Definition Candidatus Protochlamydia amoebophila UWE25, complete genome.
Accession NC_005861
Length 2,414,465

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The map label for this gene is 46446594

Identifier: 46446594

GI number: 46446594

Start: 1156504

End: 1157508

Strand: Reverse

Name: 46446594

Synonym: pc0960

Alternate gene names: NA

Gene position: 1157508-1156504 (Counterclockwise)

Preceding gene: 46446597

Following gene: 46446592

Centisome position: 47.94

GC content: 31.84

Gene sequence:

>1005_bases
ATGAAAGCATATATGACAAATAACCTAATTCGAACGATCAGTCATTTTAAAGAAAAAGAAGAATTTAATGCTTTTTTAGA
AGCTTATAAGCAAGCAAGTGTAAACCTAGAAATTGACTCTTTTCAGCTTCATTTAAATTGGCCGTCTTTTTTAGAACTTA
TCGATTTAGAGGCATTATTTTGGTCTTTCCATCCATTAAATGAAGAAGATGCTCTTTATAGCTTTTTGCTCTCCATGTTA
AATAAAAATGACCAACAAGTATTGTTAACCTGCTTGTATGATCAAGTTTTTATCGATTGTTTGACAAAAGTAAAAAACCT
GCCTCAAATAGATCAAACGTTTCTTCTCAATCAAATTCAAAAAAAGCGAGATCTTATTCAGGTTCCTCTTGTTAAAGAAT
TATTTGCAGCTCCTTTAAATCATTATGAAAAATTATTACAAGTAGATCCTTATCATACTATTCATGATTTAACCCTCTAT
TTAGCTTGGGACCGTGTATGTATCAATCTCGCTGTGATCTTTGAGCATCCTTCTTTTAAATCTGTTGACGGATTGACTAC
ATTGAAAGAATGCCTTATAGAGTCTTTTCAACATATTACGAAACAAGGAGAAACAGCCCCTGGTTTTTTTCGATTCATGG
AAGCTTTGTATGCTATTTTAATGCGAGAGGAAAATTTACCAATTCACTCGGAAGAAGAGTGGTTAATTCTTTGCCAAAGT
GCAGAAGCCCTGAGATCGCGAGAGGTTGTTTGCGATGCTCCTTATATCGATAAAATCCTAGTTGATAAATATTCAAATTC
GAAAAAGCGTGCACAATTAATTCTAACGCTCGATTCTATAGAAAAAGTAAACGCTAGTTTAAAACTTGCTGAATTTGAAA
TTAAAAAATTAAATCAAGAGAAAATGGCTTGGAACTATTCTTTAGCACCAGTTGAAATTGTGTGTTTCAAACAAGAGGAT
CAAAAACTTCTTTTTAATACAATTATTAGACAAGAATATTTTTAA

Upstream 100 bases:

>100_bases
TAAAACATTAAAAAAAATACCGAGCGAAATTTTCTATTTTTGTTTTCATAATCTGTAGAATAAAAATAGAATGGAGTGAA
TGGAAAACAACAGGGTTTTT

Downstream 100 bases:

>100_bases
TTTTCATGAGTTTGATGCTCAATTAATTCTATTTTTTGTTGACGATTCATTTTTTTTATAGAAATCTCCCGTTTAGTAGC
CTCAGATCGATTAAGTTGTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 334; Mature: 334

Protein sequence:

>334_residues
MKAYMTNNLIRTISHFKEKEEFNAFLEAYKQASVNLEIDSFQLHLNWPSFLELIDLEALFWSFHPLNEEDALYSFLLSML
NKNDQQVLLTCLYDQVFIDCLTKVKNLPQIDQTFLLNQIQKKRDLIQVPLVKELFAAPLNHYEKLLQVDPYHTIHDLTLY
LAWDRVCINLAVIFEHPSFKSVDGLTTLKECLIESFQHITKQGETAPGFFRFMEALYAILMREENLPIHSEEEWLILCQS
AEALRSREVVCDAPYIDKILVDKYSNSKKRAQLILTLDSIEKVNASLKLAEFEIKKLNQEKMAWNYSLAPVEIVCFKQED
QKLLFNTIIRQEYF

Sequences:

>Translated_334_residues
MKAYMTNNLIRTISHFKEKEEFNAFLEAYKQASVNLEIDSFQLHLNWPSFLELIDLEALFWSFHPLNEEDALYSFLLSML
NKNDQQVLLTCLYDQVFIDCLTKVKNLPQIDQTFLLNQIQKKRDLIQVPLVKELFAAPLNHYEKLLQVDPYHTIHDLTLY
LAWDRVCINLAVIFEHPSFKSVDGLTTLKECLIESFQHITKQGETAPGFFRFMEALYAILMREENLPIHSEEEWLILCQS
AEALRSREVVCDAPYIDKILVDKYSNSKKRAQLILTLDSIEKVNASLKLAEFEIKKLNQEKMAWNYSLAPVEIVCFKQED
QKLLFNTIIRQEYF
>Mature_334_residues
MKAYMTNNLIRTISHFKEKEEFNAFLEAYKQASVNLEIDSFQLHLNWPSFLELIDLEALFWSFHPLNEEDALYSFLLSML
NKNDQQVLLTCLYDQVFIDCLTKVKNLPQIDQTFLLNQIQKKRDLIQVPLVKELFAAPLNHYEKLLQVDPYHTIHDLTLY
LAWDRVCINLAVIFEHPSFKSVDGLTTLKECLIESFQHITKQGETAPGFFRFMEALYAILMREENLPIHSEEEWLILCQS
AEALRSREVVCDAPYIDKILVDKYSNSKKRAQLILTLDSIEKVNASLKLAEFEIKKLNQEKMAWNYSLAPVEIVCFKQED
QKLLFNTIIRQEYF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 39244; Mature: 39244

Theoretical pI: Translated: 5.04; Mature: 5.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKAYMTNNLIRTISHFKEKEEFNAFLEAYKQASVNLEIDSFQLHLNWPSFLELIDLEALF
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEEECCHHHHHHHHHHHHH
WSFHPLNEEDALYSFLLSMLNKNDQQVLLTCLYDQVFIDCLTKVKNLPQIDQTFLLNQIQ
HHCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
KKRDLIQVPLVKELFAAPLNHYEKLLQVDPYHTIHDLTLYLAWDRVCINLAVIFEHPSFK
HHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHEEEEEEEECCCCC
SVDGLTTLKECLIESFQHITKQGETAPGFFRFMEALYAILMREENLPIHSEEEWLILCQS
CCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECC
AEALRSREVVCDAPYIDKILVDKYSNSKKRAQLILTLDSIEKVNASLKLAEFEIKKLNQE
HHHHHCCCCEECCCHHHHHHHHHCCCCCCCEEEEEEEHHHHHHCCHHHHHHHHHHHCCHH
KMAWNYSLAPVEIVCFKQEDQKLLFNTIIRQEYF
HHHEECCCCCEEEEEECCCCHHHHHHHHHHHCCC
>Mature Secondary Structure
MKAYMTNNLIRTISHFKEKEEFNAFLEAYKQASVNLEIDSFQLHLNWPSFLELIDLEALF
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEEECCHHHHHHHHHHHHH
WSFHPLNEEDALYSFLLSMLNKNDQQVLLTCLYDQVFIDCLTKVKNLPQIDQTFLLNQIQ
HHCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
KKRDLIQVPLVKELFAAPLNHYEKLLQVDPYHTIHDLTLYLAWDRVCINLAVIFEHPSFK
HHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHEEEEEEEECCCCC
SVDGLTTLKECLIESFQHITKQGETAPGFFRFMEALYAILMREENLPIHSEEEWLILCQS
CCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECC
AEALRSREVVCDAPYIDKILVDKYSNSKKRAQLILTLDSIEKVNASLKLAEFEIKKLNQE
HHHHHCCCCEECCCHHHHHHHHHCCCCCCCEEEEEEEHHHHHHCCHHHHHHHHHHHCCHH
KMAWNYSLAPVEIVCFKQEDQKLLFNTIIRQEYF
HHHEECCCCCEEEEEECCCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA