Click here to switch to the map view.

The map label for this gene is 46446557

Identifier: 46446557

GI number: 46446557

Start: 1116610

End: 1117467

Strand: Direct

Name: 46446557

Synonym: pc0923

Alternate gene names: NA

Gene position: 1116610-1117467 (Clockwise)

Preceding gene: 46446556

Following gene: 46446563

Centisome position: 46.25

GC content: 32.87

Gene sequence:

>858_bases
ATGCGTAAAGAGCCTCTCAATTTATCTCATCAAACTCTTTTAACGCAAAAATTTCGGCAGATGAGTTTAGTAATTTCTGA
ATATTCTTTCGCAAATCTTTATTTGTTTAGAAAACAACATGAATATGAAGTTATTTTTGGAGAAGATATTTACATAAAAG
GAATTGATCGAGGAAAACTCCCTTTTATGATGCTGACTTCAATCCCTCATCCCAAAGTTTCATCTGAAATTATTTTTTTC
TTAAATACAGGCTATTTCTTATTTCCCATTCCAGAAGAATGGAATCTTTTATTTGACTTTCCATTGGATTTTAGCTTTGA
AGATGCAGACTCTGATTATTTATTTAAAGTTGAAAAACTAGCTTTTTTTTCAGGAAGGCACCTAAGCAAAAAAAGAAATT
TAGTCAAGCAACTATTCGATCGATATCAAATTAAAACGGCCCAACTAACACAAAAAAACAAAAGCGATGCTTTAAAAATT
TTAGTCAATTGGCAAGATCAACAAACTCAACAGGAACAGACAGACTATTTTTCGTGTCTAGAAGCTATTAAATTGCTAGA
ATGTTTAAATTTAGAAGGAGTTATCATTTATATAGATGGCAAACCTGCAGGTTTTACCATTGGAGAATATCTCACACCAA
CCTGTTTTGTGATTCATTTTGCTAAAGGGGATGCTAACATTCATGGCCTTTATCAATATCTTTATCAATATCAAGCCCAA
ATACTATCTAAACAAACAGAGTGGATCAACCTAGAACAAGATCTCGGATTACCTTTTTTAAGGCAGGCTAAACATTCCTA
TGTGCCAGACCGAATGATCCTTAAACAACGCGCTAGGGATAAGAATAAAGAAGCCTAG

Upstream 100 bases:

>100_bases
ACAACCCGATTTCACTTATAAAAGTGAGATAGAAACTTTTCGTGTTGTTGTTGATAAGGTCGGTATTAAACGAGTCGAAC
AAATTAACCAAAATTAATCC

Downstream 100 bases:

>100_bases
TCAGTTTTTTTAAATCCTATTGATAAAGAATGACAAGGAATGTTAAACAAATCCTTGTCACTCATCAAAATAAATTAAAA
AAACTTTTGCGAGTTGCTTA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 285; Mature: 285

Protein sequence:

>285_residues
MRKEPLNLSHQTLLTQKFRQMSLVISEYSFANLYLFRKQHEYEVIFGEDIYIKGIDRGKLPFMMLTSIPHPKVSSEIIFF
LNTGYFLFPIPEEWNLLFDFPLDFSFEDADSDYLFKVEKLAFFSGRHLSKKRNLVKQLFDRYQIKTAQLTQKNKSDALKI
LVNWQDQQTQQEQTDYFSCLEAIKLLECLNLEGVIIYIDGKPAGFTIGEYLTPTCFVIHFAKGDANIHGLYQYLYQYQAQ
ILSKQTEWINLEQDLGLPFLRQAKHSYVPDRMILKQRARDKNKEA

Sequences:

>Translated_285_residues
MRKEPLNLSHQTLLTQKFRQMSLVISEYSFANLYLFRKQHEYEVIFGEDIYIKGIDRGKLPFMMLTSIPHPKVSSEIIFF
LNTGYFLFPIPEEWNLLFDFPLDFSFEDADSDYLFKVEKLAFFSGRHLSKKRNLVKQLFDRYQIKTAQLTQKNKSDALKI
LVNWQDQQTQQEQTDYFSCLEAIKLLECLNLEGVIIYIDGKPAGFTIGEYLTPTCFVIHFAKGDANIHGLYQYLYQYQAQ
ILSKQTEWINLEQDLGLPFLRQAKHSYVPDRMILKQRARDKNKEA
>Mature_285_residues
MRKEPLNLSHQTLLTQKFRQMSLVISEYSFANLYLFRKQHEYEVIFGEDIYIKGIDRGKLPFMMLTSIPHPKVSSEIIFF
LNTGYFLFPIPEEWNLLFDFPLDFSFEDADSDYLFKVEKLAFFSGRHLSKKRNLVKQLFDRYQIKTAQLTQKNKSDALKI
LVNWQDQQTQQEQTDYFSCLEAIKLLECLNLEGVIIYIDGKPAGFTIGEYLTPTCFVIHFAKGDANIHGLYQYLYQYQAQ
ILSKQTEWINLEQDLGLPFLRQAKHSYVPDRMILKQRARDKNKEA

Specific function: Unknown

COG id: COG4866

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33632; Mature: 33632

Theoretical pI: Translated: 7.62; Mature: 7.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKEPLNLSHQTLLTQKFRQMSLVISEYSFANLYLFRKQHEYEVIFGEDIYIKGIDRGKL
CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCEEEEECCEEEEEECCCCCC
PFMMLTSIPHPKVSSEIIFFLNTGYFLFPIPEEWNLLFDFPLDFSFEDADSDYLFKVEKL
CEEEEECCCCCCCCCCEEEEEECCEEEEECCCCCCEEEECCCCCCCCCCCCCCEEEEHHH
AFFSGRHLSKKRNLVKQLFDRYQIKTAQLTQKNKSDALKILVNWQDQQTQQEQTDYFSCL
HHHCCCCHHHHHHHHHHHHHHHHCHHHHHHHCCCCCEEEEEEECCCHHHHHHHHHHHHHH
EAIKLLECLNLEGVIIYIDGKPAGFTIGEYLTPTCFVIHFAKGDANIHGLYQYLYQYQAQ
HHHHHHHHCCCCEEEEEECCCCCCEEHHHHCCCEEEEEEEECCCCCHHHHHHHHHHHHHH
ILSKQTEWINLEQDLGLPFLRQAKHSYVPDRMILKQRARDKNKEA
HHHCCCCEEECHHHCCCHHHHHHHHCCCCHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MRKEPLNLSHQTLLTQKFRQMSLVISEYSFANLYLFRKQHEYEVIFGEDIYIKGIDRGKL
CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCEEEEECCEEEEEECCCCCC
PFMMLTSIPHPKVSSEIIFFLNTGYFLFPIPEEWNLLFDFPLDFSFEDADSDYLFKVEKL
CEEEEECCCCCCCCCCEEEEEECCEEEEECCCCCCEEEECCCCCCCCCCCCCCEEEEHHH
AFFSGRHLSKKRNLVKQLFDRYQIKTAQLTQKNKSDALKILVNWQDQQTQQEQTDYFSCL
HHHCCCCHHHHHHHHHHHHHHHHCHHHHHHHCCCCCEEEEEEECCCHHHHHHHHHHHHHH
EAIKLLECLNLEGVIIYIDGKPAGFTIGEYLTPTCFVIHFAKGDANIHGLYQYLYQYQAQ
HHHHHHHHCCCCEEEEEECCCCCCEEHHHHCCCEEEEEEEECCCCCHHHHHHHHHHHHHH
ILSKQTEWINLEQDLGLPFLRQAKHSYVPDRMILKQRARDKNKEA
HHHCCCCEEECHHHCCCHHHHHHHHCCCCHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA