| Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
|---|---|
| Accession | NC_005861 |
| Length | 2,414,465 |
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The map label for this gene is 46446684
Identifier: 46446684
GI number: 46446684
Start: 1250725
End: 1251381
Strand: Direct
Name: 46446684
Synonym: pc1050
Alternate gene names: NA
Gene position: 1250725-1251381 (Clockwise)
Preceding gene: 46446683
Following gene: 46446685
Centisome position: 51.8
GC content: 29.22
Gene sequence:
>657_bases ATGAAAAAAAGTTTTTTGACTGGTTTTGCTATTTTATTTCCCGTGATACTCACTATCATTATCATTGGCTTTTTCATCAA CTTTTTGACTTATCCTTTTTTGAACCTTACTAAATTTTGGTTAAATCAATTTAATTGGTATGAAAATTATTCTATTCTAT TTGCAGATTTAGGGATCACTCATTTTATCAGTCAATTATTAATTTTAGGATTACTAATAGGTATTATTTTTGGCGTTGGA TTACTAGGGCAACTTTTTTTAATTAATTATATTTTAAAATTAGGGAATACCTTAATTTTAGCCATCCCCTACATCAATAA AATTTATAAGTTTTCTCAAGAATTTGTCTTCAGTTTGTTTTCCTCCCACTCTAAATCCTTTGCTTATGTAGTACTAGCTC CATATCCCTCTGTAAACCATTTAAGCTTAGGATTTGTCTCGAAAAGTCTTTTAAATTTTCAAGAGCATGAACGTTTAATC TCTGTCTTCATCCCCGGAACACCTAATCCTTCTATTGGATATACGTTAAAATTTAAAAAGAAGGATCTTCTTTTTCTCGA TATGAAGATTGATGAAGCAATGAAATTTGTGATATCTTTTGGAACTATAACGCATGATTTTAAACTTCTCGACCCAAATA AATGCCATGAAATCTAA
Upstream 100 bases:
>100_bases TGATTACACCTTCATTCCATCCTATTCAAAAAAAGCCCGATAGCACCCCTTCTTACGAATTAAATTCTCCTCCAATTTCT TTTCAAGAAACATAAGAGAT
Downstream 100 bases:
>100_bases AGTTTATTTTTTTAATGTTAAAGATAACCAAGCTAAAATTCATTTGATTTGCTCAAAAGCAAAGGAATCTTTTGAGCAAG AGAAACGACTACAAATCCTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 218; Mature: 218
Protein sequence:
>218_residues MKKSFLTGFAILFPVILTIIIIGFFINFLTYPFLNLTKFWLNQFNWYENYSILFADLGITHFISQLLILGLLIGIIFGVG LLGQLFLINYILKLGNTLILAIPYINKIYKFSQEFVFSLFSSHSKSFAYVVLAPYPSVNHLSLGFVSKSLLNFQEHERLI SVFIPGTPNPSIGYTLKFKKKDLLFLDMKIDEAMKFVISFGTITHDFKLLDPNKCHEI
Sequences:
>Translated_218_residues MKKSFLTGFAILFPVILTIIIIGFFINFLTYPFLNLTKFWLNQFNWYENYSILFADLGITHFISQLLILGLLIGIIFGVG LLGQLFLINYILKLGNTLILAIPYINKIYKFSQEFVFSLFSSHSKSFAYVVLAPYPSVNHLSLGFVSKSLLNFQEHERLI SVFIPGTPNPSIGYTLKFKKKDLLFLDMKIDEAMKFVISFGTITHDFKLLDPNKCHEI >Mature_218_residues MKKSFLTGFAILFPVILTIIIIGFFINFLTYPFLNLTKFWLNQFNWYENYSILFADLGITHFISQLLILGLLIGIIFGVG LLGQLFLINYILKLGNTLILAIPYINKIYKFSQEFVFSLFSSHSKSFAYVVLAPYPSVNHLSLGFVSKSLLNFQEHERLI SVFIPGTPNPSIGYTLKFKKKDLLFLDMKIDEAMKFVISFGTITHDFKLLDPNKCHEI
Specific function: Unknown
COG id: COG2928
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25042; Mature: 25042
Theoretical pI: Translated: 9.61; Mature: 9.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKSFLTGFAILFPVILTIIIIGFFINFLTYPFLNLTKFWLNQFNWYENYSILFADLGIT CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCHH HFISQLLILGLLIGIIFGVGLLGQLFLINYILKLGNTLILAIPYINKIYKFSQEFVFSLF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEHHHHHHHHHHHHHHHHHH SSHSKSFAYVVLAPYPSVNHLSLGFVSKSLLNFQEHERLISVFIPGTPNPSIGYTLKFKK HCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCEEEEECC KDLLFLDMKIDEAMKFVISFGTITHDFKLLDPNKCHEI CCEEEEEEHHHHHHHHHHHHCCCCCCEEECCCHHCCCC >Mature Secondary Structure MKKSFLTGFAILFPVILTIIIIGFFINFLTYPFLNLTKFWLNQFNWYENYSILFADLGIT CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCHH HFISQLLILGLLIGIIFGVGLLGQLFLINYILKLGNTLILAIPYINKIYKFSQEFVFSLF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEHHHHHHHHHHHHHHHHHH SSHSKSFAYVVLAPYPSVNHLSLGFVSKSLLNFQEHERLISVFIPGTPNPSIGYTLKFKK HCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCEEEEECC KDLLFLDMKIDEAMKFVISFGTITHDFKLLDPNKCHEI CCEEEEEEHHHHHHHHHHHHCCCCCCEEECCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA