| Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
|---|---|
| Accession | NC_005861 |
| Length | 2,414,465 |
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The map label for this gene is 46446541
Identifier: 46446541
GI number: 46446541
Start: 1098715
End: 1100529
Strand: Reverse
Name: 46446541
Synonym: pc0907
Alternate gene names: NA
Gene position: 1100529-1098715 (Counterclockwise)
Preceding gene: 46446542
Following gene: 46446539
Centisome position: 45.58
GC content: 33.44
Gene sequence:
>1815_bases ATGAAAATATTTCATCATTCCAAGCGCATTTTTATTTTGTTAAAAGATTGTATTTATCCTCTTTTCAATTACTTAAGACA AGGATATCGATCAAATCTGCTCAAAGTTCATTGGGCTAGTTTTGCAAAACACAGCTTCCGTCATCTTCAATCACTAGGAG CAGCTTTAAATAAAGAGTGTCGTGATTTAGGAGATTTACAGGGCCCTCGAATAAAAAAGCTTCGCCAATTGACTATTGGT CTGCATACTTTAATGTCTTCCTCTGAACCTTCATTTTCTTATTCAATTTTAATTCCTGTTTCAGATTCACTAAGAAAAAA TTGTTTTTGCAAAGCTCTTTTTTCTGCTCTCCAACAAACAGCACCTAACTTCGAAATTTTGGTTGGTTATAACAAGGAGC AACAAACTAAAGAAATTGAGACACTAATTAAAGGATATCAAAATGAATATCCTCAATTAATTAAAACATTTTCATTTTCT GATCATTCTCTCACACAGATTTTAAACTCTCTAGCACAATTTGCTGAAGGGAATTTCCTTTTTGTTTTAGACCCTGAAGA TTGGATTCGACCAGATTTTTTCTTCCGGTGCGAACAATTTTTAAGACTCATAAAAGAAAAGGAGAATGGGTGTATTTATA CAGATGAATATGAAATCACCGAAAACGATGATCCCATTCCAGGGAGGCTCTTTTCTAAACCAAACGAATTAGTTTTTCCT TATCTTTTTCATCAAGCTTTAGGGAGCAGTGTCTTAATTCCACGTCAATTATGGAATAGAGCTGGAGGAATGGAAGAAAT TAATAAAGAGGAATTATATTGGGATTTGGCTTTAAGATTAGATTTAGCTGGGGCAAAATTCTACCATCTACCTTTTTATC TATATGCGAAGCGTTGTATAAATCCCCACTTTCAACCAAAAGCAGCATCTCTTTTATTTGTCAAACAATTAGAAAAATAT AGCTTAGCAAAAAAATTAACATGGTCATGGGGTAAAGGATTAATTTCCCAAACCTACCGAGCTATTCCAGCTTTAACCGC TGTTCCAAAAGTTCAAGTAATCATCCCTTTTAAAAATCAAAAAATTCTGACTTTAAAAACGATCCATAGTATTTTGAAGC AAAAAAATGTTCAAGTCTTTGTGACAGCTATTGATAACGACAGTCAAGATGAAACAATTGCTTCAGAAATTCGAAAATTG GGTAGTGAAGTAATTATTGTTAAAGAACCTTTCAACTATTCGAGATTAAATAATATTGCTGTTGAGAGAACTATTTATGC CAAGAATTGCGATTATCTTCTCTTTCTTAATAATGACGTAGAACTTGAAGAAGATGCCTTAGAGGAAATGTGCCGATGGA TTGATCAACCTATGATTGGAATGGTGGGATGTCAACTGCATTATCCTAATGGGTTATTACAGCATGGGGGAATTGACATT AAACGCGATGCACCAGCTAATCAATTAATGTGGATTAACTCAGAAAAACTTGCTCCAAAAACGAATCAAAAAATGACAAA AATCATTCGTTTAGTGGATGCTGTCACCGCAGCTTGCTCACTAATGAAAAAAACTTTATTTGTAGAAGTCGGAGGATTTG ATGAAATATGGTACCCGATTGCTTACAGCGATACTAATTTAGCAACTAAAGTTAAATCTAAAGGTTTTTATTGTTTATAT ACTCCTTATGCAAAAGGAATCCACCACGAAAGTGCTTCACGTAAATTTGAAAATATTGAAGATGTGGAAATGTCTAGCTG GCTTGATAAGCAATTTTTTGAAAATTATTCGCTGAAGAAACAATCAAAAATTTAA
Upstream 100 bases:
>100_bases ATGCGCTAATCAATTAAACAATTGATTAAGGCAAATCTAAACTTTCTGCATTAAATAGCTTTATGTTATTTTCCAATATT CCATATTACAAAGAACCATC
Downstream 100 bases:
>100_bases TTATTCATTCTTTTCTATCTCCATTTATTGAACATTTTCCTTAAAATAATTTTGGCTGTATTTTTAAAGCCTTTTTCATA AACTTGATGGATAACAAAAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 604; Mature: 604
Protein sequence:
>604_residues MKIFHHSKRIFILLKDCIYPLFNYLRQGYRSNLLKVHWASFAKHSFRHLQSLGAALNKECRDLGDLQGPRIKKLRQLTIG LHTLMSSSEPSFSYSILIPVSDSLRKNCFCKALFSALQQTAPNFEILVGYNKEQQTKEIETLIKGYQNEYPQLIKTFSFS DHSLTQILNSLAQFAEGNFLFVLDPEDWIRPDFFFRCEQFLRLIKEKENGCIYTDEYEITENDDPIPGRLFSKPNELVFP YLFHQALGSSVLIPRQLWNRAGGMEEINKEELYWDLALRLDLAGAKFYHLPFYLYAKRCINPHFQPKAASLLFVKQLEKY SLAKKLTWSWGKGLISQTYRAIPALTAVPKVQVIIPFKNQKILTLKTIHSILKQKNVQVFVTAIDNDSQDETIASEIRKL GSEVIIVKEPFNYSRLNNIAVERTIYAKNCDYLLFLNNDVELEEDALEEMCRWIDQPMIGMVGCQLHYPNGLLQHGGIDI KRDAPANQLMWINSEKLAPKTNQKMTKIIRLVDAVTAACSLMKKTLFVEVGGFDEIWYPIAYSDTNLATKVKSKGFYCLY TPYAKGIHHESASRKFENIEDVEMSSWLDKQFFENYSLKKQSKI
Sequences:
>Translated_604_residues MKIFHHSKRIFILLKDCIYPLFNYLRQGYRSNLLKVHWASFAKHSFRHLQSLGAALNKECRDLGDLQGPRIKKLRQLTIG LHTLMSSSEPSFSYSILIPVSDSLRKNCFCKALFSALQQTAPNFEILVGYNKEQQTKEIETLIKGYQNEYPQLIKTFSFS DHSLTQILNSLAQFAEGNFLFVLDPEDWIRPDFFFRCEQFLRLIKEKENGCIYTDEYEITENDDPIPGRLFSKPNELVFP YLFHQALGSSVLIPRQLWNRAGGMEEINKEELYWDLALRLDLAGAKFYHLPFYLYAKRCINPHFQPKAASLLFVKQLEKY SLAKKLTWSWGKGLISQTYRAIPALTAVPKVQVIIPFKNQKILTLKTIHSILKQKNVQVFVTAIDNDSQDETIASEIRKL GSEVIIVKEPFNYSRLNNIAVERTIYAKNCDYLLFLNNDVELEEDALEEMCRWIDQPMIGMVGCQLHYPNGLLQHGGIDI KRDAPANQLMWINSEKLAPKTNQKMTKIIRLVDAVTAACSLMKKTLFVEVGGFDEIWYPIAYSDTNLATKVKSKGFYCLY TPYAKGIHHESASRKFENIEDVEMSSWLDKQFFENYSLKKQSKI >Mature_604_residues MKIFHHSKRIFILLKDCIYPLFNYLRQGYRSNLLKVHWASFAKHSFRHLQSLGAALNKECRDLGDLQGPRIKKLRQLTIG LHTLMSSSEPSFSYSILIPVSDSLRKNCFCKALFSALQQTAPNFEILVGYNKEQQTKEIETLIKGYQNEYPQLIKTFSFS DHSLTQILNSLAQFAEGNFLFVLDPEDWIRPDFFFRCEQFLRLIKEKENGCIYTDEYEITENDDPIPGRLFSKPNELVFP YLFHQALGSSVLIPRQLWNRAGGMEEINKEELYWDLALRLDLAGAKFYHLPFYLYAKRCINPHFQPKAASLLFVKQLEKY SLAKKLTWSWGKGLISQTYRAIPALTAVPKVQVIIPFKNQKILTLKTIHSILKQKNVQVFVTAIDNDSQDETIASEIRKL GSEVIIVKEPFNYSRLNNIAVERTIYAKNCDYLLFLNNDVELEEDALEEMCRWIDQPMIGMVGCQLHYPNGLLQHGGIDI KRDAPANQLMWINSEKLAPKTNQKMTKIIRLVDAVTAACSLMKKTLFVEVGGFDEIWYPIAYSDTNLATKVKSKGFYCLY TPYAKGIHHESASRKFENIEDVEMSSWLDKQFFENYSLKKQSKI
Specific function: Unknown
COG id: COG1216
COG function: function code R; Predicted glycosyltransferases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001173 [H]
Pfam domain/function: PF00535 Glycos_transf_2 [H]
EC number: NA
Molecular weight: Translated: 69900; Mature: 69900
