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The map label for this gene is ysgA [C]

Identifier: 46446727

GI number: 46446727

Start: 1310772

End: 1311503

Strand: Reverse

Name: ysgA [C]

Synonym: pc1093

Alternate gene names: 46446727

Gene position: 1311503-1310772 (Counterclockwise)

Preceding gene: 46446733

Following gene: 46446724

Centisome position: 54.32

GC content: 38.11

Gene sequence:

>732_bases
ATGAAAGATCGTGAAATCGTCTATGAGGTAGATAATCAAATATTCAAAGGATATTTTGTTAATTTTTCTGAAACAAAACA
AAAAAAACCGGCTATTTTAATTGCACATACATGGATGGGAAGAAATGCGTTTGTGTGCGAAAAAGCTCAAGAATTAGCTA
AATTAGGGTATATCGGTTTTGCAGTGGATTTATATGGTGAGGGAAGAGTAGCGCAAAATGGGGAAGAAGCTGGCGCATTG
ATGAAGCCTCTTTTCATGGATCGGCAACTTCTGCAAAAGCGTATTTTTGGTGCTATGCAGGCTTTAGTTCAACAACCGGA
AGTTGATGCAGGAAAGGTTGGCGCAATTGGATTTTGTTTTGGAGGGTTGACAGTGATAGAACTATTACGTAGTGGGGCTG
ATGTGAAGGGTGTTGTCAGTTTTCATGGTATATTAGGAAGTCAAAAAGAGGGGAATAATGTGAAAACCGCTTCGATTGCA
AAATCTATAAAAGGTTCCTTATTAGTGTTGCATGGATACCACGATCCCTATGTACCTGTAGATAATGTACTCCATTTGCA
AAAGGAAATGACCGATGCCAATGTAGACTGGCAATTTAATACTTATGGAAATGCTGGGCATTCTTTCACAAATCCTGAAG
AGAACGATAAAAAAGGTGGAAAGTTTTATGAGCCTAAAACGTGTGATCGAGCTTGGCTTGCCATGAAAAATTTTTTTGAG
GAAATCTTTTAA

Upstream 100 bases:

>100_bases
TAAAAAGTGAATATTTAAAGAGCTTAAGAAAGCTAATTCTCTTTAGGTACATTAAAAAAATAACAAGTATTAATTTTTAT
TTAATGAGAAAGGGTTTGCC

Downstream 100 bases:

>100_bases
TCCCTTTTCCGGTAAGGTTTCAGCCAAAATAGAAGAACTGTCCCTATGGTCACGATTAATCCACCTGGATAAGTTAAAAG
ATATTTAGCTGGATCTTGAT

Product: putative carboxymethylenebutenolidase

Products: NA

Alternate protein names: Dienelactone hydrolase; DLH [H]

Number of amino acids: Translated: 243; Mature: 243

Protein sequence:

>243_residues
MKDREIVYEVDNQIFKGYFVNFSETKQKKPAILIAHTWMGRNAFVCEKAQELAKLGYIGFAVDLYGEGRVAQNGEEAGAL
MKPLFMDRQLLQKRIFGAMQALVQQPEVDAGKVGAIGFCFGGLTVIELLRSGADVKGVVSFHGILGSQKEGNNVKTASIA
KSIKGSLLVLHGYHDPYVPVDNVLHLQKEMTDANVDWQFNTYGNAGHSFTNPEENDKKGGKFYEPKTCDRAWLAMKNFFE
EIF

Sequences:

>Translated_243_residues
MKDREIVYEVDNQIFKGYFVNFSETKQKKPAILIAHTWMGRNAFVCEKAQELAKLGYIGFAVDLYGEGRVAQNGEEAGAL
MKPLFMDRQLLQKRIFGAMQALVQQPEVDAGKVGAIGFCFGGLTVIELLRSGADVKGVVSFHGILGSQKEGNNVKTASIA
KSIKGSLLVLHGYHDPYVPVDNVLHLQKEMTDANVDWQFNTYGNAGHSFTNPEENDKKGGKFYEPKTCDRAWLAMKNFFE
EIF
>Mature_243_residues
MKDREIVYEVDNQIFKGYFVNFSETKQKKPAILIAHTWMGRNAFVCEKAQELAKLGYIGFAVDLYGEGRVAQNGEEAGAL
MKPLFMDRQLLQKRIFGAMQALVQQPEVDAGKVGAIGFCFGGLTVIELLRSGADVKGVVSFHGILGSQKEGNNVKTASIA
KSIKGSLLVLHGYHDPYVPVDNVLHLQKEMTDANVDWQFNTYGNAGHSFTNPEENDKKGGKFYEPKTCDRAWLAMKNFFE
EIF

Specific function: Unknown

COG id: COG0412

COG function: function code Q; Dienelactone hydrolase and related enzymes

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dienelactone hydrolase family [H]

Homologues:

Organism=Caenorhabditis elegans, GI17536419, Length=234, Percent_Identity=36.7521367521368, Blast_Score=142, Evalue=2e-34,
Organism=Caenorhabditis elegans, GI17532655, Length=232, Percent_Identity=35.7758620689655, Blast_Score=137, Evalue=7e-33,
Organism=Caenorhabditis elegans, GI17532653, Length=240, Percent_Identity=31.25, Blast_Score=108, Evalue=3e-24,
Organism=Caenorhabditis elegans, GI17536415, Length=236, Percent_Identity=31.3559322033898, Blast_Score=108, Evalue=4e-24,
Organism=Caenorhabditis elegans, GI193204305, Length=218, Percent_Identity=30.2752293577982, Blast_Score=107, Evalue=4e-24,
Organism=Caenorhabditis elegans, GI17534829, Length=155, Percent_Identity=35.4838709677419, Blast_Score=80, Evalue=1e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002925 [H]

Pfam domain/function: PF01738 DLH [H]

EC number: =3.1.1.45 [H]

Molecular weight: Translated: 27094; Mature: 27094

Theoretical pI: Translated: 7.13; Mature: 7.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKDREIVYEVDNQIFKGYFVNFSETKQKKPAILIAHTWMGRNAFVCEKAQELAKLGYIGF
CCCCHHHHHHHHHHHHHHEECCHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHHHCHHEE
AVDLYGEGRVAQNGEEAGALMKPLFMDRQLLQKRIFGAMQALVQQPEVDAGKVGAIGFCF
EEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHH
GGLTVIELLRSGADVKGVVSFHGILGSQKEGNNVKTASIAKSIKGSLLVLHGYHDPYVPV
HHHHHHHHHHCCCCCEEHHHHHHHCCCCCCCCCCHHHHHHHHCCCCEEEEECCCCCCCCH
DNVLHLQKEMTDANVDWQFNTYGNAGHSFTNPEENDKKGGKFYEPKTCDRAWLAMKNFFE
HHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
EIF
HHC
>Mature Secondary Structure
MKDREIVYEVDNQIFKGYFVNFSETKQKKPAILIAHTWMGRNAFVCEKAQELAKLGYIGF
CCCCHHHHHHHHHHHHHHEECCHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHHHCHHEE
AVDLYGEGRVAQNGEEAGALMKPLFMDRQLLQKRIFGAMQALVQQPEVDAGKVGAIGFCF
EEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHH
GGLTVIELLRSGADVKGVVSFHGILGSQKEGNNVKTASIAKSIKGSLLVLHGYHDPYVPV
HHHHHHHHHHCCCCCEEHHHHHHHCCCCCCCCCCHHHHHHHHCCCCEEEEECCCCCCCCH
DNVLHLQKEMTDANVDWQFNTYGNAGHSFTNPEENDKKGGKFYEPKTCDRAWLAMKNFFE
HHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
EIF
HHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9537320 [H]