Definition Candidatus Protochlamydia amoebophila UWE25, complete genome.
Accession NC_005861
Length 2,414,465

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The map label for this gene is 46446743

Identifier: 46446743

GI number: 46446743

Start: 1330049

End: 1330588

Strand: Direct

Name: 46446743

Synonym: pc1109

Alternate gene names: NA

Gene position: 1330049-1330588 (Clockwise)

Preceding gene: 46446740

Following gene: 46446744

Centisome position: 55.09

GC content: 37.96

Gene sequence:

>540_bases
ATGACCCAACAAACCAAAATGATCGAAGAAGATTTGGCTATTCGACTTCCCAACCATGATATCTTATCCACCCCAGTCAC
TTTAGAAGCCGTTGTATTCTACGCTTCTGAAAGTGAAAAAATCAAAAAGAAAATTGATCATCTTGCAGCAGAAGTTAGCC
AAAAACAAGATAGAATCAAGTTTGTTAATGAAATTATTCAAGAAATTAATAACTCCATAGATCCGTCGACGGGAAAAGTG
GACTTAAGAAACAAAGCCGAATTTCTAGAAAAATTAAACACTGCAAAAGGAATGGGCATCAATATACCGATGGATTCCAA
AACTGAGCATCCCAAAGCCCATTTTAATGCCGAAGAAAGGGAGCGTTTTTTGCAAAATCTAGGTTTATCTGCTGATGCAT
GGGATAAAGAAAACAAGCAACATACCCAAAAAATGCAAATGTATCTAGATGAATCTAATCGTTATTTGACTTTAGCGACA
CAAGCGATGAAGTACGAAGACAAACCCAAGAGGGCGGCCCTCGCTGCAATGGGAAGATAA

Upstream 100 bases:

>100_bases
AAAGTTAAATATTTACCTAATTAGACGGATGTGATATAATTAATCTTAATTATAATAATACTAACCTTTTAAGTTAAAAT
TTTTTCAAAATGGAGGTTTT

Downstream 100 bases:

>100_bases
GATGACCGCATCTAATTACCGCTTAGTCGACCTTGAAAAAAAAGAGATAATGGCAAAAACTAAAAATTTGCATTATATGG
CCTATCATCTTTATCGAGAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 179; Mature: 178

Protein sequence:

>179_residues
MTQQTKMIEEDLAIRLPNHDILSTPVTLEAVVFYASESEKIKKKIDHLAAEVSQKQDRIKFVNEIIQEINNSIDPSTGKV
DLRNKAEFLEKLNTAKGMGINIPMDSKTEHPKAHFNAEERERFLQNLGLSADAWDKENKQHTQKMQMYLDESNRYLTLAT
QAMKYEDKPKRAALAAMGR

Sequences:

>Translated_179_residues
MTQQTKMIEEDLAIRLPNHDILSTPVTLEAVVFYASESEKIKKKIDHLAAEVSQKQDRIKFVNEIIQEINNSIDPSTGKV
DLRNKAEFLEKLNTAKGMGINIPMDSKTEHPKAHFNAEERERFLQNLGLSADAWDKENKQHTQKMQMYLDESNRYLTLAT
QAMKYEDKPKRAALAAMGR
>Mature_178_residues
TQQTKMIEEDLAIRLPNHDILSTPVTLEAVVFYASESEKIKKKIDHLAAEVSQKQDRIKFVNEIIQEINNSIDPSTGKVD
LRNKAEFLEKLNTAKGMGINIPMDSKTEHPKAHFNAEERERFLQNLGLSADAWDKENKQHTQKMQMYLDESNRYLTLATQ
AMKYEDKPKRAALAAMGR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20532; Mature: 20400

Theoretical pI: Translated: 7.09; Mature: 7.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQQTKMIEEDLAIRLPNHDILSTPVTLEAVVFYASESEKIKKKIDHLAAEVSQKQDRIK
CCCHHHHHHHHHEEECCCCCCCCCCCEEEHHEEECCCHHHHHHHHHHHHHHHHHHHHHHH
FVNEIIQEINNSIDPSTGKVDLRNKAEFLEKLNTAKGMGINIPMDSKTEHPKAHFNAEER
HHHHHHHHHCCCCCCCCCCEECHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCHHHH
ERFLQNLGLSADAWDKENKQHTQKMQMYLDESNRYLTLATQAMKYEDKPKRAALAAMGR
HHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEHHHHHHCCCCHHHHHHHHCCC
>Mature Secondary Structure 
TQQTKMIEEDLAIRLPNHDILSTPVTLEAVVFYASESEKIKKKIDHLAAEVSQKQDRIK
CCHHHHHHHHHEEECCCCCCCCCCCEEEHHEEECCCHHHHHHHHHHHHHHHHHHHHHHH
FVNEIIQEINNSIDPSTGKVDLRNKAEFLEKLNTAKGMGINIPMDSKTEHPKAHFNAEER
HHHHHHHHHCCCCCCCCCCEECHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCHHHH
ERFLQNLGLSADAWDKENKQHTQKMQMYLDESNRYLTLATQAMKYEDKPKRAALAAMGR
HHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEHHHHHHCCCCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA