| Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
|---|---|
| Accession | NC_005861 |
| Length | 2,414,465 |
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The map label for this gene is inlA [H]
Identifier: 46446666
GI number: 46446666
Start: 1220127
End: 1222331
Strand: Reverse
Name: inlA [H]
Synonym: pc1032
Alternate gene names: 46446666
Gene position: 1222331-1220127 (Counterclockwise)
Preceding gene: 46446667
Following gene: 46446665
Centisome position: 50.63
GC content: 40.05
Gene sequence:
>2205_bases TTGAATATTTCTAATTTTGGGTTTAATCCTAGTCAACTTGTCCCTACAACGGCTCCTTCTTACTATCCTCAAGAGATTAG TGATCCTCTTGTGGATGAAAACACTCCCTTAGACAATCCTTTGCCTAATCTAGAAGAAACCGGTGCCTCAACGATTCAAG CTCCCGCTCTTTCACTTTCATCTGATGAAATTCAACTAAGCTTTCAAGAGGGAACTTCTCTGACTATTTCTCACTCTCAG CTAGCTTTGTTAAGGGACAAATCGCCTTATTTTAAGAATCTGTGGTCGGGGCAATTTCAAGAAACCCTGCAACATCCTCT CGCTTTAATACAAAAAGACTTTACGCTTTTGCTTAATTGTGTCATGGATGCTAAATTTAAAGTTCCTTTGGAAGAGATCA CTTCTGCCATTCAACTAGCTGATTATTATGAACTAACAGAAGTGGTAACAAATTTAGAAGAACAGCTGATTGATGGATAC AAATCACAAAGATTTGAACCCTTTAACTCCACTGAAGAAAGTTTAGTCAGATTAAAAGAGATTTTAAATTTTGCGCAGCA ATGTCGATTAAACCCTTTGAAAAACTATTTAGAATTCACCGTTGTGAGCGCCTTATTAAACCAGACCTCTCAGTTAGAGA AGTTTGAAAAAATTGTAAATCACTTCTCAAAGAAGATAGAAACACTTAATTTTTCAGAAAATGCCCGTTTAACCGATGCC CATCTTTTAACATTAAAAAATTGTAAAAATTTAAAAATACTTCATTTTAAGAAATGTTGGGGTGTCACTGATGCAGGATT AGCGCATTTGACACCCTTAACGACTTTGCAGTATCTAGATCTAAGCGATTGCGAGAAACTCACTGATGATGGATTAGCGC ATTTGACACCTTTAACGGGCTTGCAGCATCTAGATCTAAGCTGGTGCAGCAGTCTTACCGATGCAGGATTAGCGCATTTA ACACCCTTAACGGCTTTGCAGCATCTAAATCTAAACAGATGCGAGTATCTCAAAGATGCAGGATTGGCGCATTTGACACC TTTAACGGGTTTGCAACATCTAAATCTAAATAGGTGCAAGGATCTCACCGATGCTGGATTATCCCATTTGAAACCCTTAA CCGCTTTGCAGCATCTAAATCTAAGCGAGTGTTGGAAACTTACCGATGCTGGATTAGCCCATTTGACACCTTTAACGGCT TTACAGCATTTAGATCTAAGCAGGTGTAACAGTCTTACCGATGCAGGATTAGCGCATTTAACACCCTTAACAGCTTTACA GCATCTAGATTTAAGCGATTGTCAAAATTTCACCGATGCAGGATTAGCGCATTTGACATCTTTGACGGGTTTGCAGTATC TAAATCTAAGCGAATATAAGAATCTCACTGATGCAGGTTTAGCCCATTTGACGCCCTTAACAGCTTTGCAGCATCTTAAT CTGTGTAATTGTAGAAAATTCACGGATAATGGATTAGCGCATTTGACGCCCTTAACAGCTTTGCAACACCTAGATCTGAG CCATTGTAAGAATCTCACTGATGATGGATTAGCCCATTTAGCACCTTTAACGGGCTTGCAGCGTCTAGTTCTAAGTTGGT GCGATAAGCTCACCGATGCAGGATTAGCCCATTTGACACCCCTAACGGCTTTGCAGTATTTAGATCTGAGCTGCTGTGAG ATCACCGATGCAGGATTAGCCCATTTGACACCTTTAACGGGCTTGCAGCATCTAGTTCTAGTCTATTGCTGGCAACTCAC CGATGCAGGATTAGCCCATTTAACACCCTTAACGACTTTGCAATATCTATATCTAGGCAGTTGCAATAGACTCACCGATG CAGGATTGGCCCATTTGGCACCTTTAACAGCTTTGCAGCATCTAGCTTTAAACGACTGTAGGAAACTTACCGATACAGGA TTAGCGCATTTAACACCCTTAACGGCTTTGCAGCATTTAACTCTAAACAGATGCGAGAAACTCACTGATGATGGATTAGC CCATTTGAAACCCTTAGCGGCTTTGCAGTATTTAGATCTGAGCTACTGTGAGATCACCGATGCTGGATTAGCCCATTTAA CACATTTAATGGCTTTACAACGTTTAGATCTATATGGGCGTGAGATCACTGATGATGGATTAGAACGTTTTGAAACTTTA GCAGCTTCATTTAATTTAGAAATAAGGCTGGATAGATTTCTATAA
Upstream 100 bases:
>100_bases CCTATTTTAACTTATTAATATTGCAATAATTTTTATCTATTCATCATATTGTTAAAATAGCTATAAATGAAAATTTATTT TATTCATTGGGATGGTCATT
Downstream 100 bases:
>100_bases AGAAGGAAACTAGGTCCAAAAATAAAAGAGTACTTTGTCCTAAGAGGATCAAGGATAAAATTTCATTAAAGTTGATCAAT TTTCATTGAGACGTTTCTCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 734; Mature: 734
Protein sequence:
>734_residues MNISNFGFNPSQLVPTTAPSYYPQEISDPLVDENTPLDNPLPNLEETGASTIQAPALSLSSDEIQLSFQEGTSLTISHSQ LALLRDKSPYFKNLWSGQFQETLQHPLALIQKDFTLLLNCVMDAKFKVPLEEITSAIQLADYYELTEVVTNLEEQLIDGY KSQRFEPFNSTEESLVRLKEILNFAQQCRLNPLKNYLEFTVVSALLNQTSQLEKFEKIVNHFSKKIETLNFSENARLTDA HLLTLKNCKNLKILHFKKCWGVTDAGLAHLTPLTTLQYLDLSDCEKLTDDGLAHLTPLTGLQHLDLSWCSSLTDAGLAHL TPLTALQHLNLNRCEYLKDAGLAHLTPLTGLQHLNLNRCKDLTDAGLSHLKPLTALQHLNLSECWKLTDAGLAHLTPLTA LQHLDLSRCNSLTDAGLAHLTPLTALQHLDLSDCQNFTDAGLAHLTSLTGLQYLNLSEYKNLTDAGLAHLTPLTALQHLN LCNCRKFTDNGLAHLTPLTALQHLDLSHCKNLTDDGLAHLAPLTGLQRLVLSWCDKLTDAGLAHLTPLTALQYLDLSCCE ITDAGLAHLTPLTGLQHLVLVYCWQLTDAGLAHLTPLTTLQYLYLGSCNRLTDAGLAHLAPLTALQHLALNDCRKLTDTG LAHLTPLTALQHLTLNRCEKLTDDGLAHLKPLAALQYLDLSYCEITDAGLAHLTHLMALQRLDLYGREITDDGLERFETL AASFNLEIRLDRFL
Sequences:
>Translated_734_residues MNISNFGFNPSQLVPTTAPSYYPQEISDPLVDENTPLDNPLPNLEETGASTIQAPALSLSSDEIQLSFQEGTSLTISHSQ LALLRDKSPYFKNLWSGQFQETLQHPLALIQKDFTLLLNCVMDAKFKVPLEEITSAIQLADYYELTEVVTNLEEQLIDGY KSQRFEPFNSTEESLVRLKEILNFAQQCRLNPLKNYLEFTVVSALLNQTSQLEKFEKIVNHFSKKIETLNFSENARLTDA HLLTLKNCKNLKILHFKKCWGVTDAGLAHLTPLTTLQYLDLSDCEKLTDDGLAHLTPLTGLQHLDLSWCSSLTDAGLAHL TPLTALQHLNLNRCEYLKDAGLAHLTPLTGLQHLNLNRCKDLTDAGLSHLKPLTALQHLNLSECWKLTDAGLAHLTPLTA LQHLDLSRCNSLTDAGLAHLTPLTALQHLDLSDCQNFTDAGLAHLTSLTGLQYLNLSEYKNLTDAGLAHLTPLTALQHLN LCNCRKFTDNGLAHLTPLTALQHLDLSHCKNLTDDGLAHLAPLTGLQRLVLSWCDKLTDAGLAHLTPLTALQYLDLSCCE ITDAGLAHLTPLTGLQHLVLVYCWQLTDAGLAHLTPLTTLQYLYLGSCNRLTDAGLAHLAPLTALQHLALNDCRKLTDTG LAHLTPLTALQHLTLNRCEKLTDDGLAHLKPLAALQYLDLSYCEITDAGLAHLTHLMALQRLDLYGREITDDGLERFETL AASFNLEIRLDRFL >Mature_734_residues MNISNFGFNPSQLVPTTAPSYYPQEISDPLVDENTPLDNPLPNLEETGASTIQAPALSLSSDEIQLSFQEGTSLTISHSQ LALLRDKSPYFKNLWSGQFQETLQHPLALIQKDFTLLLNCVMDAKFKVPLEEITSAIQLADYYELTEVVTNLEEQLIDGY KSQRFEPFNSTEESLVRLKEILNFAQQCRLNPLKNYLEFTVVSALLNQTSQLEKFEKIVNHFSKKIETLNFSENARLTDA HLLTLKNCKNLKILHFKKCWGVTDAGLAHLTPLTTLQYLDLSDCEKLTDDGLAHLTPLTGLQHLDLSWCSSLTDAGLAHL TPLTALQHLNLNRCEYLKDAGLAHLTPLTGLQHLNLNRCKDLTDAGLSHLKPLTALQHLNLSECWKLTDAGLAHLTPLTA LQHLDLSRCNSLTDAGLAHLTPLTALQHLDLSDCQNFTDAGLAHLTSLTGLQYLNLSEYKNLTDAGLAHLTPLTALQHLN LCNCRKFTDNGLAHLTPLTALQHLDLSHCKNLTDDGLAHLAPLTGLQRLVLSWCDKLTDAGLAHLTPLTALQYLDLSCCE ITDAGLAHLTPLTGLQHLVLVYCWQLTDAGLAHLTPLTTLQYLYLGSCNRLTDAGLAHLAPLTALQHLALNDCRKLTDTG LAHLTPLTALQHLTLNRCEKLTDDGLAHLKPLAALQYLDLSYCEITDAGLAHLTHLMALQRLDLYGREITDDGLERFETL AASFNLEIRLDRFL
Specific function: Mediates the entry of Listeria monocytogenes into cells [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Secreted, cell wall; Peptidoglycan-anchor [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 14 LRR (leucine-rich) repeats [H]
Homologues:
Organism=Homo sapiens, GI22748931, Length=343, Percent_Identity=33.2361516034985, Blast_Score=153, Evalue=6e-37, Organism=Homo sapiens, GI161333852, Length=457, Percent_Identity=27.5711159737418, Blast_Score=124, Evalue=3e-28, Organism=Homo sapiens, GI284447308, Length=335, Percent_Identity=32.2388059701493, Blast_Score=122, Evalue=9e-28, Organism=Homo sapiens, GI27734755, Length=398, Percent_Identity=28.894472361809, Blast_Score=121, Evalue=2e-27, Organism=Homo sapiens, GI161333854, Length=332, Percent_Identity=30.1204819277108, Blast_Score=110, Evalue=4e-24, Organism=Homo sapiens, GI296531375, Length=371, Percent_Identity=28.5714285714286, Blast_Score=106, Evalue=1e-22, Organism=Homo sapiens, GI6912466, Length=280, Percent_Identity=31.0714285714286, Blast_Score=105, Evalue=1e-22, Organism=Homo sapiens, GI289666746, Length=285, Percent_Identity=35.4385964912281, Blast_Score=100, Evalue=4e-21, Organism=Homo sapiens, GI284447314, Length=344, Percent_Identity=29.3604651162791, Blast_Score=96, Evalue=1e-19, Organism=Homo sapiens, GI16306588, Length=435, Percent_Identity=27.3563218390805, Blast_Score=67, Evalue=5e-11, Organism=Caenorhabditis elegans, GI25151694, Length=307, Percent_Identity=31.2703583061889, Blast_Score=109, Evalue=5e-24, Organism=Caenorhabditis elegans, GI25151696, Length=307, Percent_Identity=31.2703583061889, Blast_Score=109, Evalue=6e-24, Organism=Saccharomyces cerevisiae, GI6322549, Length=322, Percent_Identity=26.3975155279503, Blast_Score=80, Evalue=1e-15, Organism=Drosophila melanogaster, GI17647819, Length=300, Percent_Identity=36.3333333333333, Blast_Score=139, Evalue=9e-33, Organism=Drosophila melanogaster, GI24662818, Length=329, Percent_Identity=32.8267477203647, Blast_Score=105, Evalue=8e-23, Organism=Drosophila melanogaster, GI161076545, Length=392, Percent_Identity=29.3367346938776, Blast_Score=100, Evalue=3e-21, Organism=Drosophila melanogaster, GI24652783, Length=392, Percent_Identity=29.3367346938776, Blast_Score=100, Evalue=4e-21, Organism=Drosophila melanogaster, GI161076547, Length=392, Percent_Identity=29.3367346938776, Blast_Score=100, Evalue=4e-21, Organism=Drosophila melanogaster, GI161076549, Length=392, Percent_Identity=29.3367346938776, Blast_Score=100, Evalue=5e-21, Organism=Drosophila melanogaster, GI21357913, Length=266, Percent_Identity=31.9548872180451, Blast_Score=95, Evalue=2e-19, Organism=Drosophila melanogaster, GI19921840, Length=408, Percent_Identity=26.2254901960784, Blast_Score=72, Evalue=2e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014755 - InterPro: IPR019948 - InterPro: IPR014756 - InterPro: IPR001611 - InterPro: IPR013378 - InterPro: IPR019931 - InterPro: IPR012569 - InterPro: IPR001899 [H]
Pfam domain/function: PF09479 Flg_new; PF00746 Gram_pos_anchor; PF00560 LRR_1; PF08191 LRR_adjacent [H]
EC number: NA
Molecular weight: Translated: 81338; Mature: 81338
Theoretical pI: Translated: 5.67; Mature: 5.67
Prosite motif: PS00237 G_PROTEIN_RECEP_F1_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.0 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 3.0 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNISNFGFNPSQLVPTTAPSYYPQEISDPLVDENTPLDNPLPNLEETGASTIQAPALSLS CCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCC SDEIQLSFQEGTSLTISHSQLALLRDKSPYFKNLWSGQFQETLQHPLALIQKDFTLLLNC CCCEEEEECCCCEEEEECHHHHHHHCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH VMDAKFKVPLEEITSAIQLADYYELTEVVTNLEEQLIDGYKSQRFEPFNSTEESLVRLKE HHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH ILNFAQQCRLNPLKNYLEFTVVSALLNQTSQLEKFEKIVNHFSKKIETLNFSENARLTDA HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHH HLLTLKNCKNLKILHFKKCWGVTDAGLAHLTPLTTLQYLDLSDCEKLTDDGLAHLTPLTG HEEEECCCCCCEEEEEHHHCCCCCCCHHHHCHHHHHHHCCHHHHHHHHCCCHHHHHHHCC LQHLDLSWCSSLTDAGLAHLTPLTALQHLNLNRCEYLKDAGLAHLTPLTGLQHLNLNRCK CHHCCHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHCCCHHCCHHHCCCCCCHHHHH DLTDAGLSHLKPLTALQHLNLSECWKLTDAGLAHLTPLTALQHLDLSRCNSLTDAGLAHL HHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHCCHHHHCCHHHCCHHHH TPLTALQHLDLSDCQNFTDAGLAHLTSLTGLQYLNLSEYKNLTDAGLAHLTPLTALQHLN HHHHHHHHCCHHHHCCHHHHHHHHHHHHHHHHHCCHHHHCCCHHHHHHHHHHHHHHHHCC LCNCRKFTDNGLAHLTPLTALQHLDLSHCKNLTDDGLAHLAPLTGLQRLVLSWCDKLTDA HHHCCCCCCCCCHHHHHHHHHHHCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHC GLAHLTPLTALQYLDLSCCEITDAGLAHLTPLTGLQHLVLVYCWQLTDAGLAHLTPLTTL CHHHHHHHHHHHHCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH QYLYLGSCNRLTDAGLAHLAPLTALQHLALNDCRKLTDTGLAHLTPLTALQHLTLNRCEK HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH LTDDGLAHLKPLAALQYLDLSYCEITDAGLAHLTHLMALQRLDLYGREITDDGLERFETL HCCCCHHHHHHHHHHHHHCCHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH AASFNLEIRLDRFL HHHCCEEEEECCCC >Mature Secondary Structure MNISNFGFNPSQLVPTTAPSYYPQEISDPLVDENTPLDNPLPNLEETGASTIQAPALSLS CCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCC SDEIQLSFQEGTSLTISHSQLALLRDKSPYFKNLWSGQFQETLQHPLALIQKDFTLLLNC CCCEEEEECCCCEEEEECHHHHHHHCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH VMDAKFKVPLEEITSAIQLADYYELTEVVTNLEEQLIDGYKSQRFEPFNSTEESLVRLKE HHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH ILNFAQQCRLNPLKNYLEFTVVSALLNQTSQLEKFEKIVNHFSKKIETLNFSENARLTDA HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHH HLLTLKNCKNLKILHFKKCWGVTDAGLAHLTPLTTLQYLDLSDCEKLTDDGLAHLTPLTG HEEEECCCCCCEEEEEHHHCCCCCCCHHHHCHHHHHHHCCHHHHHHHHCCCHHHHHHHCC LQHLDLSWCSSLTDAGLAHLTPLTALQHLNLNRCEYLKDAGLAHLTPLTGLQHLNLNRCK CHHCCHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHCCCHHCCHHHCCCCCCHHHHH DLTDAGLSHLKPLTALQHLNLSECWKLTDAGLAHLTPLTALQHLDLSRCNSLTDAGLAHL HHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHCCHHHHCCHHHCCHHHH TPLTALQHLDLSDCQNFTDAGLAHLTSLTGLQYLNLSEYKNLTDAGLAHLTPLTALQHLN HHHHHHHHCCHHHHCCHHHHHHHHHHHHHHHHHCCHHHHCCCHHHHHHHHHHHHHHHHCC LCNCRKFTDNGLAHLTPLTALQHLDLSHCKNLTDDGLAHLAPLTGLQRLVLSWCDKLTDA HHHCCCCCCCCCHHHHHHHHHHHCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHC GLAHLTPLTALQYLDLSCCEITDAGLAHLTPLTGLQHLVLVYCWQLTDAGLAHLTPLTTL CHHHHHHHHHHHHCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH QYLYLGSCNRLTDAGLAHLAPLTALQHLALNDCRKLTDTGLAHLTPLTALQHLTLNRCEK HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH LTDDGLAHLKPLAALQYLDLSYCEITDAGLAHLTHLMALQRLDLYGREITDDGLERFETL HCCCCHHHHHHHHHHHHHCCHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH AASFNLEIRLDRFL HHHCCEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9541569 [H]