Theoretical pI: Translated: 8.68; Mature: 8.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIFHHSKRIFILLKDCIYPLFNYLRQGYRSNLLKVHWASFAKHSFRHLQSLGAALNKEC CCCEECCCEEEEEHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHHHHH RDLGDLQGPRIKKLRQLTIGLHTLMSSSEPSFSYSILIPVSDSLRKNCFCKALFSALQQT HHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCHHHHHHHHHHHHHHHHHHC APNFEILVGYNKEQQTKEIETLIKGYQNEYPQLIKTFSFSDHSLTQILNSLAQFAEGNFL CCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCEE FVLDPEDWIRPDFFFRCEQFLRLIKEKENGCIYTDEYEITENDDPIPGRLFSKPNELVFP EEECCHHHCCCHHHHHHHHHHHHHHHCCCCCEEECCEEECCCCCCCCCHHCCCCCCCHHH YLFHQALGSSVLIPRQLWNRAGGMEEINKEELYWDLALRLDLAGAKFYHLPFYLYAKRCI HHHHHHCCCCCEEHHHHHHHCCCHHHCCHHHHEEEEEEEEEECCCEEEECHHHHHHHHHC NPHFQPKAASLLFVKQLEKYSLAKKLTWSWGKGLISQTYRAIPALTAVPKVQVIIPFKNQ CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCC KILTLKTIHSILKQKNVQVFVTAIDNDSQDETIASEIRKLGSEVIIVKEPFNYSRLNNIA EEEEHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHCCCCEEEEECCCCHHHHHCCC VERTIYAKNCDYLLFLNNDVELEEDALEEMCRWIDQPMIGMVGCQLHYPNGLLQHGGIDI EEEEEEECCCCEEEEECCCCCCCHHHHHHHHHHHCCCCHHHEEEEEECCCCHHHCCCEEE KRDAPANQLMWINSEKLAPKTNQKMTKIIRLVDAVTAACSLMKKTLFVEVGGFDEIWYPI ECCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCEEEEE AYSDTNLATKVKSKGFYCLYTPYAKGIHHESASRKFENIEDVEMSSWLDKQFFENYSLKK EECCCCHHHHHHCCCEEEEECHHHCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHCCCCCH QSKI HCCC >Mature Secondary Structure MKIFHHSKRIFILLKDCIYPLFNYLRQGYRSNLLKVHWASFAKHSFRHLQSLGAALNKEC CCCEECCCEEEEEHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHHHHH RDLGDLQGPRIKKLRQLTIGLHTLMSSSEPSFSYSILIPVSDSLRKNCFCKALFSALQQT HHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCHHHHHHHHHHHHHHHHHHC APNFEILVGYNKEQQTKEIETLIKGYQNEYPQLIKTFSFSDHSLTQILNSLAQFAEGNFL CCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCEE FVLDPEDWIRPDFFFRCEQFLRLIKEKENGCIYTDEYEITENDDPIPGRLFSKPNELVFP EEECCHHHCCCHHHHHHHHHHHHHHHCCCCCEEECCEEECCCCCCCCCHHCCCCCCCHHH YLFHQALGSSVLIPRQLWNRAGGMEEINKEELYWDLALRLDLAGAKFYHLPFYLYAKRCI HHHHHHCCCCCEEHHHHHHHCCCHHHCCHHHHEEEEEEEEEECCCEEEECHHHHHHHHHC NPHFQPKAASLLFVKQLEKYSLAKKLTWSWGKGLISQTYRAIPALTAVPKVQVIIPFKNQ CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCC KILTLKTIHSILKQKNVQVFVTAIDNDSQDETIASEIRKLGSEVIIVKEPFNYSRLNNIA EEEEHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHCCCCEEEEECCCCHHHHHCCC VERTIYAKNCDYLLFLNNDVELEEDALEEMCRWIDQPMIGMVGCQLHYPNGLLQHGGIDI EEEEEEECCCCEEEEECCCCCCCHHHHHHHHHHHCCCCHHHEEEEEECCCCHHHCCCEEE KRDAPANQLMWINSEKLAPKTNQKMTKIIRLVDAVTAACSLMKKTLFVEVGGFDEIWYPI ECCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCEEEEE AYSDTNLATKVKSKGFYCLYTPYAKGIHHESASRKFENIEDVEMSSWLDKQFFENYSLKK EECCCCHHHHHHCCCEEEEECHHHCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHCCCCCH QSKI HCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9163424 [H]