Definition Candidatus Protochlamydia amoebophila UWE25, complete genome.
Accession NC_005861
Length 2,414,465

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The map label for this gene is 46446602

Identifier: 46446602

GI number: 46446602

Start: 1162956

End: 1163726

Strand: Reverse

Name: 46446602

Synonym: pc0968

Alternate gene names: NA

Gene position: 1163726-1162956 (Counterclockwise)

Preceding gene: 46446603

Following gene: 46446601

Centisome position: 48.2

GC content: 32.17

Gene sequence:

>771_bases
ATGAATCTTTGTGTCGATATTGTTAATTCTTATCAAGAGCTTAGTAAAGATGTCCATGTCAGTAAAGAAACAGGTCTTCC
TGGTATTACAGATGAGGTGGCACAAAAATTTTTGAACCGAATCGGTTCATCGGCTTCTTTTTCACACATGAGTATTTCAG
TTAGTATGACCACACAAATTCCTTTGGATCTTTGCTATAGTCTTTATAAATTTTATTTTTACCAAATTAAAAAGATTAAT
GATTTAACAGATGAAAATGCCATTTTAATACAGCTTGACAAAACTAAACAAATTGCGGATAAAGCTATTAAAGAATTTCG
AGAATGTATGAAATTAATTGATGTAGGCGTAACACGAGAAATGGCCAAAGTTTTACCAAATTTCCTGTTAAATTATTTGT
ATGGGACTGAATTTGTGAAATTAACAGGTAAAATAAATCCAGGCTGCCAAATTGAAGAATTGACAAATTATTTTATTAGT
CAAGTGCCTGAAACAAAGCTGGTCAATTTCCGCTTAGTTATTCAAAAAATGCGAAATATACATCTACCTTCTAACTTGTG
GGCCATCGATGATTATAGACACAAAGTACCAAAACAAACAATGATACCAGCTGAAGTTTTTGCCAGGGTTCATCATCGAG
CAATGGAAGATATGGTGCATCTATTTCATCAACATGCCGCTAATTTTGTAGATAAAATGCTAATAGATGAATTTTTTGAG
GATTTCCCGGTTTTTCAAATCAATAAAGAAAGAGTAAGAGAGTTTATATGA

Upstream 100 bases:

>100_bases
TATCAAACCTTGAGTTTCAAAAACGAAAGTAATGATAAAATAAATTTTGAAAAAACAACTTGAATTTTTAACAAAAATGT
ATGATTAATTGGAGGAAATT

Downstream 100 bases:

>100_bases
ATAATATTGATTTATGTGATAATAACAACAAACATTATTTAGCTGGTTATCAAAGTTGTCAAGAACAGGCATCCACACAA
AAAAATATACAAACGACTTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 256; Mature: 256

Protein sequence:

>256_residues
MNLCVDIVNSYQELSKDVHVSKETGLPGITDEVAQKFLNRIGSSASFSHMSISVSMTTQIPLDLCYSLYKFYFYQIKKIN
DLTDENAILIQLDKTKQIADKAIKEFRECMKLIDVGVTREMAKVLPNFLLNYLYGTEFVKLTGKINPGCQIEELTNYFIS
QVPETKLVNFRLVIQKMRNIHLPSNLWAIDDYRHKVPKQTMIPAEVFARVHHRAMEDMVHLFHQHAANFVDKMLIDEFFE
DFPVFQINKERVREFI

Sequences:

>Translated_256_residues
MNLCVDIVNSYQELSKDVHVSKETGLPGITDEVAQKFLNRIGSSASFSHMSISVSMTTQIPLDLCYSLYKFYFYQIKKIN
DLTDENAILIQLDKTKQIADKAIKEFRECMKLIDVGVTREMAKVLPNFLLNYLYGTEFVKLTGKINPGCQIEELTNYFIS
QVPETKLVNFRLVIQKMRNIHLPSNLWAIDDYRHKVPKQTMIPAEVFARVHHRAMEDMVHLFHQHAANFVDKMLIDEFFE
DFPVFQINKERVREFI
>Mature_256_residues
MNLCVDIVNSYQELSKDVHVSKETGLPGITDEVAQKFLNRIGSSASFSHMSISVSMTTQIPLDLCYSLYKFYFYQIKKIN
DLTDENAILIQLDKTKQIADKAIKEFRECMKLIDVGVTREMAKVLPNFLLNYLYGTEFVKLTGKINPGCQIEELTNYFIS
QVPETKLVNFRLVIQKMRNIHLPSNLWAIDDYRHKVPKQTMIPAEVFARVHHRAMEDMVHLFHQHAANFVDKMLIDEFFE
DFPVFQINKERVREFI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29862; Mature: 29862

Theoretical pI: Translated: 7.01; Mature: 7.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLCVDIVNSYQELSKDVHVSKETGLPGITDEVAQKFLNRIGSSASFSHMSISVSMTTQI
CCHHHHHHHHHHHHHHHCCCCHHCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEEEEECCC
PLDLCYSLYKFYFYQIKKINDLTDENAILIQLDKTKQIADKAIKEFRECMKLIDVGVTRE
CHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHCCHHHH
MAKVLPNFLLNYLYGTEFVKLTGKINPGCQIEELTNYFISQVPETKLVNFRLVIQKMRNI
HHHHHHHHHHHHHHCCHHEEEECCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCC
HLPSNLWAIDDYRHKVPKQTMIPAEVFARVHHRAMEDMVHLFHQHAANFVDKMLIDEFFE
CCCCCCEEECHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DFPVFQINKERVREFI
HCCCEEECHHHHHHCC
>Mature Secondary Structure
MNLCVDIVNSYQELSKDVHVSKETGLPGITDEVAQKFLNRIGSSASFSHMSISVSMTTQI
CCHHHHHHHHHHHHHHHCCCCHHCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEEEEECCC
PLDLCYSLYKFYFYQIKKINDLTDENAILIQLDKTKQIADKAIKEFRECMKLIDVGVTRE
CHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHCCHHHH
MAKVLPNFLLNYLYGTEFVKLTGKINPGCQIEELTNYFISQVPETKLVNFRLVIQKMRNI
HHHHHHHHHHHHHHCCHHEEEECCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCC
HLPSNLWAIDDYRHKVPKQTMIPAEVFARVHHRAMEDMVHLFHQHAANFVDKMLIDEFFE
CCCCCCEEECHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DFPVFQINKERVREFI
HCCCEEECHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA