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The map label for this gene is rsmI [H]

Identifier: 46446733

GI number: 46446733

Start: 1318504

End: 1319229

Strand: Reverse

Name: rsmI [H]

Synonym: pc1099

Alternate gene names: 46446733

Gene position: 1319229-1318504 (Counterclockwise)

Preceding gene: 46446734

Following gene: 46446727

Centisome position: 54.64

GC content: 37.88

Gene sequence:

>726_bases
GTGATATTTATGAGTGATAAACCTGCTTTACTTCTATTACCTAACCTTTTAGGTGATCATCGTCATGCTGAAGTTTTTTT
ACCAGCTAGTGTTTCGAAAGCCGTTCAATCCATTGATGGCTTAATTGCTGAAAGCGAAACAGAGGGAAGACGTTATTTAA
AACGATTTGCAACCAAAAAACCAGCAGTTGAAATTCCGATTGCTTTGTTTAATGAACATACTCCCGATGAACATATAGAC
TTTTTTTTAGAACCAATTTTAAAAGGGGAACGATGGGGATTAGTTTCTGATGCAGGACTTCCTTGTATTGCAGATCCTGG
TTCAAAATTGGTGCATCGTGCCCGCCAACAAGGAATACACATTCAAACTTTTGTAGGGCCTTCTTCTTTATTAATGGCGC
TTATGCTATCTGGGTTACCAGGTCAAAAGTTTTTCTTTCATGGTTACTTAGACAAAGAACCTACTAACAGGCAAATTCAG
TTAAAAAACCTTGTTCACAGAGCACAACAAGATCAGGCAACTCAGATTTTTATGGAAGCCCCTTATCGAAATGCCCACAC
ACTAGAATCGACTTTAAAATCCTTGCCTGATCAGGCTTGGTTATGTATTGCCTGGGATTTAACTATGCCTACACAAGGAG
TCATTTGCCAAACGATTGAAAGTTGGAAAAAAAGCACTCTTCCTAATCTAGAAAAAAAACCAGCAATTTTTCTTGTGCAT
GTTTAA

Upstream 100 bases:

>100_bases
TTTTATTTATTGATAATACCGAAATGCGTGTAAAAAATTCGCATGCTGATGAAAAATTATTGATGGAACTATTAATGATT
CAATTAACCCGCACAATTTA

Downstream 100 bases:

>100_bases
TCTATTTTTGGTTTTTTAATAAACTGATTAATCGACTATAGGTAGATTTAAGAGAAAAAGAAAAGTTACGATTTTTAAAA
CTTTTTAGTGTCAATCATAG

Product: hypothetical protein

Products: NA

Alternate protein names: 16S rRNA 2'-O-ribose C1402 methyltransferase; rRNA (cytidine-2'-O-)-methyltransferase RsmI [H]

Number of amino acids: Translated: 241; Mature: 241

Protein sequence:

>241_residues
MIFMSDKPALLLLPNLLGDHRHAEVFLPASVSKAVQSIDGLIAESETEGRRYLKRFATKKPAVEIPIALFNEHTPDEHID
FFLEPILKGERWGLVSDAGLPCIADPGSKLVHRARQQGIHIQTFVGPSSLLMALMLSGLPGQKFFFHGYLDKEPTNRQIQ
LKNLVHRAQQDQATQIFMEAPYRNAHTLESTLKSLPDQAWLCIAWDLTMPTQGVICQTIESWKKSTLPNLEKKPAIFLVH
V

Sequences:

>Translated_241_residues
MIFMSDKPALLLLPNLLGDHRHAEVFLPASVSKAVQSIDGLIAESETEGRRYLKRFATKKPAVEIPIALFNEHTPDEHID
FFLEPILKGERWGLVSDAGLPCIADPGSKLVHRARQQGIHIQTFVGPSSLLMALMLSGLPGQKFFFHGYLDKEPTNRQIQ
LKNLVHRAQQDQATQIFMEAPYRNAHTLESTLKSLPDQAWLCIAWDLTMPTQGVICQTIESWKKSTLPNLEKKPAIFLVH
V
>Mature_241_residues
MIFMSDKPALLLLPNLLGDHRHAEVFLPASVSKAVQSIDGLIAESETEGRRYLKRFATKKPAVEIPIALFNEHTPDEHID
FFLEPILKGERWGLVSDAGLPCIADPGSKLVHRARQQGIHIQTFVGPSSLLMALMLSGLPGQKFFFHGYLDKEPTNRQIQ
LKNLVHRAQQDQATQIFMEAPYRNAHTLESTLKSLPDQAWLCIAWDLTMPTQGVICQTIESWKKSTLPNLEKKPAIFLVH
V

Specific function: Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA [H]

COG id: COG0313

COG function: function code R; Predicted methyltransferases

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. RsmI family [H]

Homologues:

Organism=Escherichia coli, GI1789535, Length=176, Percent_Identity=27.8409090909091, Blast_Score=79, Evalue=3e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000878
- InterPro:   IPR014777
- InterPro:   IPR014776
- InterPro:   IPR008189
- InterPro:   IPR018063 [H]

Pfam domain/function: PF00590 TP_methylase [H]

EC number: NA

Molecular weight: Translated: 27108; Mature: 27108

Theoretical pI: Translated: 7.72; Mature: 7.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIFMSDKPALLLLPNLLGDHRHAEVFLPASVSKAVQSIDGLIAESETEGRRYLKRFATKK
CEEECCCCCEEEECHHHCCCCCCEEEECHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCC
PAVEIPIALFNEHTPDEHIDFFLEPILKGERWGLVSDAGLPCIADPGSKLVHRARQQGIH
CCEEEEHHHHCCCCCHHHHHHHHHHHHCCCCCCEECCCCCCEECCCCHHHHHHHHHCCCE
IQTFVGPSSLLMALMLSGLPGQKFFFHGYLDKEPTNRQIQLKNLVHRAQQDQATQIFMEA
EEEECCHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCEEHHHHHHHHHHHHHHHHHHHCC
PYRNAHTLESTLKSLPDQAWLCIAWDLTMPTQGVICQTIESWKKSTLPNLEKKPAIFLVH
CCCCHHHHHHHHHHCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEEE
V
C
>Mature Secondary Structure
MIFMSDKPALLLLPNLLGDHRHAEVFLPASVSKAVQSIDGLIAESETEGRRYLKRFATKK
CEEECCCCCEEEECHHHCCCCCCEEEECHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCC
PAVEIPIALFNEHTPDEHIDFFLEPILKGERWGLVSDAGLPCIADPGSKLVHRARQQGIH
CCEEEEHHHHCCCCCHHHHHHHHHHHHCCCCCCEECCCCCCEECCCCHHHHHHHHHCCCE
IQTFVGPSSLLMALMLSGLPGQKFFFHGYLDKEPTNRQIQLKNLVHRAQQDQATQIFMEA
EEEECCHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCEEHHHHHHHHHHHHHHHHHHHCC
PYRNAHTLESTLKSLPDQAWLCIAWDLTMPTQGVICQTIESWKKSTLPNLEKKPAIFLVH
CCCCHHHHHHHHHHCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEEE
V
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10910347 [H]