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The map label for this gene is ytfP [H]

Identifier: 46446644

GI number: 46446644

Start: 1204009

End: 1205259

Strand: Reverse

Name: ytfP [H]

Synonym: pc1010

Alternate gene names: 46446644

Gene position: 1205259-1204009 (Counterclockwise)

Preceding gene: 46446645

Following gene: 46446643

Centisome position: 49.92

GC content: 40.93

Gene sequence:

>1251_bases
GTGAAGCTGAAGATGAGTGATAAATCTTTGAATATTGTAGTTGTGGGAGGAGGAGCTGCTGGTTTTTTTGGAGCCATTTC
TTGCGCCCATCATTTTCCTCAACATCAAGTCATTCTTTTAGAAAAAACGCGTCAACCGCTTGCTAAGGTTCGCATTTCAG
GAGGGGGGCGTTGTAATGTGACGCATGCCTGTTTTGATCCTTCTATTTTGATTAAATCTTACCCAAGGGGAAGTCAAGAA
TTGAGAGGGCCTTTTACTCGTTTTCAACCAAAAGATACGATTGAATGGTTTGAAAATAGAGGAGTGAAACTCAAGGCAGA
AGAAGATGGTCGTATGTTTCCGGTAACAGACCAGTCAGAAACAATTATTGCTTGCCTACAGCAAGCTGCTCGAGAAGCTC
GTATAGATATTCGGCTTGAAAGAGGTGTCCAAAAAATCATTAAAGAGGAAAAAGGATTTACCCTACATCTTTCTAATGAA
GAAATTTTAATTTGTGATAAATTGTTAATGGCAACTGGAAGCGCTCCGAAACTTTATCCCTTACTGGAAGAATTAGGACA
TACCATTATCCCTCTCGTTCCCTCCCTTTTTACCTTTAATGTACCTGATTCTCCCTTGTTAGATTTAGCCGGCGTTTCAT
TACCTGTTGCGCAAGTTCGCCTTGTCGATGAAGGAATCATGCAGCAAGGTCCACTTTTACTCACACATTGGGGCTTTAGC
GGGCCAGCTGTTCTTAAGCTCTCAGCTTGGGCAGCTCGTGAACTTCACACTTTAAATTATAAAACCAAAATGGAAATCAA
TTGGCTTCCAAATTTATCTGAAGAAGAGATTAGGCTGACTTTTTCAAAAATGAAACGAAGCAACCCTGCTAAGTTAGTAA
TGTCGGAATCCTTGTTCGAATTACCTAAACAATTGTGGAAGAGGCTTGCTCAATTATCTAGTATTGATACTGATTTAAGA
TGGGCGATGCTTTCCAATAAACACCTTTCTTCTTTCATAACCTATTTGCGCGCTAGCCCATTTTTAATTCAGGGCAAAAC
TACTTATAAACAAGAATTTGTCACTTGCGGTGGAGTGGCTTTAAATGAAGTCAATTTTAAAACACTCGAAAGTCGCCGTT
GCCCCCATCTTTTCTTTGCTGGAGAAATTCTCAACATCGATGGGATCACTGGAGGATTCAATTTCCAAAATGCCTGGACG
ACCGGATGGATTGCTGGTTGTTCAATGGGAATGCCGACATCCGTCCTCTAG

Upstream 100 bases:

>100_bases
GAAAAACAGCTAGAATATACTCAAGAAAAACAATTACTGGAAAATGCATTAATGACTTCTATGGAAAAATGGGAAACAGC
AAGTTTGGAATTGCAACAAA

Downstream 100 bases:

>100_bases
TTTTCTGCTTCTTTTTTAAAAATTTTTTCTTCTTTTTAGCGATTATGAATAAAATTTAAAACCTAAATTATTTACTAAAA
ATCATAGGCGCAAAAAATTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 416; Mature: 416

Protein sequence:

>416_residues
MKLKMSDKSLNIVVVGGGAAGFFGAISCAHHFPQHQVILLEKTRQPLAKVRISGGGRCNVTHACFDPSILIKSYPRGSQE
LRGPFTRFQPKDTIEWFENRGVKLKAEEDGRMFPVTDQSETIIACLQQAAREARIDIRLERGVQKIIKEEKGFTLHLSNE
EILICDKLLMATGSAPKLYPLLEELGHTIIPLVPSLFTFNVPDSPLLDLAGVSLPVAQVRLVDEGIMQQGPLLLTHWGFS
GPAVLKLSAWAARELHTLNYKTKMEINWLPNLSEEEIRLTFSKMKRSNPAKLVMSESLFELPKQLWKRLAQLSSIDTDLR
WAMLSNKHLSSFITYLRASPFLIQGKTTYKQEFVTCGGVALNEVNFKTLESRRCPHLFFAGEILNIDGITGGFNFQNAWT
TGWIAGCSMGMPTSVL

Sequences:

