Definition Candidatus Protochlamydia amoebophila UWE25, complete genome.
Accession NC_005861
Length 2,414,465

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The map label for this gene is 46446630

Identifier: 46446630

GI number: 46446630

Start: 1189601

End: 1189942

Strand: Reverse

Name: 46446630

Synonym: pc0996

Alternate gene names: NA

Gene position: 1189942-1189601 (Counterclockwise)

Preceding gene: 46446631

Following gene: 46446629

Centisome position: 49.28

GC content: 39.18

Gene sequence:

>342_bases
ATGGAAGAGATCGATATTGAAATCTACGAAACCGCTAATGGTAAACGACCCTTTGAGATTTGGATCAAGGAAATCAAAGA
AATCCATACAAGGGCTAAAATTTTAACCCGGTTAGACCGATTGAAGCTTGGGAATTTTGGAGATTGTAAAACCTTGCAAA
AGGGGGTACATGAGCTTCGTATTCATTACGGCCCGGGCATTAGGATTTATTATGGAAAGATTGGAAACAAAGTCATCTTG
CTTCTTTGCGGTGGTGATAAAGGATCTCAGGACAAGGACATTGCAAAAGCAATGGAGTATTTGAAGGATTATCAATCTAG
GGAGTTAAGTTATGGCAAGTAA

Upstream 100 bases:

>100_bases
CTTTTTCAAAGGTTGTTTCCCAAGATATTGGCGAAATTCTCAAAATTTATAGGTTAAAATTTACTTGAATTATTGTATCC
TAAAAGATACAATAAGCTAT

Downstream 100 bases:

>100_bases
TAAGAAGTATCAAGATTTTCTCTTAGAACAGCTAAAGGATCATGACGAGGCTGTTGCCTATCTAAATGCTGCTTTAGAAG
AAAGCCTGAAGGGCGACGAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 113; Mature: 113

Protein sequence:

>113_residues
MEEIDIEIYETANGKRPFEIWIKEIKEIHTRAKILTRLDRLKLGNFGDCKTLQKGVHELRIHYGPGIRIYYGKIGNKVIL
LLCGGDKGSQDKDIAKAMEYLKDYQSRELSYGK

Sequences:

>Translated_113_residues
MEEIDIEIYETANGKRPFEIWIKEIKEIHTRAKILTRLDRLKLGNFGDCKTLQKGVHELRIHYGPGIRIYYGKIGNKVIL
LLCGGDKGSQDKDIAKAMEYLKDYQSRELSYGK
>Mature_113_residues
MEEIDIEIYETANGKRPFEIWIKEIKEIHTRAKILTRLDRLKLGNFGDCKTLQKGVHELRIHYGPGIRIYYGKIGNKVIL
LLCGGDKGSQDKDIAKAMEYLKDYQSRELSYGK

Specific function: Unknown

COG id: COG3657

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014056
- InterPro:   IPR009241 [H]

Pfam domain/function: PF05973 Gp49 [H]

EC number: NA

Molecular weight: Translated: 13088; Mature: 13088

Theoretical pI: Translated: 9.31; Mature: 9.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEEIDIEIYETANGKRPFEIWIKEIKEIHTRAKILTRLDRLKLGNFGDCKTLQKGVHELR
CCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHEE
IHYGPGIRIYYGKIGNKVILLLCGGDKGSQDKDIAKAMEYLKDYQSRELSYGK
EEECCCEEEEEECCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MEEIDIEIYETANGKRPFEIWIKEIKEIHTRAKILTRLDRLKLGNFGDCKTLQKGVHELR
CCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHEE
IHYGPGIRIYYGKIGNKVILLLCGGDKGSQDKDIAKAMEYLKDYQSRELSYGK
EEECCCEEEEEECCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]