, Length=492, Percent_Identity=27.6422764227642, Blast_Score=129, Evalue=1e-29, Organism=Homo sapiens, GI94966754, Length=132, Percent_Identity=43.9393939393939, Blast_Score=119, Evalue=1e-26, Organism=Homo sapiens, GI18390331, Length=144, Percent_Identity=42.3611111111111, Blast_Score=103, Evalue=3e-22, Organism=Homo sapiens, GI4503483, Length=144, Percent_Identity=38.1944444444444, Blast_Score=103, Evalue=5e-22, Organism=Homo sapiens, GI310132016, Length=110, Percent_Identity=41.8181818181818, Blast_Score=94, Evalue=3e-19, Organism=Homo sapiens, GI310110807, Length=110, Percent_Identity=41.8181818181818, Blast_Score=94, Evalue=3e-19, Organism=Homo sapiens, GI310123363, Length=110, Percent_Identity=41.8181818181818, Blast_Score=94, Evalue=3e-19, Organism=Homo sapiens, GI25306287, Length=135, Percent_Identity=41.4814814814815, Blast_Score=91, Evalue=4e-18, Organism=Homo sapiens, GI19923640, Length=135, Percent_Identity=41.4814814814815, Blast_Score=91, Evalue=5e-18, Organism=Homo sapiens, GI25306283, Length=135, Percent_Identity=41.4814814814815, Blast_Score=90, Evalue=5e-18, Organism=Homo sapiens, GI217272894, Length=149, Percent_Identity=36.241610738255, Blast_Score=85, Evalue=2e-16, Organism=Homo sapiens, GI217272892, Length=149, Percent_Identity=36.241610738255, Blast_Score=85, Evalue=2e-16, Organism=Homo sapiens, GI34147630, Length=233, Percent_Identity=28.755364806867, Blast_Score=84, Evalue=5e-16, Organism=Homo sapiens, GI223555963, Length=323, Percent_Identity=26.9349845201238, Blast_Score=78, Evalue=2e-14, Organism=Homo sapiens, GI5729864, Length=323, Percent_Identity=26.9349845201238, Blast_Score=78, Evalue=3e-14, Organism=Homo sapiens, GI94966752, Length=81, Percent_Identity=43.2098765432099, Blast_Score=73, Evalue=8e-13, Organism=Homo sapiens, GI53729339, Length=253, Percent_Identity=27.6679841897233, Blast_Score=69, Evalue=1e-11, Organism=Homo sapiens, GI53729337, Length=253, Percent_Identity=27.6679841897233, Blast_Score=69, Evalue=1e-11, Organism=Escherichia coli, GI48994988, Length=599, Percent_Identity=52.754590984975, Blast_Score=647, Evalue=0.0, Organism=Escherichia coli, GI1788922, Length=510, Percent_Identity=28.2352941176471, Blast_Score=129, Evalue=6e-31, Organism=Escherichia coli, GI1789738, Length=148, Percent_Identity=37.8378378378378, Blast_Score=94, Evalue=3e-20, Organism=Escherichia coli, GI1789737, Length=323, Percent_Identity=26.0061919504644, Blast_Score=76, Evalue=5e-15, Organism=Escherichia coli, GI1790835, Length=145, Percent_Identity=32.4137931034483, Blast_Score=76, Evalue=5e-15, Organism=Escherichia coli, GI1790412, Length=323, Percent_Identity=26.0061919504644, Blast_Score=76, Evalue=5e-15, Organism=Escherichia coli, GI1789559, Length=292, Percent_Identity=27.7397260273973, Blast_Score=75, Evalue=1e-14, Organism=Caenorhabditis elegans, GI17557151, Length=290, Percent_Identity=31.3793103448276, Blast_Score=122, Evalue=7e-28, Organism=Caenorhabditis elegans, GI71988811, Length=130, Percent_Identity=42.3076923076923, Blast_Score=111, Evalue=1e-24, Organism=Caenorhabditis elegans, GI71988819, Length=130, Percent_Identity=42.3076923076923, Blast_Score=111, Evalue=1e-24, Organism=Caenorhabditis elegans, GI17506493, Length=156, Percent_Identity=35.8974358974359, Blast_Score=100, Evalue=2e-21, Organism=Caenorhabditis elegans, GI17533571, Length=145, Percent_Identity=40.6896551724138, Blast_Score=96, Evalue=4e-20, Organism=Caenorhabditis elegans, GI17556745, Length=141, Percent_Identity=37.5886524822695, Blast_Score=96, Evalue=7e-20, Organism=Caenorhabditis elegans, GI17552882, Length=140, Percent_Identity=35, Blast_Score=86, Evalue=6e-17, Organism=Caenorhabditis elegans, GI17556456, Length=261, Percent_Identity=27.2030651340996, Blast_Score=77, Evalue=2e-14, Organism=Saccharomyces cerevisiae, GI6323320, Length=520, Percent_Identity=26.7307692307692, Blast_Score=126, Evalue=1e-29, Organism=Saccharomyces cerevisiae, GI6324707, Length=144, Percent_Identity=41.6666666666667, Blast_Score=110, Evalue=5e-25, Organism=Saccharomyces cerevisiae, GI6320593, Length=144, Percent_Identity=41.6666666666667, Blast_Score=110, Evalue=5e-25, Organism=Saccharomyces cerevisiae, GI6323098, Length=148, Percent_Identity=39.1891891891892, Blast_Score=97, Evalue=8e-21, Organism=Saccharomyces cerevisiae, GI6324166, Length=145, Percent_Identity=41.3793103448276, Blast_Score=95, Evalue=3e-20, Organism=Saccharomyces cerevisiae, GI6324761, Length=280, Percent_Identity=28.9285714285714, Blast_Score=94, Evalue=6e-20, Organism=Saccharomyces cerevisiae, GI6322359, Length=133, Percent_Identity=42.8571428571429, Blast_Score=89, Evalue=2e-18, Organism=Saccharomyces cerevisiae, GI6322675, Length=143, Percent_Identity=31.4685314685315, Blast_Score=67, Evalue=9e-12, Organism=Drosophila melanogaster, GI78706572, Length=516, Percent_Identity=25.968992248062, Blast_Score=126, Evalue=4e-29, Organism=Drosophila melanogaster, GI28574573, Length=139, Percent_Identity=41.726618705036, Blast_Score=108, Evalue=1e-23, Organism=Drosophila melanogaster, GI24585711, Length=148, Percent_Identity=39.1891891891892, Blast_Score=105, Evalue=1e-22, Organism=Drosophila melanogaster, GI24585713, Length=148, Percent_Identity=39.1891891891892, Blast_Score=105, Evalue=1e-22, Organism=Drosophila melanogaster, GI24585709, Length=148, Percent_Identity=39.1891891891892, Blast_Score=105, Evalue=1e-22, Organism=Drosophila melanogaster, GI24582462, Length=144, Percent_Identity=42.3611111111111, Blast_Score=104, Evalue=2e-22, Organism=Drosophila melanogaster, GI21357743, Length=197, Percent_Identity=33.502538071066, Blast_Score=101, Evalue=2e-21, Organism=Drosophila melanogaster, GI281363316, Length=330, Percent_Identity=27.2727272727273, Blast_Score=97, Evalue=3e-20, Organism=Drosophila melanogaster, GI17864358, Length=330, Percent_Identity=27.2727272727273, Blast_Score=97, Evalue=3e-20, Organism=Drosophila melanogaster, GI221458488, Length=140, Percent_Identity=40.7142857142857, Blast_Score=89, Evalue=6e-18, Organism=Drosophila melanogaster, GI19922690, Length=243, Percent_Identity=30.0411522633745, Blast_Score=74, Evalue=4e-13, Organism=Drosophila melanogaster, GI19921738, Length=241, Percent_Identity=26.5560165975104, Blast_Score=72, Evalue=1e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009022 - InterPro: IPR000795 - InterPro: IPR005225 - InterPro: IPR000640 - InterPro: IPR004161 - InterPro: IPR009000 - InterPro: IPR006298 [H]
Pfam domain/function: PF00679 EFG_C; PF00009 GTP_EFTU; PF03144 GTP_EFTU_D2 [H]
EC number: NA
Molecular weight: Translated: 68178; Mature: 68178
Theoretical pI: Translated: 5.78; Mature: 5.78
Prosite motif: PS00301 EFACTOR_GTP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYSPEKIRNIAIIAHIDHGKTTLLDALLKQSKIFRDNQQVRERVMDSYDQEQERGITIFA CCCHHHHCEEEEEEEECCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHCCEEEEE KHTSVYFDDFKINIIDTPGHADFSGEVERILGMVDSVLLLVDAQEGPMPQTRFVLSKSLK EEEEEEEEEEEEEEEECCCCCCCCHHHHHHHHHHHEEEEEEECCCCCCCHHHHHHHHHHH MGIKPIVVLNKIDRPHANPDRVLDLTFDLFSELGATDEQLDFRYCYASGLSGFAMHHMHD CCCCEEEEEECCCCCCCCCCCEEEEHHHHHHHHCCCCHHCEEEEEECCCCCHHHHHHHHH THKDMRPLFELITYAVQQPKGSLENPFLMHVSTITYDDYVGRQACGKILEGTVKKGQQLI HHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEEEHHHCCHHHHHHHHHHHHHCCCEEE HIDENGVETKCTITRIEGHLGIEKVEMEEAGVGDIVILSGIPEVTIGDTICDPKKIVRLP EECCCCCEEEEEEEEECCCCCCEEEEHHHCCCCCEEEECCCCCEECCCCCCCHHHHHHCC RIKLDEPTVSVDMTVNNSPFVGRSGKHVTMNKIRDRLEKEKRANISLRIEDESGDQDKIT CEEECCCEEEEEEEECCCCCCCCCCCEEEHHHHHHHHHHHHHCCEEEEEECCCCCCCEEE VSGRGELHLAVLVEAMRREQYEFSISKPRVIIKEVNGEKYEPIERVHIEVPQDYSGTVIE ECCCCCEEHHHHHHHHHHHCEEEECCCCEEEEEECCCCCCCCCEEEEEECCCCCCCHHHH ELSRRKGELQLLDTDENGITAIDFLIPTRGLMGYRNDFLTATRGLGILTSVFENFSPWKG HHHCCCCCEEEEECCCCCCEEEEEEECCCCCCCCCHHHHHHHCCHHHHHHHHHCCCCCCC TIPGRTRGVLLSNGPGKTSGYACFNLQDRGVMFVAPGDEVYEGMVVGENSRDNDLVVNVT CCCCCCCEEEEECCCCCCCCEEEEEECCCCEEEEECCHHHHCCEEECCCCCCCCEEEEEE KGKQLTNVRASGSDENIILIPARRFTLEQAIDYIQDDELIEVTPDSIRMRKRHLLENDRK CCCEEEEEECCCCCCCEEEEECCHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHH RAGGKA HCCCCC >Mature Secondary Structure MYSPEKIRNIAIIAHIDHGKTTLLDALLKQSKIFRDNQQVRERVMDSYDQEQERGITIFA CCCHHHHCEEEEEEEECCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHCCEEEEE KHTSVYFDDFKINIIDTPGHADFSGEVERILGMVDSVLLLVDAQEGPMPQTRFVLSKSLK EEEEEEEEEEEEEEEECCCCCCCCHHHHHHHHHHHEEEEEEECCCCCCCHHHHHHHHHHH MGIKPIVVLNKIDRPHANPDRVLDLTFDLFSELGATDEQLDFRYCYASGLSGFAMHHMHD CCCCEEEEEECCCCCCCCCCCEEEEHHHHHHHHCCCCHHCEEEEEECCCCCHHHHHHHHH THKDMRPLFELITYAVQQPKGSLENPFLMHVSTITYDDYVGRQACGKILEGTVKKGQQLI HHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEEEHHHCCHHHHHHHHHHHHHCCCEEE HIDENGVETKCTITRIEGHLGIEKVEMEEAGVGDIVILSGIPEVTIGDTICDPKKIVRLP EECCCCCEEEEEEEEECCCCCCEEEEHHHCCCCCEEEECCCCCEECCCCCCCHHHHHHCC RIKLDEPTVSVDMTVNNSPFVGRSGKHVTMNKIRDRLEKEKRANISLRIEDESGDQDKIT CEEECCCEEEEEEEECCCCCCCCCCCEEEHHHHHHHHHHHHHCCEEEEEECCCCCCCEEE VSGRGELHLAVLVEAMRREQYEFSISKPRVIIKEVNGEKYEPIERVHIEVPQDYSGTVIE ECCCCCEEHHHHHHHHHHHCEEEECCCCEEEEEECCCCCCCCCEEEEEECCCCCCCHHHH ELSRRKGELQLLDTDENGITAIDFLIPTRGLMGYRNDFLTATRGLGILTSVFENFSPWKG HHHCCCCCEEEEECCCCCCEEEEEEECCCCCCCCCHHHHHHHCCHHHHHHHHHCCCCCCC TIPGRTRGVLLSNGPGKTSGYACFNLQDRGVMFVAPGDEVYEGMVVGENSRDNDLVVNVT CCCCCCCEEEEECCCCCCCCEEEEEECCCCEEEEECCHHHHCCEEECCCCCCCCEEEEEE KGKQLTNVRASGSDENIILIPARRFTLEQAIDYIQDDELIEVTPDSIRMRKRHLLENDRK CCCEEEEEECCCCCCCEEEEECCHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHH RAGGKA HCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9622352 [H]