>Translated_416_residues
MKLKMSDKSLNIVVVGGGAAGFFGAISCAHHFPQHQVILLEKTRQPLAKVRISGGGRCNVTHACFDPSILIKSYPRGSQE
LRGPFTRFQPKDTIEWFENRGVKLKAEEDGRMFPVTDQSETIIACLQQAAREARIDIRLERGVQKIIKEEKGFTLHLSNE
EILICDKLLMATGSAPKLYPLLEELGHTIIPLVPSLFTFNVPDSPLLDLAGVSLPVAQVRLVDEGIMQQGPLLLTHWGFS
GPAVLKLSAWAARELHTLNYKTKMEINWLPNLSEEEIRLTFSKMKRSNPAKLVMSESLFELPKQLWKRLAQLSSIDTDLR
WAMLSNKHLSSFITYLRASPFLIQGKTTYKQEFVTCGGVALNEVNFKTLESRRCPHLFFAGEILNIDGITGGFNFQNAWT
TGWIAGCSMGMPTSVL
>Mature_416_residues
MKLKMSDKSLNIVVVGGGAAGFFGAISCAHHFPQHQVILLEKTRQPLAKVRISGGGRCNVTHACFDPSILIKSYPRGSQE
LRGPFTRFQPKDTIEWFENRGVKLKAEEDGRMFPVTDQSETIIACLQQAAREARIDIRLERGVQKIIKEEKGFTLHLSNE
EILICDKLLMATGSAPKLYPLLEELGHTIIPLVPSLFTFNVPDSPLLDLAGVSLPVAQVRLVDEGIMQQGPLLLTHWGFS
GPAVLKLSAWAARELHTLNYKTKMEINWLPNLSEEEIRLTFSKMKRSNPAKLVMSESLFELPKQLWKRLAQLSSIDTDLR
WAMLSNKHLSSFITYLRASPFLIQGKTTYKQEFVTCGGVALNEVNFKTLESRRCPHLFFAGEILNIDGITGGFNFQNAWT
TGWIAGCSMGMPTSVL

Specific function: Unknown

COG id: COG2081

COG function: function code R; Predicted flavoproteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI2367234, Length=384, Percent_Identity=31.25, Blast_Score=171, Evalue=7e-44,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004792
- InterPro:   IPR013027 [H]

Pfam domain/function: PF03486 HI0933_like [H]

EC number: NA

Molecular weight: Translated: 46484; Mature: 46484

Theoretical pI: Translated: 8.91; Mature: 8.91

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLKMSDKSLNIVVVGGGAAGFFGAISCAHHFPQHQVILLEKTRQPLAKVRISGGGRCNV
CEEEECCCCEEEEEECCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCEEEEECCCCEEEE
THACFDPSILIKSYPRGSQELRGPFTRFQPKDTIEWFENRGVKLKAEEDGRMFPVTDQSE
EEECCCCCCCEECCCCCCHHHCCCCCCCCCCHHHHHHHCCCEEEEECCCCCEECCCCCCH
TIIACLQQAAREARIDIRLERGVQKIIKEEKGFTLHLSNEEILICDKLLMATGSAPKLYP
HHHHHHHHHHHHHEEEEEHHHHHHHHHHHCCCCEEEECCCCEEEEEHHHHHCCCCCHHHH
LLEELGHTIIPLVPSLFTFNVPDSPLLDLAGVSLPVAQVRLVDEGIMQQGPLLLTHWGFS
HHHHCCCHHHHHCCHHEEECCCCCCCHHHCCCCCCHHHHEEHHHHHHCCCCEEEEECCCC
GPAVLKLSAWAARELHTLNYKTKMEINWLPNLSEEEIRLTFSKMKRSNPAKLVMSESLFE
CCEEEEEEHHHHHHHEECCCEEEEEEEECCCCCHHHHHEEHHHHCCCCCHHHHHHHHHHH
LPKQLWKRLAQLSSIDTDLRWAMLSNKHLSSFITYLRASPFLIQGKTTYKQEFVTCGGVA
HHHHHHHHHHHHHCCCCCCEEEHHCCHHHHHHHHHHCCCCEEEECCCHHHHHHHEECCEE
LNEVNFKTLESRRCPHLFFAGEILNIDGITGGFNFQNAWTTGWIAGCSMGMPTSVL
EECCCHHHHHCCCCCEEEEECEEEEECCCCCCCCCCCCCCCHHHHHCCCCCCCCCC
>Mature Secondary Structure
MKLKMSDKSLNIVVVGGGAAGFFGAISCAHHFPQHQVILLEKTRQPLAKVRISGGGRCNV
CEEEECCCCEEEEEECCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCEEEEECCCCEEEE
THACFDPSILIKSYPRGSQELRGPFTRFQPKDTIEWFENRGVKLKAEEDGRMFPVTDQSE
EEECCCCCCCEECCCCCCHHHCCCCCCCCCCHHHHHHHCCCEEEEECCCCCEECCCCCCH
TIIACLQQAAREARIDIRLERGVQKIIKEEKGFTLHLSNEEILICDKLLMATGSAPKLYP
HHHHHHHHHHHHHEEEEEHHHHHHHHHHHCCCCEEEECCCCEEEEEHHHHHCCCCCHHHH
LLEELGHTIIPLVPSLFTFNVPDSPLLDLAGVSLPVAQVRLVDEGIMQQGPLLLTHWGFS
HHHHCCCHHHHHCCHHEEECCCCCCCHHHCCCCCCHHHHEEHHHHHHCCCCEEEEECCCC
GPAVLKLSAWAARELHTLNYKTKMEINWLPNLSEEEIRLTFSKMKRSNPAKLVMSESLFE
CCEEEEEEHHHHHHHEECCCEEEEEEEECCCCCHHHHHEEHHHHCCCCCHHHHHHHHHHH
LPKQLWKRLAQLSSIDTDLRWAMLSNKHLSSFITYLRASPFLIQGKTTYKQEFVTCGGVA
HHHHHHHHHHHHHCCCCCCEEEHHCCHHHHHHHHHHCCCCEEEECCCHHHHHHHEECCEE
LNEVNFKTLESRRCPHLFFAGEILNIDGITGGFNFQNAWTTGWIAGCSMGMPTSVL
EECCCHHHHHCCCCCEEEEECEEEEECCCCCCCCCCCCCCCHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377 [H]