| Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
|---|---|
| Accession | NC_005861 |
| Length | 2,414,465 |
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The map label for this gene is 46446695
Identifier: 46446695
GI number: 46446695
Start: 1262887
End: 1263300
Strand: Direct
Name: 46446695
Synonym: pc1061
Alternate gene names: NA
Gene position: 1262887-1263300 (Clockwise)
Preceding gene: 46446694
Following gene: 46446699
Centisome position: 52.31
GC content: 33.33
Gene sequence:
>414_bases ATGCCCTCTGTTAGTTTTAAACAAGAAATTTTCATTCCTTTTCATTATGTAGACGCCGCAGGGATTTTATTTTTTGGACA TACCTTTACTTTAGCTCATCAAGTTTTTGAAAGCTTCGTCGTACAAGCACTTTGTTGCTCATGGGCACAATGGTTTCAAA ATCCCTCTTGGATTGTCCCTATCAAAAACGCTGAAGCTTCTTTCCAAGCTCCTTTATTAGCAGGACTTTCGTGTCAAGTT CAACTAAGCATTGAAGAAATTAAACAAAACTCTTTTTCTGTTCATTATGAATTTATTCAAAATGATCAACTTTGTTGTAT GGTCAAAACCATTCACGTATTTTGTAATCGACAAAGTAAGGATAAACTTCTAATCCCCAATGAAATTAAAAGCCAATTAG AATTATATTTTTGA
Upstream 100 bases:
>100_bases TACGGGTCGTTATTCATTAGCAGGAGGTATTGCAACGATCATTACTGGTTTTAAACCCATGAAATAAACGATATATAAAC ATATTCCATGTTGAGAAAAG
Downstream 100 bases:
>100_bases GGATTTGTTTATTCGTTCAAAGTTATTAATTTAATCAGCTCGCTTTTTAATATTTTTCCTAGAGGTGAACGGGGAATATT TTCAACAGCAATAACGTTTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 137; Mature: 136
Protein sequence:
>137_residues MPSVSFKQEIFIPFHYVDAAGILFFGHTFTLAHQVFESFVVQALCCSWAQWFQNPSWIVPIKNAEASFQAPLLAGLSCQV QLSIEEIKQNSFSVHYEFIQNDQLCCMVKTIHVFCNRQSKDKLLIPNEIKSQLELYF
Sequences:
>Translated_137_residues MPSVSFKQEIFIPFHYVDAAGILFFGHTFTLAHQVFESFVVQALCCSWAQWFQNPSWIVPIKNAEASFQAPLLAGLSCQV QLSIEEIKQNSFSVHYEFIQNDQLCCMVKTIHVFCNRQSKDKLLIPNEIKSQLELYF >Mature_136_residues PSVSFKQEIFIPFHYVDAAGILFFGHTFTLAHQVFESFVVQALCCSWAQWFQNPSWIVPIKNAEASFQAPLLAGLSCQVQ LSIEEIKQNSFSVHYEFIQNDQLCCMVKTIHVFCNRQSKDKLLIPNEIKSQLELYF
Specific function: Unknown
COG id: COG0824
COG function: function code R; Predicted thioesterase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15811; Mature: 15680
Theoretical pI: Translated: 6.33; Mature: 6.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.4 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 4.4 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSVSFKQEIFIPFHYVDAAGILFFGHTFTLAHQVFESFVVQALCCSWAQWFQNPSWIVP CCCCCCCCEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEE IKNAEASFQAPLLAGLSCQVQLSIEEIKQNSFSVHYEFIQNDQLCCMVKTIHVFCNRQSK ECCCCCCCCCHHHCCCEEEEEEEHHHHCCCCCEEEEEEECCCCEEHHHHHHHHHHCCCCC DKLLIPNEIKSQLELYF CCEECCHHHHHHHEECC >Mature Secondary Structure PSVSFKQEIFIPFHYVDAAGILFFGHTFTLAHQVFESFVVQALCCSWAQWFQNPSWIVP CCCCCCCEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEE IKNAEASFQAPLLAGLSCQVQLSIEEIKQNSFSVHYEFIQNDQLCCMVKTIHVFCNRQSK ECCCCCCCCCHHHCCCEEEEEEEHHHHCCCCCEEEEEEECCCCEEHHHHHHHHHHCCCCC DKLLIPNEIKSQLELYF CCEECCHHHHHHHEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA