Definition Candidatus Protochlamydia amoebophila UWE25, complete genome.
Accession NC_005861
Length 2,414,465

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The map label for this gene is 46446601

Identifier: 46446601

GI number: 46446601

Start: 1162594

End: 1162959

Strand: Reverse

Name: 46446601

Synonym: pc0967

Alternate gene names: NA

Gene position: 1162959-1162594 (Counterclockwise)

Preceding gene: 46446602

Following gene: 46446600

Centisome position: 48.17

GC content: 27.87

Gene sequence:

>366_bases
ATGAATAATATTGATTTATGTGATAATAACAACAAACATTATTTAGCTGGTTATCAAAGTTGTCAAGAACAGGCATCCAC
ACAAAAAAATATACAAACGACTTCTCTTTTTAGGTCGTTTAAATTTAGGGCAACTGTTACTTTATTCAAAATAGTAGATA
TTGTTTATCCTATATTTAAAATTTTCTTTCAGGTGCTTGAATGCGTTGGCCGTTATAGCTATTCATTAGTAAATGGACTT
ATTTCAATTAAAACTAAGTTTATAGGGATTGATTTTCACTTTTATTTCAATATTAATATTAATTATGATTACTCTAATAC
ACAAAATTTACAGAATGCTGGTCCTGAACGCGCTTTGCTTTGCTAA

Upstream 100 bases:

>100_bases
ATCAACATGCCGCTAATTTTGTAGATAAAATGCTAATAGATGAATTTTTTGAGGATTTCCCGGTTTTTCAAATCAATAAA
GAAAGAGTAAGAGAGTTTAT

Downstream 100 bases:

>100_bases
TTTTACGAGAGTATATTTTATTAGAATACCGCTAAATTAGAAATTTTTTGACAAATGAGAAATAATTACTGAACTATTAA
ATATTTTTTTACTGGACGTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 121; Mature: 121

Protein sequence:

>121_residues
MNNIDLCDNNNKHYLAGYQSCQEQASTQKNIQTTSLFRSFKFRATVTLFKIVDIVYPIFKIFFQVLECVGRYSYSLVNGL
ISIKTKFIGIDFHFYFNININYDYSNTQNLQNAGPERALLC

Sequences:

>Translated_121_residues
MNNIDLCDNNNKHYLAGYQSCQEQASTQKNIQTTSLFRSFKFRATVTLFKIVDIVYPIFKIFFQVLECVGRYSYSLVNGL
ISIKTKFIGIDFHFYFNININYDYSNTQNLQNAGPERALLC
>Mature_121_residues
MNNIDLCDNNNKHYLAGYQSCQEQASTQKNIQTTSLFRSFKFRATVTLFKIVDIVYPIFKIFFQVLECVGRYSYSLVNGL
ISIKTKFIGIDFHFYFNININYDYSNTQNLQNAGPERALLC

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14077; Mature: 14077

Theoretical pI: Translated: 8.60; Mature: 8.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.3 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
3.3 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNIDLCDNNNKHYLAGYQSCQEQASTQKNIQTTSLFRSFKFRATVTLFKIVDIVYPIFK
CCCCCCCCCCCCEEEHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IFFQVLECVGRYSYSLVNGLISIKTKFIGIDFHFYFNININYDYSNTQNLQNAGPERALL
HHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEEEEEEECCCCCCCHHHCCCCCCCC
C
C
>Mature Secondary Structure
MNNIDLCDNNNKHYLAGYQSCQEQASTQKNIQTTSLFRSFKFRATVTLFKIVDIVYPIFK
CCCCCCCCCCCCEEEHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IFFQVLECVGRYSYSLVNGLISIKTKFIGIDFHFYFNININYDYSNTQNLQNAGPERALL
HHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEEEEEEECCCCCCCHHHCCCCCCCC
C
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA