| Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
|---|---|
| Accession | NC_005861 |
| Length | 2,414,465 |
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The map label for this gene is 46446629
Identifier: 46446629
GI number: 46446629
Start: 1189309
End: 1189611
Strand: Reverse
Name: 46446629
Synonym: pc0995
Alternate gene names: NA
Gene position: 1189611-1189309 (Counterclockwise)
Preceding gene: 46446630
Following gene: 46446628
Centisome position: 49.27
GC content: 41.58
Gene sequence:
>303_bases ATGGCAAGTAATAAGAAGTATCAAGATTTTCTCTTAGAACAGCTAAAGGATCATGACGAGGCTGTTGCCTATCTAAATGC TGCTTTAGAAGAAAGCCTGAAGGGCGACGAAGAGTCGCAACAAGTTTTTTTGATTGCTCTTCGCAATGTAGCGGAAGCAC AAGGTGGGATTGGAGCTTTAGCCAAAAAAGCGCATGTCGGCCGTGAAAGCCTTTACAAAACACTTTCAGGCGCTGGAAAC CCTAAATGGCATACCTTGGTTTCTTTGTGTATGGCTATGGGATTAAATTTAAGATTAACTTAA
Upstream 100 bases:
>100_bases GTCATCTTGCTTCTTTGCGGTGGTGATAAAGGATCTCAGGACAAGGACATTGCAAAAGCAATGGAGTATTTGAAGGATTA TCAATCTAGGGAGTTAAGTT
Downstream 100 bases:
>100_bases TTATTGAAGGGAAAGTTATGGCTAAAAAATTTAGCTGATGTACTCAACAGTGATTATAGACAATTTTTATAGGGATCAGC TTACTGGAATATAGGTTGTA
Product: hypothetical protein
Products: NA
Alternate protein names: Addiction Module Antidote Protein
Number of amino acids: Translated: 100; Mature: 99
Protein sequence:
>100_residues MASNKKYQDFLLEQLKDHDEAVAYLNAALEESLKGDEESQQVFLIALRNVAEAQGGIGALAKKAHVGRESLYKTLSGAGN PKWHTLVSLCMAMGLNLRLT
Sequences:
>Translated_100_residues MASNKKYQDFLLEQLKDHDEAVAYLNAALEESLKGDEESQQVFLIALRNVAEAQGGIGALAKKAHVGRESLYKTLSGAGN PKWHTLVSLCMAMGLNLRLT >Mature_99_residues ASNKKYQDFLLEQLKDHDEAVAYLNAALEESLKGDEESQQVFLIALRNVAEAQGGIGALAKKAHVGRESLYKTLSGAGNP KWHTLVSLCMAMGLNLRLT
Specific function: Unknown
COG id: COG3636
COG function: function code K; Predicted transcriptional regulator
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10931; Mature: 10799
Theoretical pI: Translated: 6.79; Mature: 6.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASNKKYQDFLLEQLKDHDEAVAYLNAALEESLKGDEESQQVFLIALRNVAEAQGGIGAL CCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCHHHH AKKAHVGRESLYKTLSGAGNPKWHTLVSLCMAMGLNLRLT HHHHHCCHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure ASNKKYQDFLLEQLKDHDEAVAYLNAALEESLKGDEESQQVFLIALRNVAEAQGGIGAL CCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCHHHH AKKAHVGRESLYKTLSGAGNPKWHTLVSLCMAMGLNLRLT HHHHHCCHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA