| Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
|---|---|
| Accession | NC_005861 |
| Length | 2,414,465 |
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The map label for this gene is 46446683
Identifier: 46446683
GI number: 46446683
Start: 1250012
End: 1250719
Strand: Direct
Name: 46446683
Synonym: pc1049
Alternate gene names: NA
Gene position: 1250012-1250719 (Clockwise)
Preceding gene: 46446682
Following gene: 46446684
Centisome position: 51.77
GC content: 32.34
Gene sequence:
>708_bases ATGAAAAAATATTTTATCACGGGACTAGTCATTCTCCTTCCTGCCGCTCTAACCTTAGGTGTCGTTATTTTTATCTTTAA TCTATTGACGACGCCATTTTTAGGGATTGTTAAAATAGTATTTGAACAATATGGTCTATTCGAGAGAGGTTTTTTATTTC TGAATTCTGAGCAACTCCAAAATATTTTGGCACAAATATTAATCTTAACTAGTCTATTTTTTATCACAATTTTGCTTGGA TTAATTGGAAGGTGGTTTTTCTTTCGTAGTGTAATAAAATTTGCCGAATATCTTTTTAAAAATATTCCTTTAGTTAATAC AATTTATAATACCTGTAAAGACGTGATTAAAACGCTCTTTAATTCAAAGGCTAATTCCTTTAAACAAGTCGTGCTTGTCC GCTTTCCTAATCCTTCTACTTACTCGATTGGATTTATCACGAAAGAAGGTTTGCTAGGCCTTCACAACACTCCTTTTGAA AATTCCTCTATAGTATTCATTCCAACAACACCTAATCCTACATCTGGTTTTCTTTTAGTCTATCGTCAGGAGGACATCCT TTATTTAGACATGAAAGTTGAAGAAGCATTTAAATATATTATTTCTTGCGGAATGATTACACCTTCATTCCATCCTATTC AAAAAAAGCCCGATAGCACCCCTTCTTACGAATTAAATTCTCCTCCAATTTCTTTTCAAGAAACATAA
Upstream 100 bases:
>100_bases TGATGAAAGCTCAAACATTTGATAACAAATGTTTTAAACTATTCGATTATCTCATTTTTGTTTACAATGATTTTATCCAA GTATTTAATATATAGGACTC
Downstream 100 bases:
>100_bases GAGATATGAAAAAAAGTTTTTTGACTGGTTTTGCTATTTTATTTCCCGTGATACTCACTATCATTATCATTGGCTTTTTC ATCAACTTTTTGACTTATCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 235; Mature: 235
Protein sequence:
>235_residues MKKYFITGLVILLPAALTLGVVIFIFNLLTTPFLGIVKIVFEQYGLFERGFLFLNSEQLQNILAQILILTSLFFITILLG LIGRWFFFRSVIKFAEYLFKNIPLVNTIYNTCKDVIKTLFNSKANSFKQVVLVRFPNPSTYSIGFITKEGLLGLHNTPFE NSSIVFIPTTPNPTSGFLLVYRQEDILYLDMKVEEAFKYIISCGMITPSFHPIQKKPDSTPSYELNSPPISFQET
Sequences:
>Translated_235_residues MKKYFITGLVILLPAALTLGVVIFIFNLLTTPFLGIVKIVFEQYGLFERGFLFLNSEQLQNILAQILILTSLFFITILLG LIGRWFFFRSVIKFAEYLFKNIPLVNTIYNTCKDVIKTLFNSKANSFKQVVLVRFPNPSTYSIGFITKEGLLGLHNTPFE NSSIVFIPTTPNPTSGFLLVYRQEDILYLDMKVEEAFKYIISCGMITPSFHPIQKKPDSTPSYELNSPPISFQET >Mature_235_residues MKKYFITGLVILLPAALTLGVVIFIFNLLTTPFLGIVKIVFEQYGLFERGFLFLNSEQLQNILAQILILTSLFFITILLG LIGRWFFFRSVIKFAEYLFKNIPLVNTIYNTCKDVIKTLFNSKANSFKQVVLVRFPNPSTYSIGFITKEGLLGLHNTPFE NSSIVFIPTTPNPTSGFLLVYRQEDILYLDMKVEEAFKYIISCGMITPSFHPIQKKPDSTPSYELNSPPISFQET
Specific function: Unknown
COG id: COG2928
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26810; Mature: 26810
Theoretical pI: Translated: 9.25; Mature: 9.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKYFITGLVILLPAALTLGVVIFIFNLLTTPFLGIVKIVFEQYGLFERGFLFLNSEQLQ CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCEEEECHHHHH NILAQILILTSLFFITILLGLIGRWFFFRSVIKFAEYLFKNIPLVNTIYNTCKDVIKTLF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH NSKANSFKQVVLVRFPNPSTYSIGFITKEGLLGLHNTPFENSSIVFIPTTPNPTSGFLLV CCCCCCCEEEEEEECCCCCEEEEEEEECCCCCCCCCCCCCCCCEEEEECCCCCCCCEEEE YRQEDILYLDMKVEEAFKYIISCGMITPSFHPIQKKPDSTPSYELNSPPISFQET EECCCEEEEEEEHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCC >Mature Secondary Structure MKKYFITGLVILLPAALTLGVVIFIFNLLTTPFLGIVKIVFEQYGLFERGFLFLNSEQLQ CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCEEEECHHHHH NILAQILILTSLFFITILLGLIGRWFFFRSVIKFAEYLFKNIPLVNTIYNTCKDVIKTLF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH NSKANSFKQVVLVRFPNPSTYSIGFITKEGLLGLHNTPFENSSIVFIPTTPNPTSGFLLV CCCCCCCEEEEEEECCCCCEEEEEEEECCCCCCCCCCCCCCCCEEEEECCCCCCCCEEEE YRQEDILYLDMKVEEAFKYIISCGMITPSFHPIQKKPDSTPSYELNSPPISFQET EECCCEEEEEEEHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA