Definition Candidatus Protochlamydia amoebophila UWE25, complete genome.
Accession NC_005861
Length 2,414,465

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The map label for this gene is 46446667

Identifier: 46446667

GI number: 46446667

Start: 1222606

End: 1224594

Strand: Reverse

Name: 46446667

Synonym: pc1033

Alternate gene names: NA

Gene position: 1224594-1222606 (Counterclockwise)

Preceding gene: 46446668

Following gene: 46446666

Centisome position: 50.72

GC content: 39.27

Gene sequence:

>1989_bases
TTGAATATTTCTAATTTTGGGCTTAATTCTAGTTATCTTGTCAATACAACGAATCCATCTTACTATCCTCTTCAAGACAT
TAACGATCAACTTGAGAATGAAAATACTCCCTTAGACAATCCTTTGCCTAATCTAGAAGAAACTAGTGCGTCAACGATTC
AACCTTCCACTCTTTCACCTTCATCTGAAGAAGTTCAACTAAGCTTTCACGAGGGAACTTCTCTAACTATTTCTCCTTCT
CAGTTAGCTTTGTTAAGGGAAAAATCCCTTTATTTTAAAACTCTTTGGTCAGGAAATTTTCAAGAAACCCTGCAACACCC
TCTCGATTTAACAAAAAAAGACTTTACGCTTTTGCTCAATTTCCTGATGGACGCTAACTTTAAAGTTCCCTTAGAAGAGA
TTATTTCTGCCATTCAACTAACCGATTATTATGAACTAACAGAAGTAGTGAAGAATTTAGAAAAACAGCTGATGGAGGAA
TATAAATCTCAGAGATTTGAACCTTTTAACTCTACTGAAGAAAGTTTAGTCAGATTAAAAGAGATTTTAAGTTTCGCGCA
GCGCTGTCAATTAAATACATTGAAGAACTATTTAGAATTCACCGTTGTGAGCGAATTATTAAACAAGGCCTTTCTGTCGG
ATGAGTTTGGAAGAATTATAAATCATTTTTCAAATGAGATAAAAATTCTTAATCTTCCAAACAAAATTTTAAACAATGCC
TGTTTTTTAGCATTAAAAAGTTGTGAAAATTTAAAAGTACTTCATTTTAAGGAATGCAGGCATCTCACCGATGCAGGATT
AGCGCATTTAACACCCTTAACGGCTTTGCAGCATCTAGGTCTAGGCCAATGCTGGCGTCTCACCAATGCAGGATTAGCGC
ATTTAACACCCTTAACCGCTTTGCAGTATCTAAATCTAAGCGAATATAAGAATCTCACTGATGCAGGTTTAGCCCATTTG
ACACCCTTAACGGCTCTGCAGCATCTAGGTTTAAGCGGTTGTCAGAATCTCACGGATGCAGGATTAGCGCATTTAACACC
CTTAATGGGTTTACAGCATCTAGATTTAAGCGGTTGCCAGAATCTCACCGATGCAGGATTAGCCCATTTGACACCTTTAA
CGGGTTTGCAGCATCTAAATCTAAGCAGGTGCAATAAACTCACCGACGCAGGATTAGCACATTTGACACCTTTAACGGGT
TTGCAGCATCTTGATTTAAGCGGTTGCCAGAATCTCACCGATGCAGGATTAGCGCATTTGACACCTTTAACGGGTTTGCA
GCATCTTGATTTAAGCGGTTGCCAGAATCTCACCGATGCAGGATTAGCGCATTTGACACCTTTAACGGGTTTGCAGCATC
TTAATCTGTGTAATTGTAGAAAATTCACGGATAATGGATTAGCGCATTTAACACCCTTATCAGTTTTACAACATCTAAAT
CTAAGCAGGTGCAATAAACTCACTGATGTTGGATTAGCGCATTTAACACCCTTAACGGCTTTGCAGCATTTAGATCTGAG
TAGTTGCTATAATCTCACCGATGTAGGATTAGCGCATTTGACACCTTTAACGAGTTTGCAGCATCTAGGTTTAATCTCTT
GCGATAAACTTACCGATGCCGGATTAGTGCATTTGAAACTCTTAACGGGTTTGCAGCATCTAAATCTGAGCAATTGCAAG
AATCTCACGGATGCAGGATTAGCGCATTTGACACCCTTAACCGCTTTGCAGTATCTATATCTAAACTGGTGCAGGAAACT
CACTGATGCAGGATTAGCGCATTTAACATCCTTAACGGCTTTGCAGCATCTAGATTTGAGATATTGTCAAAATCTCACGG
ATGCAGGGTTAGCGCATTTGACACCCTTAACGGGTTTGCGGCATCTAGATTTAAGCCAATGCTGGCGTCTCACCAAAGCA
GGGTTAGCACGTTTTAAAACTTTAGCAGCTTCACTCAATCTAGAAATAAGGCTGGGTAGCTTTCCATAA

Upstream 100 bases:

>100_bases
CCTATTTTAACTTATTAATATTGCAATAATTTTATCTATAAATAATATTGTTAAAACATCTATAAAATGAAAATTTATTT
TACTCAGTGGGATGGTCATT

Downstream 100 bases:

>100_bases
AGAAGGTAACTAGGGCCAAAAATAAAAGAGTGAGTATTTTGTTTTAAAAAGTTAAGGGATAAAATTTCATTAAAGTTTAT
CAATTCTCGTTGAGACGCTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 662; Mature: 662

Protein sequence:

>662_residues
MNISNFGLNSSYLVNTTNPSYYPLQDINDQLENENTPLDNPLPNLEETSASTIQPSTLSPSSEEVQLSFHEGTSLTISPS
QLALLREKSLYFKTLWSGNFQETLQHPLDLTKKDFTLLLNFLMDANFKVPLEEIISAIQLTDYYELTEVVKNLEKQLMEE
YKSQRFEPFNSTEESLVRLKEILSFAQRCQLNTLKNYLEFTVVSELLNKAFLSDEFGRIINHFSNEIKILNLPNKILNNA
CFLALKSCENLKVLHFKECRHLTDAGLAHLTPLTALQHLGLGQCWRLTNAGLAHLTPLTALQYLNLSEYKNLTDAGLAHL
TPLTALQHLGLSGCQNLTDAGLAHLTPLMGLQHLDLSGCQNLTDAGLAHLTPLTGLQHLNLSRCNKLTDAGLAHLTPLTG
LQHLDLSGCQNLTDAGLAHLTPLTGLQHLDLSGCQNLTDAGLAHLTPLTGLQHLNLCNCRKFTDNGLAHLTPLSVLQHLN
LSRCNKLTDVGLAHLTPLTALQHLDLSSCYNLTDVGLAHLTPLTSLQHLGLISCDKLTDAGLVHLKLLTGLQHLNLSNCK
NLTDAGLAHLTPLTALQYLYLNWCRKLTDAGLAHLTSLTALQHLDLRYCQNLTDAGLAHLTPLTGLRHLDLSQCWRLTKA
GLARFKTLAASLNLEIRLGSFP

Sequences:

>Translated_662_residues
MNISNFGLNSSYLVNTTNPSYYPLQDINDQLENENTPLDNPLPNLEETSASTIQPSTLSPSSEEVQLSFHEGTSLTISPS
QLALLREKSLYFKTLWSGNFQETLQHPLDLTKKDFTLLLNFLMDANFKVPLEEIISAIQLTDYYELTEVVKNLEKQLMEE
YKSQRFEPFNSTEESLVRLKEILSFAQRCQLNTLKNYLEFTVVSELLNKAFLSDEFGRIINHFSNEIKILNLPNKILNNA
CFLALKSCENLKVLHFKECRHLTDAGLAHLTPLTALQHLGLGQCWRLTNAGLAHLTPLTALQYLNLSEYKNLTDAGLAHL
TPLTALQHLGLSGCQNLTDAGLAHLTPLMGLQHLDLSGCQNLTDAGLAHLTPLTGLQHLNLSRCNKLTDAGLAHLTPLTG
LQHLDLSGCQNLTDAGLAHLTPLTGLQHLDLSGCQNLTDAGLAHLTPLTGLQHLNLCNCRKFTDNGLAHLTPLSVLQHLN
LSRCNKLTDVGLAHLTPLTALQHLDLSSCYNLTDVGLAHLTPLTSLQHLGLISCDKLTDAGLVHLKLLTGLQHLNLSNCK
NLTDAGLAHLTPLTALQYLYLNWCRKLTDAGLAHLTSLTALQHLDLRYCQNLTDAGLAHLTPLTGLRHLDLSQCWRLTKA
GLARFKTLAASLNLEIRLGSFP
>Mature_662_residues
MNISNFGLNSSYLVNTTNPSYYPLQDINDQLENENTPLDNPLPNLEETSASTIQPSTLSPSSEEVQLSFHEGTSLTISPS
QLALLREKSLYFKTLWSGNFQETLQHPLDLTKKDFTLLLNFLMDANFKVPLEEIISAIQLTDYYELTEVVKNLEKQLMEE
YKSQRFEPFNSTEESLVRLKEILSFAQRCQLNTLKNYLEFTVVSELLNKAFLSDEFGRIINHFSNEIKILNLPNKILNNA
CFLALKSCENLKVLHFKECRHLTDAGLAHLTPLTALQHLGLGQCWRLTNAGLAHLTPLTALQYLNLSEYKNLTDAGLAHL
TPLTALQHLGLSGCQNLTDAGLAHLTPLMGLQHLDLSGCQNLTDAGLAHLTPLTGLQHLNLSRCNKLTDAGLAHLTPLTG
LQHLDLSGCQNLTDAGLAHLTPLTGLQHLDLSGCQNLTDAGLAHLTPLTGLQHLNLCNCRKFTDNGLAHLTPLSVLQHLN
LSRCNKLTDVGLAHLTPLTALQHLDLSSCYNLTDVGLAHLTPLTSLQHLGLISCDKLTDAGLVHLKLLTGLQHLNLSNCK
NLTDAGLAHLTPLTALQYLYLNWCRKLTDAGLAHLTSLTALQHLDLRYCQNLTDAGLAHLTPLTGLRHLDLSQCWRLTKA
GLARFKTLAASLNLEIRLGSFP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI22748931, Length=299, Percent_Identity=36.7892976588629, Blast_Score=149, Evalue=1e-35,
Organism=Homo sapiens, GI161333852, Length=474, Percent_Identity=27.0042194092827, Blast_Score=129, Evalue=1e-29,
Organism=Homo sapiens, GI284447308, Length=310, Percent_Identity=34.1935483870968, Blast_Score=125, Evalue=9e-29,
Organism=Homo sapiens, GI161333854, Length=463, Percent_Identity=26.5658747300216, Blast_Score=122, Evalue=9e-28,
Organism=Homo sapiens, GI27734755, Length=312, Percent_Identity=32.6923076923077, Blast_Score=110, Evalue=3e-24,
Organism=Homo sapiens, GI6912466, Length=288, Percent_Identity=30.9027777777778, Blast_Score=105, Evalue=1e-22,
Organism=Homo sapiens, GI296531375, Length=304, Percent_Identity=31.9078947368421, Blast_Score=99, Evalue=1e-20,
Organism=Homo sapiens, GI289666746, Length=282, Percent_Identity=33.3333333333333, Blast_Score=98, Evalue=3e-20,
Organism=Homo sapiens, GI284447314, Length=292, Percent_Identity=31.8493150684932, Blast_Score=95, Evalue=2e-19,
Organism=Caenorhabditis elegans, GI25151694, Length=307, Percent_Identity=30.6188925081433, Blast_Score=114, Evalue=1e-25,
Organism=Caenorhabditis elegans, GI25151696, Length=307, Percent_Identity=30.6188925081433, Blast_Score=114, Evalue=2e-25,
Organism=Saccharomyces cerevisiae, GI6322549, Length=335, Percent_Identity=27.7611940298507, Blast_Score=99, Evalue=3e-21,
Organism=Drosophila melanogaster, GI17647819, Length=301, Percent_Identity=35.8803986710963, Blast_Score=141, Evalue=2e-33,
Organism=Drosophila melanogaster, GI24662818, Length=294, Percent_Identity=34.3537414965986, Blast_Score=105, Evalue=1e-22,
Organism=Drosophila melanogaster, GI21357913, Length=261, Percent_Identity=32.9501915708812, Blast_Score=101, Evalue=2e-21,
Organism=Drosophila melanogaster, GI161076545, Length=338, Percent_Identity=28.698224852071, Blast_Score=94, Evalue=2e-19,
Organism=Drosophila melanogaster, GI161076547, Length=338, Percent_Identity=28.698224852071, Blast_Score=94, Evalue=3e-19,
Organism=Drosophila melanogaster, GI24652783, Length=338, Percent_Identity=28.698224852071, Blast_Score=94, Evalue=3e-19,
Organism=Drosophila melanogaster, GI161076549, Length=338, Percent_Identity=28.698224852071, Blast_Score=94, Evalue=3e-19,
Organism=Drosophila melanogaster, GI19921840, Length=385, Percent_Identity=28.5714285714286, Blast_Score=79, Evalue=1e-14,
Organism=Drosophila melanogaster, GI24646754, Length=270, Percent_Identity=30.7407407407407, Blast_Score=74, Evalue=3e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 73060; Mature: 73060

Theoretical pI: Translated: 6.57; Mature: 6.57

Prosite motif: PS50097 BTB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNISNFGLNSSYLVNTTNPSYYPLQDINDQLENENTPLDNPLPNLEETSASTIQPSTLSP
CCCCCCCCCCCEEEECCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
SSEEVQLSFHEGTSLTISPSQLALLREKSLYFKTLWSGNFQETLQHPLDLTKKDFTLLLN
CCCCEEEEEECCCEEEECHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHH
FLMDANFKVPLEEIISAIQLTDYYELTEVVKNLEKQLMEEYKSQRFEPFNSTEESLVRLK
HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH
EILSFAQRCQLNTLKNYLEFTVVSELLNKAFLSDEFGRIINHFSNEIKILNLPNKILNNA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHH
CFLALKSCENLKVLHFKECRHLTDAGLAHLTPLTALQHLGLGQCWRLTNAGLAHLTPLTA
HHHHHHCCCCCEEEEHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHCCCHHHHHHHHH
LQYLNLSEYKNLTDAGLAHLTPLTALQHLGLSGCQNLTDAGLAHLTPLMGLQHLDLSGCQ
HHHCCHHHHCCCHHHHHHHHHHHHHHHHCCHHHHCHHHHHHHHHHHHHHCCCCCCHHHCC
NLTDAGLAHLTPLTGLQHLNLSRCNKLTDAGLAHLTPLTGLQHLDLSGCQNLTDAGLAHL
CHHHCCHHHHHHHHCHHHCCHHHHHHHHHCCHHHHHHHCCCCCCCCHHCCCHHHCCHHHH
TPLTGLQHLDLSGCQNLTDAGLAHLTPLTGLQHLNLCNCRKFTDNGLAHLTPLSVLQHLN
HHHCCCCCCCCHHCCCHHHCCHHHHHHHHCHHHCCCHHCCCCCCCCCHHHCHHHHHHHCC
LSRCNKLTDVGLAHLTPLTALQHLDLSSCYNLTDVGLAHLTPLTSLQHLGLISCDKLTDA
HHHHHHHHHCCHHHHHHHHHHHHCCHHHHCCHHHHHHHHHHHHHHHHHCCCCCHHHHCCC
GLVHLKLLTGLQHLNLSNCKNLTDAGLAHLTPLTALQYLYLNWCRKLTDAGLAHLTSLTA
HHHHHHHHHHHHHCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LQHLDLRYCQNLTDAGLAHLTPLTGLRHLDLSQCWRLTKAGLARFKTLAASLNLEIRLGS
HHHHHHHHHCCCHHCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEECC
FP
CC
>Mature Secondary Structure
MNISNFGLNSSYLVNTTNPSYYPLQDINDQLENENTPLDNPLPNLEETSASTIQPSTLSP
CCCCCCCCCCCEEEECCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
SSEEVQLSFHEGTSLTISPSQLALLREKSLYFKTLWSGNFQETLQHPLDLTKKDFTLLLN
CCCCEEEEEECCCEEEECHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHH
FLMDANFKVPLEEIISAIQLTDYYELTEVVKNLEKQLMEEYKSQRFEPFNSTEESLVRLK
HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH
EILSFAQRCQLNTLKNYLEFTVVSELLNKAFLSDEFGRIINHFSNEIKILNLPNKILNNA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHH
CFLALKSCENLKVLHFKECRHLTDAGLAHLTPLTALQHLGLGQCWRLTNAGLAHLTPLTA
HHHHHHCCCCCEEEEHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHCCCHHHHHHHHH
LQYLNLSEYKNLTDAGLAHLTPLTALQHLGLSGCQNLTDAGLAHLTPLMGLQHLDLSGCQ
HHHCCHHHHCCCHHHHHHHHHHHHHHHHCCHHHHCHHHHHHHHHHHHHHCCCCCCHHHCC
NLTDAGLAHLTPLTGLQHLNLSRCNKLTDAGLAHLTPLTGLQHLDLSGCQNLTDAGLAHL
CHHHCCHHHHHHHHCHHHCCHHHHHHHHHCCHHHHHHHCCCCCCCCHHCCCHHHCCHHHH
TPLTGLQHLDLSGCQNLTDAGLAHLTPLTGLQHLNLCNCRKFTDNGLAHLTPLSVLQHLN
HHHCCCCCCCCHHCCCHHHCCHHHHHHHHCHHHCCCHHCCCCCCCCCHHHCHHHHHHHCC
LSRCNKLTDVGLAHLTPLTALQHLDLSSCYNLTDVGLAHLTPLTSLQHLGLISCDKLTDA
HHHHHHHHHCCHHHHHHHHHHHHCCHHHHCCHHHHHHHHHHHHHHHHHCCCCCHHHHCCC
GLVHLKLLTGLQHLNLSNCKNLTDAGLAHLTPLTALQYLYLNWCRKLTDAGLAHLTSLTA
HHHHHHHHHHHHHCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LQHLDLRYCQNLTDAGLAHLTPLTGLRHLDLSQCWRLTKAGLARFKTLAASLNLEIRLGS
HHHHHHHHHCCCHHCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEECC
FP
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA