| Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
|---|---|
| Accession | NC_005861 |
| Length | 2,414,465 |
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The map label for this gene is 46446563
Identifier: 46446563
GI number: 46446563
Start: 1121797
End: 1122255
Strand: Direct
Name: 46446563
Synonym: pc0929
Alternate gene names: NA
Gene position: 1121797-1122255 (Clockwise)
Preceding gene: 46446557
Following gene: 46446573
Centisome position: 46.46
GC content: 34.64
Gene sequence:
>459_bases ATGAAGCACTCCTCCTCATTACCTTGGTATAAAAAAGGACTTCACTTTAGTTGCACAGAGTGCGGAAAATGTTGCACTGG GGCACCTGGTTTTGTGCTTATCAGTGAGCAAGAAATCCAAGAGATGGCACATTTTTTAGAAATTTCAGTCAAAAATTTTA AAAAATTGTATATCAAAAAAAGAAATAATCAAACTTTTTTAATTGAAAAAAAATCTCCTGAAGGCTATTCGTGTGTATTT TTTCGAGATAAAAAATGTACTGTTTATTCAGCCAGACCGTCTCAATGCCGTTTATATCCTTTTTGGCCTGAAAATCTCCT TTCTCGACAAACATGGGAGCAAGCAGCAAATTTTTGTGAAGGAATTACCTGTAAGGGGGCTGTATTCTCACAAGAAAAAA TTGATGAAATGAAAGAGATTCAAATGCAGACTAATGAGCATTATGTAGTGAATGAATGA
Upstream 100 bases:
>100_bases TGCAAATATTTATTATTATTTAGTAAAGTTAAACAGAAATGATAGTTAAATCTACATTTTAACTAGTTAAATATACAAAT TTAAAAATAATTAAATTCTT
Downstream 100 bases:
>100_bases GCTACCAAGCTATCTAAGTTATTTATGTCCTTGCTAAAATCAATTGAGCTTCTTTTTCATCGATGAGAACAAATTGATTA AAATCTTCTTTATAACAATA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 152; Mature: 152
Protein sequence:
>152_residues MKHSSSLPWYKKGLHFSCTECGKCCTGAPGFVLISEQEIQEMAHFLEISVKNFKKLYIKKRNNQTFLIEKKSPEGYSCVF FRDKKCTVYSARPSQCRLYPFWPENLLSRQTWEQAANFCEGITCKGAVFSQEKIDEMKEIQMQTNEHYVVNE
Sequences:
>Translated_152_residues MKHSSSLPWYKKGLHFSCTECGKCCTGAPGFVLISEQEIQEMAHFLEISVKNFKKLYIKKRNNQTFLIEKKSPEGYSCVF FRDKKCTVYSARPSQCRLYPFWPENLLSRQTWEQAANFCEGITCKGAVFSQEKIDEMKEIQMQTNEHYVVNE >Mature_152_residues MKHSSSLPWYKKGLHFSCTECGKCCTGAPGFVLISEQEIQEMAHFLEISVKNFKKLYIKKRNNQTFLIEKKSPEGYSCVF FRDKKCTVYSARPSQCRLYPFWPENLLSRQTWEQAANFCEGITCKGAVFSQEKIDEMKEIQMQTNEHYVVNE
Specific function: Unknown
COG id: COG0727
COG function: function code R; Predicted Fe-S-cluster oxidoreductase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To M.jannaschii MJ0661 [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005358 [H]
Pfam domain/function: PF03692 UPF0153 [H]
EC number: NA
Molecular weight: Translated: 17759; Mature: 17759
Theoretical pI: Translated: 8.32; Mature: 8.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.9 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 8.6 %Cys+Met (Translated Protein) 5.9 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 8.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKHSSSLPWYKKGLHFSCTECGKCCTGAPGFVLISEQEIQEMAHFLEISVKNFKKLYIKK CCCCCCCCHHHCCCCCCCHHHCCCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHEEEEEE RNNQTFLIEKKSPEGYSCVFFRDKKCTVYSARPSQCRLYPFWPENLLSRQTWEQAANFCE CCCCEEEEEECCCCCEEEEEEECCCEEEEECCCCCEEEEECCCHHHHHHHHHHHHHHHHC GITCKGAVFSQEKIDEMKEIQMQTNEHYVVNE CCCCCCCCCCHHHHHHHHHHHHCCCCEEEECC >Mature Secondary Structure MKHSSSLPWYKKGLHFSCTECGKCCTGAPGFVLISEQEIQEMAHFLEISVKNFKKLYIKK CCCCCCCCHHHCCCCCCCHHHCCCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHEEEEEE RNNQTFLIEKKSPEGYSCVFFRDKKCTVYSARPSQCRLYPFWPENLLSRQTWEQAANFCE CCCCEEEEEECCCCCEEEEEEECCCEEEEECCCCCEEEEECCCHHHHHHHHHHHHHHHHC GITCKGAVFSQEKIDEMKEIQMQTNEHYVVNE CCCCCCCCCCHHHHHHHHHHHHCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9923682 [H]