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The map label for this gene is dcd

Identifier: 46446592

GI number: 46446592

Start: 1155529

End: 1156095

Strand: Reverse

Name: dcd

Synonym: pc0958

Alternate gene names: 46446592

Gene position: 1156095-1155529 (Counterclockwise)

Preceding gene: 46446594

Following gene: 46446591

Centisome position: 47.88

GC content: 35.98

Gene sequence:

>567_bases
ATGAGTATTTGTTCGGATAATTGGATTATAGAGAAATGTCTTAAAGAGAAAATGATTGAGCCTTTTGTAGATAAGCAAGT
GCGATTTGAGAATGGAGAGAAAATTATTTCTTATGGAGTTTCTTCTTATGGTTACGATATTCGAGTTTCAAACCAATTTC
AAATATTTACTAATGTTTACGGTTCTATTGTAGACCCTAAGCAATTTGACACAAAAAGTCTTGTAAAAATAGAAGATGAT
GTGTGCGTTATTCCTCCTAATAGCTTTGCGCTAGCAATAACTTTGGAATATTTTCGCATCCCTGAAAATGTTTTGACGAT
TTGTGTGGGAAAATCCACATATGCCCGTTGTGGAATTATTGTCAACGTTACTCCATTCGAACCTGGCTGGGAAGGATATG
CTGTCTTAGAAATTTCAAACACAACACCACTTCCGGCCAAAATATATGCCGGAGAGGGAATTGCACAAGTCCTGTTTTTT
GAAGGAAAAGAGAAATGTTTGTATACATATGCTGCTAGAAATGGGAAGTATCATCGGCAAATGACACTGACGTTGCCTTT
ACTATAA

Upstream 100 bases:

>100_bases
CAATCTAGCATACCATTAAAATTTTCATTTTTACTAGTGACAAGAGCGGAAGATTTTTTTACACTGAAATGAATTGTTAA
TATCTTAACCAGGAATCGCA

Downstream 100 bases:

>100_bases
ATTATAATGGAAACCTTAATGAATCCTACTCCTCCATTTATTCTTCCTACCATTGTCGATGGAGAAGATAAAAGCTCACT
ATTGACGAATCGCATACGAA

Product: deoxycytidine triphosphate deaminase

Products: NA

Alternate protein names: dCTP deaminase

Number of amino acids: Translated: 188; Mature: 187

Protein sequence:

>188_residues
MSICSDNWIIEKCLKEKMIEPFVDKQVRFENGEKIISYGVSSYGYDIRVSNQFQIFTNVYGSIVDPKQFDTKSLVKIEDD
VCVIPPNSFALAITLEYFRIPENVLTICVGKSTYARCGIIVNVTPFEPGWEGYAVLEISNTTPLPAKIYAGEGIAQVLFF
EGKEKCLYTYAARNGKYHRQMTLTLPLL

Sequences:

>Translated_188_residues
MSICSDNWIIEKCLKEKMIEPFVDKQVRFENGEKIISYGVSSYGYDIRVSNQFQIFTNVYGSIVDPKQFDTKSLVKIEDD
VCVIPPNSFALAITLEYFRIPENVLTICVGKSTYARCGIIVNVTPFEPGWEGYAVLEISNTTPLPAKIYAGEGIAQVLFF
EGKEKCLYTYAARNGKYHRQMTLTLPLL
>Mature_187_residues
SICSDNWIIEKCLKEKMIEPFVDKQVRFENGEKIISYGVSSYGYDIRVSNQFQIFTNVYGSIVDPKQFDTKSLVKIEDDV
CVIPPNSFALAITLEYFRIPENVLTICVGKSTYARCGIIVNVTPFEPGWEGYAVLEISNTTPLPAKIYAGEGIAQVLFFE
GKEKCLYTYAARNGKYHRQMTLTLPLL

Specific function: De novo synthesis of thymidylate. [C]

COG id: COG0717

COG function: function code F; Deoxycytidine deaminase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dCTP deaminase family

Homologues:

Organism=Escherichia coli, GI1788379, Length=149, Percent_Identity=30.2013422818792, Blast_Score=68, Evalue=3e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): DCD_PARUW (Q6MCL7)

Other databases:

- EMBL:   BX908798
- RefSeq:   YP_007957.1
- ProteinModelPortal:   Q6MCL7
- SMR:   Q6MCL7
- STRING:   Q6MCL7
- GeneID:   2779737
- GenomeReviews:   BX908798_GR
- KEGG:   pcu:pc0958
- NMPDR:   fig|264201.1.peg.958
- eggNOG:   COG0717
- HOGENOM:   HBG553199
- OMA:   NITVICI
- PhylomeDB:   Q6MCL7
- ProtClustDB:   PRK00416
- BioCyc:   CPRO264201:PC0958-MONOMER
- HAMAP:   MF_00146
- InterPro:   IPR011962
- InterPro:   IPR008180
- TIGRFAMs:   TIGR02274

Pfam domain/function: PF00692 dUTPase

EC number: =3.5.4.13

Molecular weight: Translated: 21293; Mature: 21162

Theoretical pI: Translated: 5.32; Mature: 5.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.2 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
3.2 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSICSDNWIIEKCLKEKMIEPFVDKQVRFENGEKIISYGVSSYGYDIRVSNQFQIFTNVY
CCCCCCCHHHHHHHHHHHHCHHHCCEEEECCCCEEEEECCCCCCEEEEECCCEEEEEECC
GSIVDPKQFDTKSLVKIEDDVCVIPPNSFALAITLEYFRIPENVLTICVGKSTYARCGII
CCCCCCCCCCCCCEEEECCCEEEECCCCEEEEEEEEEEECCCCCEEEEECCCCHHEEEEE
VNVTPFEPGWEGYAVLEISNTTPLPAKIYAGEGIAQVLFFEGKEKCLYTYAARNGKYHRQ
EEECCCCCCCCCEEEEEECCCCCCCEEEECCCCEEEEEEECCCCEEEEEEEECCCCEEEE
MTLTLPLL
EEEEECCC
>Mature Secondary Structure 
SICSDNWIIEKCLKEKMIEPFVDKQVRFENGEKIISYGVSSYGYDIRVSNQFQIFTNVY
CCCCCCHHHHHHHHHHHHCHHHCCEEEECCCCEEEEECCCCCCEEEEECCCEEEEEECC
GSIVDPKQFDTKSLVKIEDDVCVIPPNSFALAITLEYFRIPENVLTICVGKSTYARCGII
CCCCCCCCCCCCCEEEECCCEEEECCCCEEEEEEEEEEECCCCCEEEEECCCCHHEEEEE
VNVTPFEPGWEGYAVLEISNTTPLPAKIYAGEGIAQVLFFEGKEKCLYTYAARNGKYHRQ
EEECCCCCCCCCEEEEEECCCCCCCEEEECCCCEEEEEEECCCCEEEEEEEECCCCEEEE
MTLTLPLL
EEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA